Strain Fitness in Escherichia coli BL21 around ECD_00098

Experiment: Bas27

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00097 and ECD_00098 are separated by 230 nucleotidesECD_00098 and ECD_00099 are separated by 61 nucleotides ECD_00097: ECD_00097 - UDP-3-O-acyl N-acetylglucosamine deacetylase, at 109,362 to 110,279 _00097 ECD_00098: ECD_00098 - regulator of secA translation, at 110,510 to 111,022 _00098 ECD_00099: ECD_00099 - preprotein translocase subunit, ATPase, at 111,084 to 113,789 _00099 Position (kb) 110 111 112Strain fitness (log2 ratio) -1 0 1at 110.269 kb on + strandat 110.287 kb on + strandat 110.287 kb on + strandat 110.287 kb on + strandat 110.287 kb on + strandat 110.287 kb on + strandat 110.288 kb on - strandat 110.288 kb on - strandat 110.288 kb on - strandat 110.288 kb on - strandat 110.367 kb on + strandat 110.425 kb on - strandat 110.595 kb on + strand, within ECD_00098at 111.020 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas27
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110,269 + +0.2
110,287 + -0.2
110,287 + -1.0
110,287 + -0.0
110,287 + +0.4
110,287 + +0.6
110,288 - +0.2
110,288 - +0.4
110,288 - +1.1
110,288 - -0.1
110,367 + +0.9
110,425 - -0.3
110,595 + ECD_00098 0.17 -0.9
111,020 + +0.5

Or see this region's nucleotide sequence