Experiment: Bas63
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03463 and ECD_03464 are separated by 153 nucleotides ECD_03464 and ECD_03465 are separated by 52 nucleotides ECD_03465 and ECD_03466 are separated by 79 nucleotides
ECD_03463: ECD_03463 - L-lactate dehydrogenase, FMN-linked, at 3,649,072 to 3,650,262
_03463
ECD_03464: ECD_03464 - tRNA Leu mC34,mU34 2'-O-methyltransferase, SAM-dependent, at 3,650,416 to 3,650,889
_03464
ECD_03465: ECD_03465 - serine acetyltransferase, at 3,650,942 to 3,651,763
_03465
ECD_03466: ECD_03466 - glycerol-3-phosphate dehydrogenase (NAD+), at 3,651,843 to 3,652,862
_03466
Position (kb)
3650
3651
3652 Strain fitness (log2 ratio)
-2
-1
0
1 at 3649.948 kb on - strand, within ECD_03463 at 3649.948 kb on - strand, within ECD_03463 at 3649.948 kb on - strand, within ECD_03463 at 3649.971 kb on + strand, within ECD_03463 at 3649.973 kb on + strand, within ECD_03463 at 3649.974 kb on - strand, within ECD_03463 at 3650.022 kb on + strand, within ECD_03463 at 3650.048 kb on + strand, within ECD_03463 at 3650.049 kb on - strand, within ECD_03463 at 3650.071 kb on + strand, within ECD_03463 at 3650.103 kb on - strand, within ECD_03463 at 3650.114 kb on + strand, within ECD_03463 at 3650.114 kb on + strand, within ECD_03463 at 3650.415 kb on + strand at 3650.416 kb on - strand at 3650.420 kb on + strand at 3650.420 kb on + strand at 3650.421 kb on - strand at 3650.429 kb on + strand at 3650.430 kb on - strand at 3650.434 kb on + strand at 3650.686 kb on + strand, within ECD_03464 at 3650.686 kb on + strand, within ECD_03464 at 3650.702 kb on - strand, within ECD_03464 at 3650.840 kb on - strand, within ECD_03464 at 3650.887 kb on + strand at 3650.887 kb on + strand at 3650.887 kb on + strand at 3650.888 kb on - strand at 3650.888 kb on - strand at 3650.888 kb on - strand at 3650.891 kb on + strand at 3650.891 kb on + strand at 3650.891 kb on + strand at 3650.892 kb on - strand at 3650.896 kb on + strand at 3650.896 kb on + strand at 3650.896 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.913 kb on + strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.914 kb on - strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.943 kb on + strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.944 kb on - strand at 3650.968 kb on + strand at 3650.969 kb on - strand at 3650.969 kb on - strand at 3650.969 kb on - strand at 3650.975 kb on - strand at 3651.038 kb on - strand, within ECD_03465 at 3651.785 kb on + strand at 3651.785 kb on + strand at 3651.786 kb on - strand at 3651.786 kb on - strand at 3651.825 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas63 remove 3,649,948 - ECD_03463 0.74 -0.2 3,649,948 - ECD_03463 0.74 -0.1 3,649,948 - ECD_03463 0.74 +1.5 3,649,971 + ECD_03463 0.75 +0.3 3,649,973 + ECD_03463 0.76 -0.2 3,649,974 - ECD_03463 0.76 -1.0 3,650,022 + ECD_03463 0.80 -0.2 3,650,048 + ECD_03463 0.82 +0.1 3,650,049 - ECD_03463 0.82 +0.8 3,650,071 + ECD_03463 0.84 -1.9 3,650,103 - ECD_03463 0.87 +0.8 3,650,114 + ECD_03463 0.87 -0.0 3,650,114 + ECD_03463 0.87 +0.5 3,650,415 + -0.1 3,650,416 - +1.5 3,650,420 + -0.7 3,650,420 + +0.4 3,650,421 - -0.2 3,650,429 + +0.2 3,650,430 - -0.5 3,650,434 + +0.2 3,650,686 + ECD_03464 0.57 -1.6 3,650,686 + ECD_03464 0.57 +0.1 3,650,702 - ECD_03464 0.60 -0.1 3,650,840 - ECD_03464 0.89 -0.1 3,650,887 + -0.5 3,650,887 + -0.5 3,650,887 + -0.8 3,650,888 - +0.9 3,650,888 - -0.5 3,650,888 - +0.4 3,650,891 + -1.8 3,650,891 + -0.0 3,650,891 + +0.9 3,650,892 - +0.1 3,650,896 + +1.2 3,650,896 + +0.6 3,650,896 + +0.7 3,650,913 + +1.0 3,650,913 + +0.0 3,650,913 + +0.2 3,650,913 + -0.5 3,650,914 - +0.1 3,650,914 - +0.8 3,650,914 - +0.1 3,650,914 - -0.0 3,650,914 - -0.7 3,650,914 - -0.9 3,650,914 - +0.9 3,650,914 - +0.1 3,650,943 + +0.1 3,650,943 + +0.2 3,650,943 + +0.5 3,650,943 + +1.3 3,650,943 + +0.0 3,650,943 + +0.3 3,650,943 + -0.3 3,650,944 - -0.6 3,650,944 - +1.4 3,650,944 - +0.5 3,650,944 - -0.0 3,650,944 - -0.4 3,650,944 - +0.1 3,650,944 - +0.6 3,650,944 - +0.4 3,650,968 + +1.1 3,650,969 - +1.3 3,650,969 - +0.5 3,650,969 - +0.7 3,650,975 - +0.5 3,651,038 - ECD_03465 0.12 -1.5 3,651,785 + +1.0 3,651,785 + -0.4 3,651,786 - -2.2 3,651,786 - -0.7 3,651,825 - +0.1
Or see this region's nucleotide sequence