Strain Fitness in Escherichia coli BL21 around ECD_01691

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01690 and ECD_01691 are separated by 52 nucleotidesECD_01691 and ECD_01692 are separated by 286 nucleotides ECD_01690: ECD_01690 - uncharacterized protein, at 1,749,563 to 1,749,685 _01690 ECD_01691: ECD_01691 - acid-inducible putative outer membrane protein, at 1,749,738 to 1,750,496 _01691 ECD_01692: ECD_01692 - 6-phosphofructokinase II, at 1,750,783 to 1,751,712 _01692 Position (kb) 1749 1750 1751Strain fitness (log2 ratio) -2 -1 0 1at 1749.717 kb on - strandat 1749.740 kb on - strandat 1749.780 kb on - strandat 1749.868 kb on - strand, within ECD_01691at 1750.160 kb on - strand, within ECD_01691at 1750.308 kb on - strand, within ECD_01691at 1751.066 kb on + strand, within ECD_01692at 1751.319 kb on + strand, within ECD_01692at 1751.496 kb on + strand, within ECD_01692

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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1,749,717 - +1.1
1,749,740 - -0.8
1,749,780 - +1.2
1,749,868 - ECD_01691 0.17 -2.4
1,750,160 - ECD_01691 0.56 -1.5
1,750,308 - ECD_01691 0.75 -0.7
1,751,066 + ECD_01692 0.30 +0.6
1,751,319 + ECD_01692 0.58 +0.6
1,751,496 + ECD_01692 0.77 -0.1

Or see this region's nucleotide sequence