Experiment: Bas27
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01365 and ECD_01366 are separated by 13 nucleotides ECD_01366 and ECD_01367 are separated by 50 nucleotides ECD_01367 and ECD_01368 are separated by 200 nucleotides
ECD_01365: ECD_01365 - putative esterase, at 1,432,425 to 1,434,182
_01365
ECD_01366: ECD_01366 - putative phosphatase inner membrane protein, at 1,434,196 to 1,435,488
_01366
ECD_01367: ECD_01367 - NADH-azoreductase, FMN-dependent, at 1,435,539 to 1,436,144
_01367
ECD_01368: ECD_01368 - putative ATP-dependent helicase, at 1,436,345 to 1,440,247
_01368
Position (kb) 1434
1435
1436 Strain fitness (log2 ratio) -1
0
1 at 1433.689 kb on + strand, within ECD_01365 at 1434.035 kb on + strand at 1434.576 kb on + strand, within ECD_01366 at 1434.600 kb on + strand, within ECD_01366 at 1434.754 kb on - strand, within ECD_01366 at 1434.866 kb on + strand, within ECD_01366 at 1434.866 kb on + strand, within ECD_01366 at 1434.941 kb on + strand, within ECD_01366 at 1435.486 kb on + strand at 1435.486 kb on + strand at 1435.512 kb on + strand at 1435.678 kb on + strand, within ECD_01367 at 1435.855 kb on + strand, within ECD_01367
Per-strain Table
Position Strand Gene LocusTag Fraction Bas27 remove 1,433,689 + ECD_01365 0.72 +1.0 1,434,035 + -0.0 1,434,576 + ECD_01366 0.29 +0.6 1,434,600 + ECD_01366 0.31 +0.1 1,434,754 - ECD_01366 0.43 -0.1 1,434,866 + ECD_01366 0.52 +0.9 1,434,866 + ECD_01366 0.52 -0.3 1,434,941 + ECD_01366 0.58 +0.9 1,435,486 + -0.2 1,435,486 + +0.7 1,435,512 + +0.8 1,435,678 + ECD_01367 0.23 +0.6 1,435,855 + ECD_01367 0.52 -0.1
Or see this region's nucleotide sequence