Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00099 and ECD_00100 are separated by 59 nucleotides ECD_00100 and ECD_00101 are separated by 215 nucleotides ECD_00101 and ECD_00102 are separated by 9 nucleotides
ECD_00099: ECD_00099 - preprotein translocase subunit, ATPase, at 111,084 to 113,789
_00099
ECD_00100: ECD_00100 - dGTP-preferring nucleoside triphosphate pyrophosphohydrolase, at 113,849 to 114,238
_00100
ECD_00101: ECD_00101 - DNA gyrase inhibitor, at 114,454 to 114,651
_00101
ECD_00102: ECD_00102 - FtsZ stabilizer, at 114,661 to 115,404
_00102
Position (kb)
113
114
115 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 113.575 kb on + strand at 113.575 kb on + strand at 113.575 kb on + strand at 113.575 kb on + strand at 113.576 kb on - strand at 113.579 kb on + strand at 113.579 kb on + strand at 113.579 kb on + strand at 113.579 kb on + strand at 113.580 kb on - strand at 113.654 kb on + strand at 113.719 kb on + strand at 113.719 kb on + strand at 113.719 kb on + strand at 113.794 kb on + strand at 113.836 kb on + strand at 113.875 kb on + strand at 113.875 kb on + strand at 113.876 kb on - strand at 113.905 kb on + strand, within ECD_00100 at 114.087 kb on + strand, within ECD_00100 at 114.087 kb on + strand, within ECD_00100 at 114.087 kb on + strand, within ECD_00100 at 114.088 kb on - strand, within ECD_00100 at 114.178 kb on + strand, within ECD_00100 at 114.226 kb on + strand at 114.237 kb on - strand at 114.246 kb on - strand at 114.432 kb on + strand at 114.433 kb on - strand at 114.640 kb on - strand at 114.640 kb on - strand at 114.640 kb on - strand at 114.663 kb on - strand at 114.663 kb on - strand at 114.751 kb on - strand, within ECD_00102 at 114.751 kb on - strand, within ECD_00102 at 114.751 kb on - strand, within ECD_00102 at 114.751 kb on - strand, within ECD_00102 at 114.900 kb on + strand, within ECD_00102 at 114.900 kb on + strand, within ECD_00102 at 114.901 kb on - strand, within ECD_00102 at 114.901 kb on - strand, within ECD_00102 at 114.901 kb on - strand, within ECD_00102 at 114.901 kb on - strand, within ECD_00102 at 114.944 kb on - strand, within ECD_00102 at 114.998 kb on - strand, within ECD_00102 at 115.100 kb on - strand, within ECD_00102 at 115.102 kb on + strand, within ECD_00102 at 115.143 kb on + strand, within ECD_00102 at 115.189 kb on - strand, within ECD_00102
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 113,575 + -0.1 113,575 + -0.4 113,575 + +0.1 113,575 + +0.1 113,576 - +0.2 113,579 + +0.8 113,579 + +1.4 113,579 + +0.7 113,579 + +0.4 113,580 - +0.1 113,654 + +0.0 113,719 + -0.7 113,719 + -0.7 113,719 + +1.2 113,794 + +0.2 113,836 + +0.6 113,875 + +0.4 113,875 + +0.0 113,876 - -0.3 113,905 + ECD_00100 0.14 -0.9 114,087 + ECD_00100 0.61 -0.6 114,087 + ECD_00100 0.61 -0.4 114,087 + ECD_00100 0.61 -0.2 114,088 - ECD_00100 0.61 -1.1 114,178 + ECD_00100 0.84 -0.7 114,226 + +0.7 114,237 - +0.5 114,246 - +0.4 114,432 + -0.4 114,433 - -0.7 114,640 - -0.5 114,640 - -0.3 114,640 - +0.0 114,663 - -0.2 114,663 - -0.5 114,751 - ECD_00102 0.12 -0.3 114,751 - ECD_00102 0.12 -0.2 114,751 - ECD_00102 0.12 +0.8 114,751 - ECD_00102 0.12 -0.5 114,900 + ECD_00102 0.32 +0.2 114,900 + ECD_00102 0.32 -0.9 114,901 - ECD_00102 0.32 -0.2 114,901 - ECD_00102 0.32 +0.3 114,901 - ECD_00102 0.32 -0.4 114,901 - ECD_00102 0.32 +0.3 114,944 - ECD_00102 0.38 +0.4 114,998 - ECD_00102 0.45 -1.8 115,100 - ECD_00102 0.59 +0.1 115,102 + ECD_00102 0.59 +0.5 115,143 + ECD_00102 0.65 -2.1 115,189 - ECD_00102 0.71 -2.8
Or see this region's nucleotide sequence