Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00705 and ECD_00706 are separated by 113 nucleotides ECD_00706 and ECD_00707 are separated by 315 nucleotides ECD_00707 and ECD_00708 are separated by 157 nucleotides
ECD_00705: ECD_00705 - zinc efflux system, at 742,290 to 743,231
_00705
ECD_00706: ECD_00706 - putative periplasmic protein, at 743,345 to 743,725
_00706
ECD_00707: ECD_00707 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible, at 744,041 to 745,093
_00707
ECD_00708: ECD_00708 - phosphoglyceromutase 1, at 745,251 to 746,003
_00708
Position (kb)
744
745
746 Strain fitness (log2 ratio)
-1
0
1
2 at 743.073 kb on - strand, within ECD_00705 at 743.186 kb on + strand at 743.260 kb on + strand at 743.261 kb on - strand at 743.346 kb on + strand at 743.537 kb on + strand, within ECD_00706 at 743.557 kb on + strand, within ECD_00706 at 743.699 kb on + strand at 743.739 kb on + strand at 743.749 kb on - strand at 743.790 kb on - strand at 743.791 kb on + strand at 743.792 kb on - strand at 743.999 kb on + strand at 743.999 kb on + strand at 744.254 kb on + strand, within ECD_00707 at 744.382 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.385 kb on + strand, within ECD_00707 at 744.494 kb on + strand, within ECD_00707 at 744.761 kb on + strand, within ECD_00707 at 744.998 kb on + strand at 745.039 kb on + strand at 745.053 kb on + strand at 745.194 kb on - strand at 745.253 kb on - strand at 745.319 kb on - strand at 745.383 kb on - strand, within ECD_00708 at 745.386 kb on - strand, within ECD_00708 at 745.499 kb on + strand, within ECD_00708 at 745.878 kb on - strand, within ECD_00708 at 745.878 kb on - strand, within ECD_00708 at 745.928 kb on - strand at 745.992 kb on - strand at 746.004 kb on - strand at 746.006 kb on - strand at 746.010 kb on - strand at 746.010 kb on - strand at 746.079 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 743,073 - ECD_00705 0.83 +2.0 743,186 + +0.5 743,260 + -0.4 743,261 - -0.2 743,346 + +0.6 743,537 + ECD_00706 0.50 -0.3 743,557 + ECD_00706 0.56 -0.1 743,699 + +0.7 743,739 + +0.1 743,749 - -0.1 743,790 - -0.7 743,791 + +0.7 743,792 - +0.2 743,999 + -0.3 743,999 + -0.1 744,254 + ECD_00707 0.20 +0.7 744,382 + ECD_00707 0.32 -0.7 744,385 + ECD_00707 0.33 -1.5 744,385 + ECD_00707 0.33 -0.8 744,385 + ECD_00707 0.33 +0.2 744,494 + ECD_00707 0.43 -1.6 744,761 + ECD_00707 0.68 -1.0 744,998 + +1.0 745,039 + +0.0 745,053 + +0.5 745,194 - -0.2 745,253 - +0.4 745,319 - +0.1 745,383 - ECD_00708 0.18 +0.3 745,386 - ECD_00708 0.18 -0.7 745,499 + ECD_00708 0.33 +0.0 745,878 - ECD_00708 0.83 +0.5 745,878 - ECD_00708 0.83 +0.7 745,928 - +0.3 745,992 - -0.1 746,004 - -1.2 746,006 - -0.6 746,010 - +1.0 746,010 - -0.4 746,079 - +0.4
Or see this region's nucleotide sequence