Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02632 and ECD_02633 are separated by 20 nucleotides ECD_02633 and ECD_02634 are separated by 1 nucleotides
ECD_02632: ECD_02632 - D-glucarate dehydratase 1, at 2,750,635 to 2,751,975
_02632
ECD_02633: ECD_02633 - glucarate dehydratase-related protein, substrate unknown, at 2,751,996 to 2,753,336
_02633
ECD_02634: ECD_02634 - putative D-glucarate transporter, at 2,753,338 to 2,754,690
_02634
Position (kb)
2751
2752
2753
2754 Strain fitness (log2 ratio)
-1
0
1
2 at 2751.007 kb on + strand, within ECD_02632 at 2751.075 kb on + strand, within ECD_02632 at 2751.109 kb on - strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.203 kb on + strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.204 kb on - strand, within ECD_02632 at 2751.224 kb on + strand, within ECD_02632 at 2751.267 kb on + strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.280 kb on - strand, within ECD_02632 at 2751.283 kb on - strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.318 kb on + strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.319 kb on - strand, within ECD_02632 at 2751.527 kb on + strand, within ECD_02632 at 2751.528 kb on - strand, within ECD_02632 at 2751.528 kb on - strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.640 kb on + strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.641 kb on - strand, within ECD_02632 at 2751.655 kb on - strand, within ECD_02632 at 2751.655 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.659 kb on - strand, within ECD_02632 at 2751.708 kb on + strand, within ECD_02632 at 2751.737 kb on + strand, within ECD_02632 at 2751.738 kb on - strand, within ECD_02632 at 2751.760 kb on + strand, within ECD_02632 at 2751.861 kb on + strand at 2751.906 kb on + strand at 2751.907 kb on - strand at 2751.907 kb on - strand at 2751.907 kb on - strand at 2751.946 kb on - strand at 2751.961 kb on - strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.975 kb on + strand at 2751.976 kb on - strand at 2751.976 kb on - strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.979 kb on + strand at 2751.980 kb on - strand at 2751.980 kb on - strand at 2751.980 kb on - strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.051 kb on + strand at 2752.052 kb on - strand at 2752.052 kb on - strand at 2752.098 kb on - strand at 2752.098 kb on - strand at 2752.100 kb on - strand at 2752.100 kb on - strand at 2752.120 kb on - strand at 2752.120 kb on - strand at 2752.184 kb on + strand, within ECD_02633 at 2752.253 kb on + strand, within ECD_02633 at 2752.316 kb on + strand, within ECD_02633 at 2752.317 kb on - strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.319 kb on + strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.320 kb on - strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.415 kb on + strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.416 kb on - strand, within ECD_02633 at 2752.476 kb on - strand, within ECD_02633 at 2752.567 kb on + strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.568 kb on - strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.571 kb on + strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.572 kb on - strand, within ECD_02633 at 2752.643 kb on + strand, within ECD_02633 at 2752.644 kb on - strand, within ECD_02633 at 2752.721 kb on + strand, within ECD_02633 at 2752.745 kb on - strand, within ECD_02633 at 2752.838 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.849 kb on + strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.850 kb on - strand, within ECD_02633 at 2752.880 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.882 kb on + strand, within ECD_02633 at 2752.883 kb on - strand, within ECD_02633 at 2752.891 kb on + strand, within ECD_02633 at 2752.892 kb on - strand, within ECD_02633 at 2752.905 kb on - strand, within ECD_02633 at 2752.905 kb on - strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.907 kb on + strand, within ECD_02633 at 2752.908 kb on - strand, within ECD_02633 at 2752.908 kb on - strand, within ECD_02633 at 2752.933 kb on - strand, within ECD_02633 at 2752.964 kb on + strand, within ECD_02633 at 2752.965 kb on - strand, within ECD_02633 at 2752.968 kb on + strand, within ECD_02633 at 2752.969 kb on - strand, within ECD_02633 at 2752.969 kb on - strand, within ECD_02633 at 2753.017 kb on - strand, within ECD_02633 at 2753.070 kb on - strand, within ECD_02633 at 2753.075 kb on + strand, within ECD_02633 at 2753.096 kb on + strand, within ECD_02633 at 2753.136 kb on - strand, within ECD_02633 at 2753.136 kb on - strand, within ECD_02633 at 2753.215 kb on - strand at 2753.222 kb on + strand at 2753.223 kb on - strand at 2753.236 kb on + strand at 2753.237 kb on - strand at 2753.243 kb on + strand at 2753.243 kb on + strand at 2753.243 kb on + strand at 2753.244 kb on - strand at 2753.259 kb on - strand at 2753.259 kb on - strand at 2753.304 kb on - strand at 2753.310 kb on - strand at 2753.312 kb on + strand at 2753.313 kb on - strand at 2753.313 kb on - strand at 2753.340 kb on - strand at 2753.396 kb on + strand at 2753.432 kb on + strand at 2753.433 kb on - strand at 2753.433 kb on - strand at 2753.433 kb on - strand at 2753.473 kb on - strand at 2753.473 kb on - strand at 2753.473 kb on - strand at 2753.473 kb on - strand at 2753.474 kb on + strand, within ECD_02634 at 2753.474 kb on + strand, within ECD_02634 at 2753.475 kb on - strand, within ECD_02634 at 2753.475 kb on - strand, within ECD_02634 at 2753.657 kb on + strand, within ECD_02634 at 2753.657 kb on + strand, within ECD_02634 at 2753.657 kb on + strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.658 kb on - strand, within ECD_02634 at 2753.698 kb on + strand, within ECD_02634 at 2753.698 kb on + strand, within ECD_02634 at 2753.712 kb on + strand, within ECD_02634 at 2753.713 kb on - strand, within ECD_02634 at 2753.761 kb on - strand, within ECD_02634 at 2753.858 kb on + strand, within ECD_02634 at 2753.858 kb on + strand, within ECD_02634 at 2753.859 kb on - strand, within ECD_02634 at 2753.859 kb on - strand, within ECD_02634 at 2753.874 kb on + strand, within ECD_02634 at 2753.875 kb on - strand, within ECD_02634 at 2753.875 kb on - strand, within ECD_02634 at 2753.878 kb on - strand, within ECD_02634 at 2753.885 kb on + strand, within ECD_02634 at 2753.885 kb on + strand, within ECD_02634 at 2753.885 kb on + strand, within ECD_02634 at 2753.885 kb on + strand, within ECD_02634 at 2753.901 kb on + strand, within ECD_02634 at 2753.902 kb on - strand, within ECD_02634 at 2753.902 kb on - strand, within ECD_02634 at 2753.918 kb on + strand, within ECD_02634 at 2753.918 kb on + strand, within ECD_02634 at 2753.919 kb on - strand, within ECD_02634 at 2753.919 kb on - strand, within ECD_02634 at 2753.945 kb on - strand, within ECD_02634 at 2753.994 kb on + strand, within ECD_02634 at 2754.013 kb on - strand, within ECD_02634 at 2754.041 kb on + strand, within ECD_02634 at 2754.042 kb on - strand, within ECD_02634 at 2754.042 kb on - strand, within ECD_02634 at 2754.106 kb on - strand, within ECD_02634 at 2754.336 kb on + strand, within ECD_02634
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 2,751,007 + ECD_02632 0.28 +0.3 2,751,075 + ECD_02632 0.33 -0.6 2,751,109 - ECD_02632 0.35 +0.2 2,751,203 + ECD_02632 0.42 -0.1 2,751,203 + ECD_02632 0.42 -1.0 2,751,203 + ECD_02632 0.42 -0.1 2,751,204 - ECD_02632 0.42 -0.8 2,751,204 - ECD_02632 0.42 -1.0 2,751,204 - ECD_02632 0.42 -0.2 2,751,224 + ECD_02632 0.44 +0.7 2,751,267 + ECD_02632 0.47 +0.2 2,751,280 - ECD_02632 0.48 -0.9 2,751,280 - ECD_02632 0.48 -0.4 2,751,280 - ECD_02632 0.48 -0.5 2,751,283 - ECD_02632 0.48 +0.4 2,751,318 + ECD_02632 0.51 -0.1 2,751,318 + ECD_02632 0.51 -0.0 2,751,318 + ECD_02632 0.51 +2.6 2,751,319 - ECD_02632 0.51 +1.4 2,751,319 - ECD_02632 0.51 +0.2 2,751,319 - ECD_02632 0.51 -0.4 2,751,527 + ECD_02632 0.67 -0.5 2,751,528 - ECD_02632 0.67 +0.5 2,751,528 - ECD_02632 0.67 -0.4 2,751,640 + ECD_02632 0.75 +0.4 2,751,640 + ECD_02632 0.75 -0.2 2,751,640 + ECD_02632 0.75 +0.5 2,751,641 - ECD_02632 0.75 +0.1 2,751,641 - ECD_02632 0.75 +1.0 2,751,641 - ECD_02632 0.75 +0.1 2,751,641 - ECD_02632 0.75 -0.5 2,751,641 - ECD_02632 0.75 -0.5 2,751,641 - ECD_02632 0.75 +0.2 2,751,641 - ECD_02632 0.75 -0.3 2,751,641 - ECD_02632 0.75 -0.6 2,751,641 - ECD_02632 0.75 -0.5 2,751,641 - ECD_02632 0.75 -0.1 2,751,641 - ECD_02632 0.75 +0.3 2,751,655 - ECD_02632 0.76 -0.2 2,751,655 - ECD_02632 0.76 +0.5 2,751,659 - ECD_02632 0.76 +0.1 2,751,659 - ECD_02632 0.76 -0.9 2,751,659 - ECD_02632 0.76 +0.1 2,751,659 - ECD_02632 0.76 -0.3 2,751,659 - ECD_02632 0.76 +0.3 2,751,708 + ECD_02632 0.80 -0.8 2,751,737 + ECD_02632 0.82 -0.3 2,751,738 - ECD_02632 0.82 -0.4 2,751,760 + ECD_02632 0.84 +0.7 2,751,861 + +1.1 2,751,906 + -1.7 2,751,907 - +0.6 2,751,907 - +0.9 2,751,907 - +0.5 2,751,946 - +0.2 2,751,961 - -1.7 2,751,975 + +0.9 2,751,975 + -0.1 2,751,975 + +0.6 2,751,975 + -0.2 2,751,976 - -0.4 2,751,976 - -0.4 2,751,979 + -0.6 2,751,979 + +0.2 2,751,979 + +0.3 2,751,979 + +0.8 2,751,979 + -0.2 2,751,979 + +0.6 2,751,979 + -0.4 2,751,979 + -0.0 2,751,979 + -1.3 2,751,979 + -0.3 2,751,980 - +0.6 2,751,980 - +1.4 2,751,980 - +0.0 2,752,051 + +1.1 2,752,051 + +0.6 2,752,051 + +0.5 2,752,051 + +0.7 2,752,051 + +0.5 2,752,052 - +0.4 2,752,052 - +0.5 2,752,098 - -0.1 2,752,098 - -0.0 2,752,100 - +0.5 2,752,100 - +0.5 2,752,120 - -0.2 2,752,120 - -0.3 2,752,184 + ECD_02633 0.14 -0.5 2,752,253 + ECD_02633 0.19 -0.6 2,752,316 + ECD_02633 0.24 -0.2 2,752,317 - ECD_02633 0.24 +0.8 2,752,319 + ECD_02633 0.24 -1.1 2,752,319 + ECD_02633 0.24 -1.3 2,752,319 + ECD_02633 0.24 +0.5 2,752,320 - ECD_02633 0.24 +0.7 2,752,320 - ECD_02633 0.24 +0.5 2,752,320 - ECD_02633 0.24 -0.4 2,752,320 - ECD_02633 0.24 +0.1 2,752,320 - ECD_02633 0.24 -0.6 2,752,415 + ECD_02633 0.31 -0.1 2,752,415 + ECD_02633 0.31 +0.8 2,752,415 + ECD_02633 0.31 +0.1 2,752,416 - ECD_02633 0.31 +0.7 2,752,416 - ECD_02633 0.31 +1.0 2,752,416 - ECD_02633 0.31 -0.5 2,752,476 - ECD_02633 0.36 +0.3 2,752,567 + ECD_02633 0.43 +1.3 2,752,568 - ECD_02633 0.43 -1.1 2,752,568 - ECD_02633 0.43 +0.3 2,752,568 - ECD_02633 0.43 -0.1 2,752,568 - ECD_02633 0.43 +0.7 2,752,571 + ECD_02633 0.43 -0.0 2,752,571 + ECD_02633 0.43 -0.1 2,752,571 + ECD_02633 0.43 +0.5 2,752,571 + ECD_02633 0.43 -0.9 2,752,571 + ECD_02633 0.43 -0.0 2,752,572 - ECD_02633 0.43 -0.3 2,752,572 - ECD_02633 0.43 +0.5 2,752,572 - ECD_02633 0.43 +0.6 2,752,572 - ECD_02633 0.43 +0.6 2,752,572 - ECD_02633 0.43 +0.6 2,752,572 - ECD_02633 0.43 -0.8 2,752,572 - ECD_02633 0.43 -0.1 2,752,572 - ECD_02633 0.43 -0.2 2,752,572 - ECD_02633 0.43 -1.0 2,752,643 + ECD_02633 0.48 +0.2 2,752,644 - ECD_02633 0.48 +0.9 2,752,721 + ECD_02633 0.54 -1.7 2,752,745 - ECD_02633 0.56 -0.2 2,752,838 + ECD_02633 0.63 -0.2 2,752,849 + ECD_02633 0.64 -0.2 2,752,849 + ECD_02633 0.64 +1.2 2,752,849 + ECD_02633 0.64 +1.1 2,752,849 + ECD_02633 0.64 -1.7 2,752,849 + ECD_02633 0.64 -1.0 2,752,850 - ECD_02633 0.64 -0.6 2,752,850 - ECD_02633 0.64 -0.1 2,752,850 - ECD_02633 0.64 +0.5 2,752,850 - ECD_02633 0.64 -1.2 2,752,880 + ECD_02633 0.66 +1.0 2,752,882 + ECD_02633 0.66 +0.1 2,752,882 + ECD_02633 0.66 +0.3 2,752,882 + ECD_02633 0.66 -1.1 2,752,882 + ECD_02633 0.66 +0.3 2,752,883 - ECD_02633 0.66 +0.3 2,752,891 + ECD_02633 0.67 +0.8 2,752,892 - ECD_02633 0.67 +0.2 2,752,905 - ECD_02633 0.68 +0.5 2,752,905 - ECD_02633 0.68 +1.0 2,752,907 + ECD_02633 0.68 -0.3 2,752,907 + ECD_02633 0.68 -0.7 2,752,907 + ECD_02633 0.68 +1.1 2,752,908 - ECD_02633 0.68 +0.3 2,752,908 - ECD_02633 0.68 +1.0 2,752,933 - ECD_02633 0.70 -0.1 2,752,964 + ECD_02633 0.72 -0.0 2,752,965 - ECD_02633 0.72 +0.2 2,752,968 + ECD_02633 0.72 +0.1 2,752,969 - ECD_02633 0.73 +0.8 2,752,969 - ECD_02633 0.73 -1.0 2,753,017 - ECD_02633 0.76 +1.3 2,753,070 - ECD_02633 0.80 +0.3 2,753,075 + ECD_02633 0.80 +0.4 2,753,096 + ECD_02633 0.82 -0.8 2,753,136 - ECD_02633 0.85 +0.4 2,753,136 - ECD_02633 0.85 +0.4 2,753,215 - +1.3 2,753,222 + +1.0 2,753,223 - +0.0 2,753,236 + -0.7 2,753,237 - +0.1 2,753,243 + +0.3 2,753,243 + +0.5 2,753,243 + -0.4 2,753,244 - -0.4 2,753,259 - +0.1 2,753,259 - +0.8 2,753,304 - +0.4 2,753,310 - +0.2 2,753,312 + -1.2 2,753,313 - +0.1 2,753,313 - +0.8 2,753,340 - -1.3 2,753,396 + -0.2 2,753,432 + +0.2 2,753,433 - -0.8 2,753,433 - -0.8 2,753,433 - +0.1 2,753,473 - +0.8 2,753,473 - +0.1 2,753,473 - +0.2 2,753,473 - +0.5 2,753,474 + ECD_02634 0.10 +0.5 2,753,474 + ECD_02634 0.10 +0.0 2,753,475 - ECD_02634 0.10 -0.5 2,753,475 - ECD_02634 0.10 -0.0 2,753,657 + ECD_02634 0.24 -0.6 2,753,657 + ECD_02634 0.24 -0.2 2,753,657 + ECD_02634 0.24 -0.6 2,753,658 - ECD_02634 0.24 -0.7 2,753,658 - ECD_02634 0.24 +0.2 2,753,658 - ECD_02634 0.24 -1.2 2,753,658 - ECD_02634 0.24 -0.3 2,753,658 - ECD_02634 0.24 -0.4 2,753,658 - ECD_02634 0.24 +0.9 2,753,658 - ECD_02634 0.24 +0.0 2,753,658 - ECD_02634 0.24 +0.4 2,753,658 - ECD_02634 0.24 +0.2 2,753,698 + ECD_02634 0.27 -0.2 2,753,698 + ECD_02634 0.27 -0.4 2,753,712 + ECD_02634 0.28 +0.5 2,753,713 - ECD_02634 0.28 -0.2 2,753,761 - ECD_02634 0.31 -0.4 2,753,858 + ECD_02634 0.38 +0.6 2,753,858 + ECD_02634 0.38 +0.3 2,753,859 - ECD_02634 0.39 +0.2 2,753,859 - ECD_02634 0.39 -0.4 2,753,874 + ECD_02634 0.40 -0.4 2,753,875 - ECD_02634 0.40 +0.5 2,753,875 - ECD_02634 0.40 -0.5 2,753,878 - ECD_02634 0.40 -0.1 2,753,885 + ECD_02634 0.40 +0.5 2,753,885 + ECD_02634 0.40 +0.1 2,753,885 + ECD_02634 0.40 -0.1 2,753,885 + ECD_02634 0.40 -1.1 2,753,901 + ECD_02634 0.42 -0.1 2,753,902 - ECD_02634 0.42 -0.9 2,753,902 - ECD_02634 0.42 +0.1 2,753,918 + ECD_02634 0.43 +0.5 2,753,918 + ECD_02634 0.43 -0.0 2,753,919 - ECD_02634 0.43 +1.0 2,753,919 - ECD_02634 0.43 +1.0 2,753,945 - ECD_02634 0.45 -0.3 2,753,994 + ECD_02634 0.48 -0.3 2,754,013 - ECD_02634 0.50 +0.1 2,754,041 + ECD_02634 0.52 -0.6 2,754,042 - ECD_02634 0.52 -0.3 2,754,042 - ECD_02634 0.52 -1.5 2,754,106 - ECD_02634 0.57 -0.2 2,754,336 + ECD_02634 0.74 +0.9
Or see this region's nucleotide sequence