Strain Fitness in Escherichia coli BL21 around ECD_02151

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02150 and ECD_02151 are separated by 30 nucleotidesECD_02151 and ECD_02152 are separated by 73 nucleotidesECD_02152 and ECD_02153 are separated by 4 nucleotides ECD_02150: ECD_02150 - short chain fatty acid transporter, at 2,215,117 to 2,216,439 _02150 ECD_02151: ECD_02151 - acetyl-CoA acetyltransferase, at 2,216,470 to 2,217,654 _02151 ECD_02152: ECD_02152 - DUF2135 family protein, putative host defense protein, at 2,217,728 to 2,218,504 _02152 ECD_02153: ECD_02153 - tandem DUF2300 domain protein, putative host defense protein, at 2,218,509 to 2,220,158 _02153 Position (kb) 2216 2217 2218Strain fitness (log2 ratio) -2 -1 0 1at 2215.971 kb on - strand, within ECD_02150at 2215.975 kb on - strand, within ECD_02150at 2215.975 kb on - strand, within ECD_02150at 2215.991 kb on - strand, within ECD_02150at 2215.992 kb on + strand, within ECD_02150at 2216.053 kb on + strand, within ECD_02150at 2216.054 kb on - strand, within ECD_02150at 2216.175 kb on + strand, within ECD_02150at 2216.378 kb on - strandat 2216.503 kb on - strandat 2216.571 kb on + strandat 2216.572 kb on - strandat 2216.640 kb on - strand, within ECD_02151at 2216.729 kb on + strand, within ECD_02151at 2216.836 kb on + strand, within ECD_02151at 2217.011 kb on + strand, within ECD_02151at 2217.011 kb on + strand, within ECD_02151at 2217.012 kb on - strand, within ECD_02151at 2217.058 kb on - strand, within ECD_02151at 2217.557 kb on + strandat 2217.557 kb on + strandat 2217.653 kb on - strandat 2217.770 kb on - strandat 2217.784 kb on + strandat 2217.785 kb on - strandat 2217.785 kb on - strandat 2217.874 kb on - strand, within ECD_02152at 2217.877 kb on - strand, within ECD_02152at 2217.886 kb on - strand, within ECD_02152at 2217.886 kb on - strand, within ECD_02152at 2217.997 kb on - strand, within ECD_02152at 2218.357 kb on - strand, within ECD_02152at 2218.546 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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2,215,971 - ECD_02150 0.65 -0.0
2,215,975 - ECD_02150 0.65 -0.3
2,215,975 - ECD_02150 0.65 +0.4
2,215,991 - ECD_02150 0.66 -0.0
2,215,992 + ECD_02150 0.66 +0.6
2,216,053 + ECD_02150 0.71 -2.3
2,216,054 - ECD_02150 0.71 +0.1
2,216,175 + ECD_02150 0.80 +1.2
2,216,378 - -0.1
2,216,503 - +1.0
2,216,571 + -0.1
2,216,572 - -0.1
2,216,640 - ECD_02151 0.14 -0.3
2,216,729 + ECD_02151 0.22 +0.4
2,216,836 + ECD_02151 0.31 +0.6
2,217,011 + ECD_02151 0.46 +0.7
2,217,011 + ECD_02151 0.46 +0.5
2,217,012 - ECD_02151 0.46 -2.2
2,217,058 - ECD_02151 0.50 +0.7
2,217,557 + +0.9
2,217,557 + +1.0
2,217,653 - -0.6
2,217,770 - -0.1
2,217,784 + -0.4
2,217,785 - -0.1
2,217,785 - +0.0
2,217,874 - ECD_02152 0.19 +0.7
2,217,877 - ECD_02152 0.19 +0.0
2,217,886 - ECD_02152 0.20 +0.7
2,217,886 - ECD_02152 0.20 -0.6
2,217,997 - ECD_02152 0.35 -0.4
2,218,357 - ECD_02152 0.81 -1.2
2,218,546 + -0.1

Or see this region's nucleotide sequence