Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02202 and ECD_02203 are separated by 230 nucleotides ECD_02203 and ECD_02204 overlap by 4 nucleotides ECD_02204 and ECD_02205 overlap by 4 nucleotides ECD_02205 and ECD_02206 are separated by 11 nucleotides
ECD_02202: ECD_02202 - NADH:ubiquinone oxidoreductase, membrane subunit M, at 2,278,697 to 2,280,226
_02202
ECD_02203: ECD_02203 - NADH:ubiquinone oxidoreductase, membrane subunit L, at 2,280,457 to 2,282,298
_02203
ECD_02204: ECD_02204 - NADH:ubiquinone oxidoreductase, membrane subunit K, at 2,282,295 to 2,282,597
_02204
ECD_02205: ECD_02205 - NADH:ubiquinone oxidoreductase, membrane subunit J, at 2,282,594 to 2,283,148
_02205
ECD_02206: ECD_02206 - NADH:ubiquinone oxidoreductase, chain I, at 2,283,160 to 2,283,702
_02206
Position (kb)
2280
2281
2282
2283 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2279.565 kb on + strand, within ECD_02202 at 2279.566 kb on - strand, within ECD_02202 at 2279.590 kb on + strand, within ECD_02202 at 2279.591 kb on - strand, within ECD_02202 at 2279.637 kb on + strand, within ECD_02202 at 2279.749 kb on + strand, within ECD_02202 at 2279.749 kb on + strand, within ECD_02202 at 2279.775 kb on + strand, within ECD_02202 at 2279.776 kb on - strand, within ECD_02202 at 2279.776 kb on - strand, within ECD_02202 at 2279.992 kb on + strand, within ECD_02202 at 2279.993 kb on - strand, within ECD_02202 at 2280.204 kb on - strand at 2280.207 kb on - strand at 2280.207 kb on - strand at 2280.222 kb on - strand at 2280.226 kb on + strand at 2280.226 kb on + strand at 2280.226 kb on + strand at 2280.227 kb on - strand at 2280.227 kb on - strand at 2280.227 kb on - strand at 2280.227 kb on - strand at 2280.227 kb on - strand at 2280.230 kb on + strand at 2280.230 kb on + strand at 2280.230 kb on + strand at 2280.231 kb on - strand at 2280.231 kb on - strand at 2280.234 kb on + strand at 2280.234 kb on + strand at 2280.235 kb on - strand at 2280.235 kb on - strand at 2280.244 kb on - strand at 2280.245 kb on + strand at 2280.245 kb on + strand at 2280.246 kb on - strand at 2280.249 kb on + strand at 2280.249 kb on + strand at 2280.249 kb on + strand at 2280.312 kb on - strand at 2280.312 kb on - strand at 2280.312 kb on - strand at 2280.315 kb on + strand at 2280.316 kb on - strand at 2280.316 kb on - strand at 2280.316 kb on - strand at 2280.376 kb on + strand at 2280.436 kb on + strand at 2280.438 kb on + strand at 2280.558 kb on + strand at 2280.703 kb on - strand, within ECD_02203 at 2280.750 kb on + strand, within ECD_02203 at 2280.751 kb on - strand, within ECD_02203 at 2281.017 kb on - strand, within ECD_02203 at 2281.066 kb on - strand, within ECD_02203 at 2281.105 kb on - strand, within ECD_02203 at 2281.346 kb on + strand, within ECD_02203 at 2281.366 kb on - strand, within ECD_02203 at 2281.734 kb on - strand, within ECD_02203 at 2281.827 kb on - strand, within ECD_02203 at 2281.829 kb on + strand, within ECD_02203 at 2281.881 kb on - strand, within ECD_02203 at 2281.881 kb on - strand, within ECD_02203 at 2281.980 kb on + strand, within ECD_02203 at 2281.982 kb on + strand, within ECD_02203 at 2281.982 kb on + strand, within ECD_02203 at 2281.983 kb on - strand, within ECD_02203 at 2281.983 kb on - strand, within ECD_02203 at 2281.983 kb on - strand, within ECD_02203 at 2281.995 kb on - strand, within ECD_02203 at 2282.067 kb on + strand, within ECD_02203 at 2282.121 kb on - strand at 2282.121 kb on - strand at 2282.414 kb on - strand, within ECD_02204 at 2282.414 kb on - strand, within ECD_02204 at 2282.713 kb on + strand, within ECD_02205 at 2282.713 kb on + strand, within ECD_02205 at 2282.713 kb on + strand, within ECD_02205 at 2282.714 kb on - strand, within ECD_02205 at 2282.714 kb on - strand, within ECD_02205 at 2282.755 kb on + strand, within ECD_02205 at 2282.759 kb on - strand, within ECD_02205 at 2282.771 kb on - strand, within ECD_02205 at 2283.004 kb on - strand, within ECD_02205 at 2283.050 kb on - strand, within ECD_02205 at 2283.110 kb on + strand at 2283.131 kb on - strand at 2283.258 kb on + strand, within ECD_02206 at 2283.261 kb on - strand, within ECD_02206
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,279,565 + ECD_02202 0.57 -1.5 2,279,566 - ECD_02202 0.57 -0.7 2,279,590 + ECD_02202 0.58 -1.7 2,279,591 - ECD_02202 0.58 +0.1 2,279,637 + ECD_02202 0.61 +0.2 2,279,749 + ECD_02202 0.69 +1.1 2,279,749 + ECD_02202 0.69 -2.7 2,279,775 + ECD_02202 0.70 -1.7 2,279,776 - ECD_02202 0.71 -2.0 2,279,776 - ECD_02202 0.71 -1.6 2,279,992 + ECD_02202 0.85 -2.5 2,279,993 - ECD_02202 0.85 -0.3 2,280,204 - -0.5 2,280,207 - -0.8 2,280,207 - -0.5 2,280,222 - +0.0 2,280,226 + -2.3 2,280,226 + -1.8 2,280,226 + -0.7 2,280,227 - -2.7 2,280,227 - -2.0 2,280,227 - -1.7 2,280,227 - -1.8 2,280,227 - -2.3 2,280,230 + -0.3 2,280,230 + -1.2 2,280,230 + +0.1 2,280,231 - -1.0 2,280,231 - -1.2 2,280,234 + -1.0 2,280,234 + -0.5 2,280,235 - -3.5 2,280,235 - -1.3 2,280,244 - -2.3 2,280,245 + -1.5 2,280,245 + -1.5 2,280,246 - -1.1 2,280,249 + -0.9 2,280,249 + -0.6 2,280,249 + -1.3 2,280,312 - -2.4 2,280,312 - -1.1 2,280,312 - -1.3 2,280,315 + -0.5 2,280,316 - -0.9 2,280,316 - -0.7 2,280,316 - -1.3 2,280,376 + +0.5 2,280,436 + -1.8 2,280,438 + -2.2 2,280,558 + +0.1 2,280,703 - ECD_02203 0.13 -0.5 2,280,750 + ECD_02203 0.16 -3.1 2,280,751 - ECD_02203 0.16 -1.7 2,281,017 - ECD_02203 0.30 -1.7 2,281,066 - ECD_02203 0.33 -1.9 2,281,105 - ECD_02203 0.35 -0.8 2,281,346 + ECD_02203 0.48 -0.8 2,281,366 - ECD_02203 0.49 -0.8 2,281,734 - ECD_02203 0.69 -0.9 2,281,827 - ECD_02203 0.74 -1.6 2,281,829 + ECD_02203 0.74 -0.5 2,281,881 - ECD_02203 0.77 -0.5 2,281,881 - ECD_02203 0.77 +0.5 2,281,980 + ECD_02203 0.83 -1.0 2,281,982 + ECD_02203 0.83 -1.3 2,281,982 + ECD_02203 0.83 -1.1 2,281,983 - ECD_02203 0.83 -0.7 2,281,983 - ECD_02203 0.83 -1.1 2,281,983 - ECD_02203 0.83 -1.4 2,281,995 - ECD_02203 0.83 -0.1 2,282,067 + ECD_02203 0.87 +0.6 2,282,121 - +0.3 2,282,121 - -0.3 2,282,414 - ECD_02204 0.39 -0.3 2,282,414 - ECD_02204 0.39 -1.9 2,282,713 + ECD_02205 0.21 -0.8 2,282,713 + ECD_02205 0.21 -1.4 2,282,713 + ECD_02205 0.21 -0.8 2,282,714 - ECD_02205 0.22 -0.9 2,282,714 - ECD_02205 0.22 -1.6 2,282,755 + ECD_02205 0.29 -0.3 2,282,759 - ECD_02205 0.30 -1.8 2,282,771 - ECD_02205 0.32 -1.7 2,283,004 - ECD_02205 0.74 -0.4 2,283,050 - ECD_02205 0.82 -2.7 2,283,110 + -0.7 2,283,131 - -1.0 2,283,258 + ECD_02206 0.18 -1.0 2,283,261 - ECD_02206 0.19 -1.0
Or see this region's nucleotide sequence