Experiment: Bas63
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03097 and ECD_03098 are separated by 364 nucleotides ECD_03098 and ECD_03099 are separated by 55 nucleotides ECD_03099 and ECD_03100 are separated by 91 nucleotides
ECD_03097: ECD_03097 - l-arginine-responsive arginine metabolism regulon transcriptional regulator, at 3,245,865 to 3,246,335
_03097
ECD_03098: ECD_03098 - cadmium and peroxide resistance protein, stress-induced, at 3,246,700 to 3,246,963
_03098
ECD_03099: ECD_03099 - putative barnase inhibitor, at 3,247,019 to 3,247,291
_03099
ECD_03100: ECD_03100 - p-hydroxybenzoic acid efflux system component, at 3,247,383 to 3,249,350
_03100
Position (kb)
3247
3248 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3246.035 kb on + strand, within ECD_03097 at 3246.088 kb on + strand, within ECD_03097 at 3246.261 kb on - strand, within ECD_03097 at 3246.333 kb on + strand at 3246.464 kb on - strand at 3246.464 kb on - strand at 3246.728 kb on + strand, within ECD_03098 at 3246.818 kb on + strand, within ECD_03098 at 3246.818 kb on + strand, within ECD_03098 at 3246.818 kb on + strand, within ECD_03098 at 3246.825 kb on - strand, within ECD_03098 at 3246.852 kb on + strand, within ECD_03098 at 3247.034 kb on - strand at 3247.083 kb on - strand, within ECD_03099 at 3247.083 kb on - strand, within ECD_03099 at 3247.167 kb on - strand, within ECD_03099 at 3247.196 kb on + strand, within ECD_03099 at 3247.196 kb on + strand, within ECD_03099 at 3247.197 kb on - strand, within ECD_03099 at 3247.279 kb on + strand at 3247.282 kb on - strand at 3247.285 kb on + strand at 3247.341 kb on + strand at 3247.342 kb on - strand at 3247.343 kb on + strand at 3247.385 kb on - strand at 3247.408 kb on + strand at 3247.409 kb on - strand at 3247.412 kb on + strand at 3247.412 kb on + strand at 3247.412 kb on + strand at 3247.413 kb on - strand at 3247.413 kb on - strand at 3247.413 kb on - strand at 3247.413 kb on - strand at 3247.490 kb on - strand at 3247.522 kb on + strand at 3247.535 kb on + strand at 3247.557 kb on + strand at 3247.557 kb on + strand at 3247.557 kb on + strand at 3247.557 kb on + strand at 3247.557 kb on + strand at 3247.557 kb on + strand at 3247.558 kb on - strand at 3247.558 kb on - strand at 3247.558 kb on - strand at 3247.697 kb on + strand, within ECD_03100 at 3247.698 kb on - strand, within ECD_03100 at 3247.698 kb on - strand, within ECD_03100 at 3247.724 kb on - strand, within ECD_03100 at 3247.766 kb on + strand, within ECD_03100 at 3247.767 kb on - strand, within ECD_03100 at 3247.802 kb on + strand, within ECD_03100 at 3247.803 kb on - strand, within ECD_03100 at 3247.809 kb on + strand, within ECD_03100 at 3247.810 kb on - strand, within ECD_03100 at 3247.810 kb on - strand, within ECD_03100 at 3247.810 kb on - strand, within ECD_03100 at 3247.853 kb on + strand, within ECD_03100 at 3247.890 kb on + strand, within ECD_03100 at 3247.949 kb on + strand, within ECD_03100 at 3247.949 kb on + strand, within ECD_03100 at 3247.949 kb on + strand, within ECD_03100 at 3247.950 kb on - strand, within ECD_03100 at 3247.950 kb on - strand, within ECD_03100 at 3247.950 kb on - strand, within ECD_03100 at 3247.954 kb on - strand, within ECD_03100 at 3247.999 kb on - strand, within ECD_03100 at 3248.004 kb on + strand, within ECD_03100 at 3248.004 kb on + strand, within ECD_03100 at 3248.005 kb on - strand, within ECD_03100 at 3248.005 kb on - strand, within ECD_03100 at 3248.005 kb on - strand, within ECD_03100 at 3248.005 kb on - strand, within ECD_03100 at 3248.037 kb on - strand, within ECD_03100 at 3248.037 kb on - strand, within ECD_03100 at 3248.039 kb on + strand, within ECD_03100 at 3248.039 kb on + strand, within ECD_03100 at 3248.039 kb on + strand, within ECD_03100 at 3248.039 kb on + strand, within ECD_03100 at 3248.040 kb on - strand, within ECD_03100 at 3248.075 kb on + strand, within ECD_03100 at 3248.129 kb on + strand, within ECD_03100 at 3248.129 kb on + strand, within ECD_03100 at 3248.130 kb on - strand, within ECD_03100 at 3248.130 kb on - strand, within ECD_03100
Per-strain Table
Position Strand Gene LocusTag Fraction Bas63 remove 3,246,035 + ECD_03097 0.36 -1.5 3,246,088 + ECD_03097 0.47 +0.5 3,246,261 - ECD_03097 0.84 -0.2 3,246,333 + -0.3 3,246,464 - +0.8 3,246,464 - +0.7 3,246,728 + ECD_03098 0.11 +0.2 3,246,818 + ECD_03098 0.45 +2.1 3,246,818 + ECD_03098 0.45 +0.1 3,246,818 + ECD_03098 0.45 +0.5 3,246,825 - ECD_03098 0.47 +0.5 3,246,852 + ECD_03098 0.58 +0.5 3,247,034 - -0.0 3,247,083 - ECD_03099 0.23 -0.3 3,247,083 - ECD_03099 0.23 -0.6 3,247,167 - ECD_03099 0.54 -0.7 3,247,196 + ECD_03099 0.65 -0.9 3,247,196 + ECD_03099 0.65 -2.2 3,247,197 - ECD_03099 0.65 -2.3 3,247,279 + -0.1 3,247,282 - -0.2 3,247,285 + +0.7 3,247,341 + -0.2 3,247,342 - -2.7 3,247,343 + -0.6 3,247,385 - -1.6 3,247,408 + +0.1 3,247,409 - +1.2 3,247,412 + +0.7 3,247,412 + +0.7 3,247,412 + -0.0 3,247,413 - -0.9 3,247,413 - -0.2 3,247,413 - +0.4 3,247,413 - +0.6 3,247,490 - +0.5 3,247,522 + +0.4 3,247,535 + +0.3 3,247,557 + -0.0 3,247,557 + -2.3 3,247,557 + +0.4 3,247,557 + -0.8 3,247,557 + +0.2 3,247,557 + +0.3 3,247,558 - +0.6 3,247,558 - +1.3 3,247,558 - +0.0 3,247,697 + ECD_03100 0.16 -2.6 3,247,698 - ECD_03100 0.16 +0.1 3,247,698 - ECD_03100 0.16 +0.5 3,247,724 - ECD_03100 0.17 -0.9 3,247,766 + ECD_03100 0.19 -0.1 3,247,767 - ECD_03100 0.20 -0.2 3,247,802 + ECD_03100 0.21 -0.8 3,247,803 - ECD_03100 0.21 -0.1 3,247,809 + ECD_03100 0.22 -0.3 3,247,810 - ECD_03100 0.22 +0.1 3,247,810 - ECD_03100 0.22 +0.0 3,247,810 - ECD_03100 0.22 -0.0 3,247,853 + ECD_03100 0.24 +0.8 3,247,890 + ECD_03100 0.26 -0.9 3,247,949 + ECD_03100 0.29 -0.6 3,247,949 + ECD_03100 0.29 +0.4 3,247,949 + ECD_03100 0.29 +0.2 3,247,950 - ECD_03100 0.29 +0.3 3,247,950 - ECD_03100 0.29 +0.3 3,247,950 - ECD_03100 0.29 +0.2 3,247,954 - ECD_03100 0.29 -0.3 3,247,999 - ECD_03100 0.31 +0.3 3,248,004 + ECD_03100 0.32 +1.0 3,248,004 + ECD_03100 0.32 +0.5 3,248,005 - ECD_03100 0.32 -0.2 3,248,005 - ECD_03100 0.32 +0.5 3,248,005 - ECD_03100 0.32 +0.0 3,248,005 - ECD_03100 0.32 -0.3 3,248,037 - ECD_03100 0.33 -0.5 3,248,037 - ECD_03100 0.33 +0.9 3,248,039 + ECD_03100 0.33 +0.9 3,248,039 + ECD_03100 0.33 -0.2 3,248,039 + ECD_03100 0.33 +1.1 3,248,039 + ECD_03100 0.33 -0.2 3,248,040 - ECD_03100 0.33 +0.5 3,248,075 + ECD_03100 0.35 -1.7 3,248,129 + ECD_03100 0.38 +1.5 3,248,129 + ECD_03100 0.38 -0.1 3,248,130 - ECD_03100 0.38 +0.3 3,248,130 - ECD_03100 0.38 +0.7
Or see this region's nucleotide sequence