Strain Fitness in Escherichia coli BL21 around ECD_03571

Experiment: Bas63

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03569 and ECD_03570 are separated by 111 nucleotidesECD_03570 and ECD_03571 are separated by 305 nucleotidesECD_03571 and ECD_03572 are separated by 1 nucleotides ECD_03569: ECD_03569 - heat shock chaperone, at 3,755,265 to 3,755,693 _03569 ECD_03570: ECD_03570 - heat shock chaperone, at 3,755,805 to 3,756,218 _03570 ECD_03571: ECD_03571 - DUF1375 family outer membrane protein, at 3,756,524 to 3,756,856 _03571 ECD_03572: ECD_03572 - DUF3748 family protein, at 3,756,858 to 3,758,072 _03572 Position (kb) 3756 3757Strain fitness (log2 ratio) -1 0 1 2 3at 3755.590 kb on + strand, within ECD_03569at 3755.590 kb on + strand, within ECD_03569at 3755.591 kb on - strand, within ECD_03569at 3755.687 kb on + strandat 3755.687 kb on + strandat 3755.687 kb on + strandat 3755.709 kb on + strandat 3755.710 kb on - strandat 3755.710 kb on - strandat 3755.710 kb on - strandat 3755.710 kb on - strandat 3755.721 kb on - strandat 3755.721 kb on - strandat 3755.749 kb on - strandat 3755.799 kb on - strandat 3755.806 kb on + strandat 3755.866 kb on + strand, within ECD_03570at 3755.866 kb on + strand, within ECD_03570at 3755.866 kb on + strand, within ECD_03570at 3755.867 kb on - strand, within ECD_03570at 3755.880 kb on + strand, within ECD_03570at 3755.881 kb on - strand, within ECD_03570at 3755.888 kb on + strand, within ECD_03570at 3755.965 kb on + strand, within ECD_03570at 3755.965 kb on + strand, within ECD_03570at 3755.965 kb on + strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3755.966 kb on - strand, within ECD_03570at 3756.018 kb on - strand, within ECD_03570at 3756.068 kb on + strand, within ECD_03570at 3756.068 kb on + strand, within ECD_03570at 3756.107 kb on + strand, within ECD_03570at 3756.110 kb on - strand, within ECD_03570at 3756.129 kb on - strand, within ECD_03570at 3756.190 kb on + strandat 3756.202 kb on - strandat 3756.202 kb on - strandat 3756.212 kb on + strandat 3756.213 kb on - strandat 3756.219 kb on - strandat 3756.225 kb on + strandat 3756.226 kb on - strandat 3756.249 kb on + strandat 3756.249 kb on + strandat 3756.250 kb on - strandat 3756.250 kb on - strandat 3756.250 kb on - strandat 3756.250 kb on - strandat 3756.313 kb on - strandat 3756.320 kb on - strandat 3756.354 kb on - strandat 3756.378 kb on + strandat 3756.378 kb on + strandat 3756.385 kb on + strandat 3756.385 kb on + strandat 3756.385 kb on + strandat 3756.386 kb on - strandat 3756.392 kb on + strandat 3756.447 kb on + strandat 3756.448 kb on - strandat 3756.448 kb on - strandat 3756.460 kb on - strandat 3756.460 kb on - strandat 3756.479 kb on + strandat 3756.480 kb on - strandat 3756.480 kb on - strandat 3756.482 kb on - strandat 3756.521 kb on - strandat 3756.524 kb on - strandat 3756.528 kb on + strandat 3756.528 kb on + strandat 3756.543 kb on + strandat 3756.544 kb on - strandat 3756.555 kb on + strandat 3756.555 kb on + strandat 3756.555 kb on + strandat 3756.556 kb on - strandat 3756.686 kb on - strand, within ECD_03571at 3756.827 kb on - strandat 3756.850 kb on + strandat 3756.851 kb on - strandat 3756.976 kb on + strandat 3756.977 kb on - strandat 3756.977 kb on - strandat 3757.128 kb on - strand, within ECD_03572at 3757.151 kb on + strand, within ECD_03572at 3757.225 kb on - strand, within ECD_03572at 3757.360 kb on - strand, within ECD_03572at 3757.360 kb on - strand, within ECD_03572at 3757.456 kb on + strand, within ECD_03572at 3757.456 kb on + strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.457 kb on - strand, within ECD_03572at 3757.506 kb on - strand, within ECD_03572at 3757.537 kb on + strand, within ECD_03572at 3757.538 kb on - strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.560 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.632 kb on + strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.633 kb on - strand, within ECD_03572at 3757.643 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.645 kb on + strand, within ECD_03572at 3757.646 kb on - strand, within ECD_03572at 3757.646 kb on - strand, within ECD_03572at 3757.649 kb on + strand, within ECD_03572at 3757.650 kb on - strand, within ECD_03572at 3757.719 kb on - strand, within ECD_03572at 3757.846 kb on + strand, within ECD_03572at 3757.846 kb on + strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572at 3757.847 kb on - strand, within ECD_03572

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas63
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3,755,590 + ECD_03569 0.76 -0.1
3,755,590 + ECD_03569 0.76 -0.8
3,755,591 - ECD_03569 0.76 -0.8
3,755,687 + +0.4
3,755,687 + -0.7
3,755,687 + +1.1
3,755,709 + +0.3
3,755,710 - +0.1
3,755,710 - +0.4
3,755,710 - +1.1
3,755,710 - +0.5
3,755,721 - -0.7
3,755,721 - +0.5
3,755,749 - +0.4
3,755,799 - +0.5
3,755,806 + +0.7
3,755,866 + ECD_03570 0.15 +0.1
3,755,866 + ECD_03570 0.15 +0.7
3,755,866 + ECD_03570 0.15 +1.0
3,755,867 - ECD_03570 0.15 +1.2
3,755,880 + ECD_03570 0.18 +0.2
3,755,881 - ECD_03570 0.18 +0.5
3,755,888 + ECD_03570 0.20 -0.9
3,755,965 + ECD_03570 0.39 -0.4
3,755,965 + ECD_03570 0.39 -0.7
3,755,965 + ECD_03570 0.39 +0.1
3,755,966 - ECD_03570 0.39 -0.5
3,755,966 - ECD_03570 0.39 +0.0
3,755,966 - ECD_03570 0.39 -0.6
3,755,966 - ECD_03570 0.39 -0.7
3,755,966 - ECD_03570 0.39 +0.5
3,755,966 - ECD_03570 0.39 -0.2
3,756,018 - ECD_03570 0.51 +0.7
3,756,068 + ECD_03570 0.64 +0.1
3,756,068 + ECD_03570 0.64 +0.7
3,756,107 + ECD_03570 0.73 +0.8
3,756,110 - ECD_03570 0.74 +0.2
3,756,129 - ECD_03570 0.78 +0.3
3,756,190 + +0.9
3,756,202 - +0.1
3,756,202 - -1.1
3,756,212 + +0.1
3,756,213 - -0.2
3,756,219 - +1.3
3,756,225 + -0.8
3,756,226 - -0.1
3,756,249 + -0.3
3,756,249 + -0.0
3,756,250 - +0.3
3,756,250 - +0.2
3,756,250 - +0.7
3,756,250 - -0.3
3,756,313 - -0.8
3,756,320 - -0.8
3,756,354 - +0.3
3,756,378 + -0.5
3,756,378 + -0.7
3,756,385 + +0.1
3,756,385 + +0.2
3,756,385 + -0.3
3,756,386 - -0.2
3,756,392 + -0.6
3,756,447 + -0.2
3,756,448 - +0.8
3,756,448 - -1.7
3,756,460 - -0.2
3,756,460 - -0.1
3,756,479 + -0.0
3,756,480 - +0.0
3,756,480 - -0.3
3,756,482 - -0.0
3,756,521 - -0.5
3,756,524 - +0.2
3,756,528 + -0.1
3,756,528 + -0.6
3,756,543 + +0.2
3,756,544 - +3.1
3,756,555 + -0.9
3,756,555 + +1.4
3,756,555 + -0.7
3,756,556 - +0.3
3,756,686 - ECD_03571 0.49 -0.8
3,756,827 - -0.9
3,756,850 + -1.2
3,756,851 - +0.5
3,756,976 + +1.1
3,756,977 - +1.7
3,756,977 - +0.0
3,757,128 - ECD_03572 0.22 -0.2
3,757,151 + ECD_03572 0.24 -0.2
3,757,225 - ECD_03572 0.30 -1.3
3,757,360 - ECD_03572 0.41 +0.1
3,757,360 - ECD_03572 0.41 +0.7
3,757,456 + ECD_03572 0.49 +1.7
3,757,456 + ECD_03572 0.49 -0.3
3,757,457 - ECD_03572 0.49 -0.0
3,757,457 - ECD_03572 0.49 +0.2
3,757,457 - ECD_03572 0.49 -0.4
3,757,506 - ECD_03572 0.53 -0.0
3,757,537 + ECD_03572 0.56 -0.3
3,757,538 - ECD_03572 0.56 -1.0
3,757,560 + ECD_03572 0.58 -0.3
3,757,560 + ECD_03572 0.58 +0.5
3,757,560 + ECD_03572 0.58 -1.5
3,757,560 + ECD_03572 0.58 +0.8
3,757,632 + ECD_03572 0.64 +0.7
3,757,632 + ECD_03572 0.64 -1.2
3,757,632 + ECD_03572 0.64 -1.3
3,757,632 + ECD_03572 0.64 -0.5
3,757,632 + ECD_03572 0.64 -0.1
3,757,632 + ECD_03572 0.64 -0.7
3,757,632 + ECD_03572 0.64 +1.2
3,757,633 - ECD_03572 0.64 -0.0
3,757,633 - ECD_03572 0.64 -0.3
3,757,633 - ECD_03572 0.64 +0.9
3,757,633 - ECD_03572 0.64 -0.2
3,757,633 - ECD_03572 0.64 +0.5
3,757,633 - ECD_03572 0.64 -0.7
3,757,633 - ECD_03572 0.64 -0.2
3,757,633 - ECD_03572 0.64 +0.5
3,757,633 - ECD_03572 0.64 +0.0
3,757,633 - ECD_03572 0.64 -1.0
3,757,633 - ECD_03572 0.64 -0.3
3,757,643 + ECD_03572 0.65 +0.9
3,757,645 + ECD_03572 0.65 -0.1
3,757,645 + ECD_03572 0.65 +0.1
3,757,645 + ECD_03572 0.65 +0.5
3,757,645 + ECD_03572 0.65 +1.1
3,757,645 + ECD_03572 0.65 +0.7
3,757,646 - ECD_03572 0.65 -0.6
3,757,646 - ECD_03572 0.65 +0.2
3,757,649 + ECD_03572 0.65 -0.7
3,757,650 - ECD_03572 0.65 +1.7
3,757,719 - ECD_03572 0.71 -0.2
3,757,846 + ECD_03572 0.81 +2.5
3,757,846 + ECD_03572 0.81 +1.0
3,757,847 - ECD_03572 0.81 -0.8
3,757,847 - ECD_03572 0.81 +0.2
3,757,847 - ECD_03572 0.81 -0.3
3,757,847 - ECD_03572 0.81 -0.2

Or see this region's nucleotide sequence