Strain Fitness in Escherichia coli BL21 around ECD_00707

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00705 and ECD_00706 are separated by 113 nucleotidesECD_00706 and ECD_00707 are separated by 315 nucleotidesECD_00707 and ECD_00708 are separated by 157 nucleotides ECD_00705: ECD_00705 - zinc efflux system, at 742,290 to 743,231 _00705 ECD_00706: ECD_00706 - putative periplasmic protein, at 743,345 to 743,725 _00706 ECD_00707: ECD_00707 - 3-deoxy-D-arabino-heptulosonate-7-phosphate synthase, phenylalanine repressible, at 744,041 to 745,093 _00707 ECD_00708: ECD_00708 - phosphoglyceromutase 1, at 745,251 to 746,003 _00708 Position (kb) 744 745 746Strain fitness (log2 ratio) -1 0 1 2at 743.073 kb on - strand, within ECD_00705at 743.186 kb on + strandat 743.260 kb on + strandat 743.261 kb on - strandat 743.346 kb on + strandat 743.537 kb on + strand, within ECD_00706at 743.557 kb on + strand, within ECD_00706at 743.699 kb on + strandat 743.739 kb on + strandat 743.749 kb on - strandat 743.790 kb on - strandat 743.791 kb on + strandat 743.792 kb on - strandat 743.999 kb on + strandat 743.999 kb on + strandat 744.254 kb on + strand, within ECD_00707at 744.382 kb on + strand, within ECD_00707at 744.385 kb on + strand, within ECD_00707at 744.385 kb on + strand, within ECD_00707at 744.385 kb on + strand, within ECD_00707at 744.494 kb on + strand, within ECD_00707at 744.761 kb on + strand, within ECD_00707at 744.998 kb on + strandat 745.039 kb on + strandat 745.053 kb on + strandat 745.194 kb on - strandat 745.253 kb on - strandat 745.319 kb on - strandat 745.383 kb on - strand, within ECD_00708at 745.386 kb on - strand, within ECD_00708at 745.499 kb on + strand, within ECD_00708at 745.878 kb on - strand, within ECD_00708at 745.878 kb on - strand, within ECD_00708at 745.928 kb on - strandat 745.992 kb on - strandat 746.004 kb on - strandat 746.006 kb on - strandat 746.010 kb on - strandat 746.010 kb on - strandat 746.079 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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743,073 - ECD_00705 0.83 +2.0
743,186 + +0.5
743,260 + -0.4
743,261 - -0.2
743,346 + +0.6
743,537 + ECD_00706 0.50 -0.3
743,557 + ECD_00706 0.56 -0.1
743,699 + +0.7
743,739 + +0.1
743,749 - -0.1
743,790 - -0.7
743,791 + +0.7
743,792 - +0.2
743,999 + -0.3
743,999 + -0.1
744,254 + ECD_00707 0.20 +0.7
744,382 + ECD_00707 0.32 -0.7
744,385 + ECD_00707 0.33 -1.5
744,385 + ECD_00707 0.33 -0.8
744,385 + ECD_00707 0.33 +0.2
744,494 + ECD_00707 0.43 -1.6
744,761 + ECD_00707 0.68 -1.0
744,998 + +1.0
745,039 + +0.0
745,053 + +0.5
745,194 - -0.2
745,253 - +0.4
745,319 - +0.1
745,383 - ECD_00708 0.18 +0.3
745,386 - ECD_00708 0.18 -0.7
745,499 + ECD_00708 0.33 +0.0
745,878 - ECD_00708 0.83 +0.5
745,878 - ECD_00708 0.83 +0.7
745,928 - +0.3
745,992 - -0.1
746,004 - -1.2
746,006 - -0.6
746,010 - +1.0
746,010 - -0.4
746,079 - +0.4

Or see this region's nucleotide sequence