Strain Fitness in Escherichia coli BL21 around ECD_00481

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00480 and ECD_00481 are separated by 219 nucleotidesECD_00481 and ECD_00482 are separated by 30 nucleotides ECD_00480: ECD_00480 - FimA-like protein, at 527,299 to 527,841 _00480 ECD_00481: ECD_00481 - putative periplasmic pilus chaperone, at 528,061 to 528,753 _00481 ECD_00482: ECD_00482 - putative outer membrane export usher protein, at 528,784 to 531,393 _00482 Position (kb) 528 529Strain fitness (log2 ratio) -1 0 1 2at 527.430 kb on + strand, within ECD_00480at 527.431 kb on - strand, within ECD_00480at 527.635 kb on - strand, within ECD_00480at 527.707 kb on - strand, within ECD_00480at 528.162 kb on + strand, within ECD_00481at 528.553 kb on - strand, within ECD_00481at 529.128 kb on + strand, within ECD_00482at 529.532 kb on + strand, within ECD_00482at 529.717 kb on + strand, within ECD_00482

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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527,430 + ECD_00480 0.24 +0.4
527,431 - ECD_00480 0.24 +1.9
527,635 - ECD_00480 0.62 -0.7
527,707 - ECD_00480 0.75 -0.2
528,162 + ECD_00481 0.15 -0.3
528,553 - ECD_00481 0.71 -0.7
529,128 + ECD_00482 0.13 +0.4
529,532 + ECD_00482 0.29 +0.3
529,717 + ECD_00482 0.36 +0.2

Or see this region's nucleotide sequence