Strain Fitness in Bosea sp. OAE506 around ABIE41_RS15190

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS15185 and ABIE41_RS15190 are separated by 164 nucleotidesABIE41_RS15190 and ABIE41_RS15195 are separated by 237 nucleotides ABIE41_RS15185: ABIE41_RS15185 - IMP dehydrogenase, at 3,106,579 to 3,108,072 _RS15185 ABIE41_RS15190: ABIE41_RS15190 - hypothetical protein, at 3,108,237 to 3,108,581 _RS15190 ABIE41_RS15195: ABIE41_RS15195 - MFS transporter, at 3,108,819 to 3,110,270 _RS15195 Position (kb) 3108 3109Strain fitness (log2 ratio) -2 -1 0 1at 3107.589 kb on + strand, within ABIE41_RS15185at 3107.589 kb on + strand, within ABIE41_RS15185at 3108.175 kb on - strandat 3108.239 kb on - strandat 3108.239 kb on - strandat 3108.786 kb on - strandat 3108.966 kb on + strand, within ABIE41_RS15195at 3108.966 kb on + strand, within ABIE41_RS15195at 3108.967 kb on - strand, within ABIE41_RS15195at 3108.967 kb on - strand, within ABIE41_RS15195at 3109.218 kb on + strand, within ABIE41_RS15195at 3109.218 kb on + strand, within ABIE41_RS15195at 3109.219 kb on - strand, within ABIE41_RS15195at 3109.219 kb on - strand, within ABIE41_RS15195at 3109.219 kb on - strand, within ABIE41_RS15195at 3109.285 kb on - strand, within ABIE41_RS15195at 3109.285 kb on - strand, within ABIE41_RS15195at 3109.285 kb on - strand, within ABIE41_RS15195at 3109.285 kb on - strand, within ABIE41_RS15195at 3109.285 kb on - strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.491 kb on + strand, within ABIE41_RS15195at 3109.492 kb on - strand, within ABIE41_RS15195at 3109.492 kb on - strand, within ABIE41_RS15195

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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3,107,589 + ABIE41_RS15185 0.68 -2.3
3,107,589 + ABIE41_RS15185 0.68 -0.3
3,108,175 - -0.4
3,108,239 - -1.4
3,108,239 - -1.6
3,108,786 - -2.1
3,108,966 + ABIE41_RS15195 0.10 -0.1
3,108,966 + ABIE41_RS15195 0.10 +0.2
3,108,967 - ABIE41_RS15195 0.10 -0.1
3,108,967 - ABIE41_RS15195 0.10 +0.1
3,109,218 + ABIE41_RS15195 0.27 +0.2
3,109,218 + ABIE41_RS15195 0.27 -2.2
3,109,219 - ABIE41_RS15195 0.28 +0.3
3,109,219 - ABIE41_RS15195 0.28 -0.5
3,109,219 - ABIE41_RS15195 0.28 -0.0
3,109,285 - ABIE41_RS15195 0.32 +0.3
3,109,285 - ABIE41_RS15195 0.32 -0.5
3,109,285 - ABIE41_RS15195 0.32 +0.0
3,109,285 - ABIE41_RS15195 0.32 -0.8
3,109,285 - ABIE41_RS15195 0.32 +0.1
3,109,491 + ABIE41_RS15195 0.46 +0.1
3,109,491 + ABIE41_RS15195 0.46 -1.7
3,109,491 + ABIE41_RS15195 0.46 +0.0
3,109,491 + ABIE41_RS15195 0.46 +0.3
3,109,491 + ABIE41_RS15195 0.46 +0.1
3,109,491 + ABIE41_RS15195 0.46 -0.4
3,109,492 - ABIE41_RS15195 0.46 -0.5
3,109,492 - ABIE41_RS15195 0.46 +0.1

Or see this region's nucleotide sequence