Strain Fitness in Escherichia coli BL21 around ECD_03267

Experiment: Bas63

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_03265 and ECD_03266 are separated by 58 nucleotidesECD_03266 and ECD_03267 are separated by 360 nucleotidesECD_03267 and ECD_03268 are separated by 44 nucleotides ECD_03265: ECD_03265 - DNA catabolic protein, at 3,405,243 to 3,405,926 _03265 ECD_03266: ECD_03266 - Fe/S biogenesis protein, putative scaffold/chaperone protein, at 3,405,985 to 3,406,560 _03266 ECD_03267: ECD_03267 - gluconate transporter, high-affinity GNT I system, at 3,406,921 to 3,408,237 _03267 ECD_03268: ECD_03268 - 4-alpha-glucanotransferase (amylomaltase), at 3,408,282 to 3,410,366 _03268 Position (kb) 3406 3407 3408 3409Strain fitness (log2 ratio) -2 -1 0 1 2at 3405.924 kb on + strandat 3405.925 kb on - strandat 3405.925 kb on - strandat 3405.945 kb on - strandat 3405.950 kb on - strandat 3405.957 kb on + strandat 3405.958 kb on - strandat 3405.993 kb on + strandat 3405.993 kb on + strandat 3406.112 kb on - strand, within ECD_03266at 3406.112 kb on - strand, within ECD_03266at 3406.174 kb on + strand, within ECD_03266at 3406.187 kb on + strand, within ECD_03266at 3406.188 kb on - strand, within ECD_03266at 3406.188 kb on - strand, within ECD_03266at 3406.198 kb on + strand, within ECD_03266at 3406.198 kb on + strand, within ECD_03266at 3406.282 kb on - strand, within ECD_03266at 3406.321 kb on + strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.322 kb on - strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.323 kb on + strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.324 kb on - strand, within ECD_03266at 3406.552 kb on + strandat 3406.552 kb on + strandat 3406.553 kb on - strandat 3406.553 kb on - strandat 3406.556 kb on - strandat 3406.556 kb on - strandat 3406.558 kb on + strandat 3406.558 kb on + strandat 3406.558 kb on + strandat 3406.559 kb on - strandat 3406.564 kb on - strandat 3406.577 kb on + strandat 3406.577 kb on + strandat 3406.597 kb on + strandat 3406.598 kb on - strandat 3406.617 kb on - strandat 3406.689 kb on - strandat 3406.689 kb on - strandat 3406.802 kb on - strandat 3406.839 kb on - strandat 3406.949 kb on + strandat 3407.052 kb on + strandat 3407.225 kb on + strand, within ECD_03267at 3407.238 kb on + strand, within ECD_03267at 3407.260 kb on + strand, within ECD_03267at 3407.260 kb on + strand, within ECD_03267at 3407.261 kb on - strand, within ECD_03267at 3407.332 kb on + strand, within ECD_03267at 3407.332 kb on + strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.333 kb on - strand, within ECD_03267at 3407.342 kb on + strand, within ECD_03267at 3407.343 kb on - strand, within ECD_03267at 3407.343 kb on - strand, within ECD_03267at 3407.437 kb on - strand, within ECD_03267at 3407.450 kb on - strand, within ECD_03267at 3407.457 kb on + strand, within ECD_03267at 3407.458 kb on - strand, within ECD_03267at 3407.621 kb on + strand, within ECD_03267at 3407.622 kb on - strand, within ECD_03267at 3407.891 kb on - strand, within ECD_03267at 3407.891 kb on - strand, within ECD_03267at 3407.891 kb on - strand, within ECD_03267at 3407.891 kb on - strand, within ECD_03267at 3408.079 kb on - strand, within ECD_03267at 3408.130 kb on + strandat 3408.283 kb on + strandat 3408.283 kb on + strandat 3408.283 kb on + strandat 3408.283 kb on + strandat 3408.399 kb on - strandat 3408.401 kb on - strandat 3408.463 kb on - strandat 3408.578 kb on - strand, within ECD_03268at 3408.578 kb on - strand, within ECD_03268at 3408.578 kb on - strand, within ECD_03268at 3408.578 kb on - strand, within ECD_03268at 3408.578 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.582 kb on - strand, within ECD_03268at 3408.818 kb on - strand, within ECD_03268at 3408.818 kb on - strand, within ECD_03268at 3408.893 kb on + strand, within ECD_03268at 3408.894 kb on - strand, within ECD_03268at 3408.909 kb on - strand, within ECD_03268at 3408.958 kb on + strand, within ECD_03268at 3408.959 kb on - strand, within ECD_03268at 3408.959 kb on - strand, within ECD_03268at 3408.959 kb on - strand, within ECD_03268at 3408.991 kb on - strand, within ECD_03268at 3409.085 kb on - strand, within ECD_03268at 3409.085 kb on - strand, within ECD_03268at 3409.085 kb on - strand, within ECD_03268at 3409.085 kb on - strand, within ECD_03268at 3409.104 kb on - strand, within ECD_03268at 3409.104 kb on - strand, within ECD_03268

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas63
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3,405,924 + -0.2
3,405,925 - +0.1
3,405,925 - +1.7
3,405,945 - +0.1
3,405,950 - -0.5
3,405,957 + -1.5
3,405,958 - -0.3
3,405,993 + +0.5
3,405,993 + -1.5
3,406,112 - ECD_03266 0.22 +1.1
3,406,112 - ECD_03266 0.22 -1.0
3,406,174 + ECD_03266 0.33 -0.5
3,406,187 + ECD_03266 0.35 +1.0
3,406,188 - ECD_03266 0.35 -0.0
3,406,188 - ECD_03266 0.35 +0.3
3,406,198 + ECD_03266 0.37 +0.3
3,406,198 + ECD_03266 0.37 -1.6
3,406,282 - ECD_03266 0.52 +0.3
3,406,321 + ECD_03266 0.58 +2.3
3,406,322 - ECD_03266 0.59 +1.9
3,406,322 - ECD_03266 0.59 -0.0
3,406,322 - ECD_03266 0.59 -1.6
3,406,323 + ECD_03266 0.59 +0.4
3,406,323 + ECD_03266 0.59 -2.1
3,406,323 + ECD_03266 0.59 +0.4
3,406,324 - ECD_03266 0.59 -0.5
3,406,324 - ECD_03266 0.59 -0.3
3,406,324 - ECD_03266 0.59 +0.1
3,406,324 - ECD_03266 0.59 +0.8
3,406,552 + +0.4
3,406,552 + -0.3
3,406,553 - +0.1
3,406,553 - -0.3
3,406,556 - -0.5
3,406,556 - -0.1
3,406,558 + +0.3
3,406,558 + +0.3
3,406,558 + -0.3
3,406,559 - +0.3
3,406,564 - +0.8
3,406,577 + -0.6
3,406,577 + +0.0
3,406,597 + -0.6
3,406,598 - +0.4
3,406,617 - +0.4
3,406,689 - +0.8
3,406,689 - +1.9
3,406,802 - -0.1
3,406,839 - +0.3
3,406,949 + -0.3
3,407,052 + -1.2
3,407,225 + ECD_03267 0.23 -0.5
3,407,238 + ECD_03267 0.24 +1.1
3,407,260 + ECD_03267 0.26 +0.2
3,407,260 + ECD_03267 0.26 +0.4
3,407,261 - ECD_03267 0.26 -1.4
3,407,332 + ECD_03267 0.31 -0.0
3,407,332 + ECD_03267 0.31 +0.0
3,407,333 - ECD_03267 0.31 -0.5
3,407,333 - ECD_03267 0.31 +1.0
3,407,333 - ECD_03267 0.31 +1.1
3,407,342 + ECD_03267 0.32 +0.8
3,407,343 - ECD_03267 0.32 -0.2
3,407,343 - ECD_03267 0.32 +0.3
3,407,437 - ECD_03267 0.39 -0.6
3,407,450 - ECD_03267 0.40 -0.3
3,407,457 + ECD_03267 0.41 -0.2
3,407,458 - ECD_03267 0.41 +0.1
3,407,621 + ECD_03267 0.53 -0.3
3,407,622 - ECD_03267 0.53 +0.1
3,407,891 - ECD_03267 0.74 -0.9
3,407,891 - ECD_03267 0.74 -0.9
3,407,891 - ECD_03267 0.74 -0.5
3,407,891 - ECD_03267 0.74 +0.1
3,408,079 - ECD_03267 0.88 +2.1
3,408,130 + -0.5
3,408,283 + +0.5
3,408,283 + +0.5
3,408,283 + +0.1
3,408,283 + +1.3
3,408,399 - -0.7
3,408,401 - +0.4
3,408,463 - -0.7
3,408,578 - ECD_03268 0.14 +0.2
3,408,578 - ECD_03268 0.14 +0.8
3,408,578 - ECD_03268 0.14 +0.5
3,408,578 - ECD_03268 0.14 -0.3
3,408,578 - ECD_03268 0.14 +1.0
3,408,582 - ECD_03268 0.14 -0.3
3,408,582 - ECD_03268 0.14 +0.5
3,408,582 - ECD_03268 0.14 -0.3
3,408,582 - ECD_03268 0.14 -0.0
3,408,582 - ECD_03268 0.14 -0.0
3,408,582 - ECD_03268 0.14 +0.5
3,408,582 - ECD_03268 0.14 -1.0
3,408,818 - ECD_03268 0.26 +0.8
3,408,818 - ECD_03268 0.26 -0.5
3,408,893 + ECD_03268 0.29 -1.0
3,408,894 - ECD_03268 0.29 +0.5
3,408,909 - ECD_03268 0.30 +1.2
3,408,958 + ECD_03268 0.32 +1.5
3,408,959 - ECD_03268 0.32 +0.3
3,408,959 - ECD_03268 0.32 +0.1
3,408,959 - ECD_03268 0.32 -0.2
3,408,991 - ECD_03268 0.34 +0.1
3,409,085 - ECD_03268 0.39 +0.3
3,409,085 - ECD_03268 0.39 -0.2
3,409,085 - ECD_03268 0.39 -0.6
3,409,085 - ECD_03268 0.39 -0.3
3,409,104 - ECD_03268 0.39 +0.2
3,409,104 - ECD_03268 0.39 +0.0

Or see this region's nucleotide sequence