Strain Fitness in Escherichia coli BL21 around ECD_04270

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04268 and ECD_04269 are separated by 89 nucleotidesECD_04269 and ECD_04270 are separated by 84 nucleotidesECD_04270 and ECD_04271 are separated by 51 nucleotidesECD_04271 and ECD_04272 overlap by 4 nucleotides ECD_04268: ECD_04268 - lytic murein transglycosylase, soluble, at 4,548,087 to 4,550,024 _04268 ECD_04269: ECD_04269 - transcriptional repressor, tryptophan-binding, at 4,550,114 to 4,550,440 _04269 ECD_04270: ECD_04270 - non-canonical purine NTP phosphatase, ITPase/XTPase, at 4,550,525 to 4,551,046 _04270 ECD_04271: ECD_04271 - phosphatase, at 4,551,098 to 4,551,745 _04271 ECD_04272: ECD_04272 - right oriC-binding transcriptional activator, AraC family, at 4,551,742 to 4,552,611 _04272 Position (kb) 4550 4551 4552Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 4549.525 kb on - strand, within ECD_04268at 4549.545 kb on + strand, within ECD_04268at 4549.545 kb on + strand, within ECD_04268at 4549.546 kb on - strand, within ECD_04268at 4549.658 kb on + strand, within ECD_04268at 4549.659 kb on - strand, within ECD_04268at 4549.667 kb on + strand, within ECD_04268at 4549.668 kb on - strand, within ECD_04268at 4549.679 kb on + strand, within ECD_04268at 4549.709 kb on + strand, within ECD_04268at 4549.709 kb on + strand, within ECD_04268at 4549.710 kb on - strand, within ECD_04268at 4549.710 kb on - strand, within ECD_04268at 4549.764 kb on + strand, within ECD_04268at 4549.774 kb on - strand, within ECD_04268at 4549.774 kb on - strand, within ECD_04268at 4549.803 kb on - strand, within ECD_04268at 4549.822 kb on - strand, within ECD_04268at 4549.901 kb on + strandat 4549.926 kb on + strandat 4549.927 kb on - strandat 4549.927 kb on - strandat 4549.931 kb on - strandat 4549.948 kb on - strandat 4549.956 kb on + strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.957 kb on - strandat 4549.959 kb on + strandat 4549.959 kb on + strandat 4550.035 kb on + strandat 4550.036 kb on - strandat 4550.040 kb on + strandat 4550.041 kb on - strandat 4550.045 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.110 kb on + strandat 4550.111 kb on - strandat 4550.111 kb on - strandat 4550.111 kb on - strandat 4550.113 kb on + strandat 4550.113 kb on + strandat 4550.191 kb on + strand, within ECD_04269at 4550.191 kb on + strand, within ECD_04269at 4550.220 kb on + strand, within ECD_04269at 4550.229 kb on + strand, within ECD_04269at 4550.230 kb on - strand, within ECD_04269at 4550.538 kb on + strandat 4550.540 kb on + strandat 4550.540 kb on + strandat 4550.540 kb on + strandat 4550.541 kb on - strandat 4550.666 kb on - strand, within ECD_04270at 4550.666 kb on - strand, within ECD_04270at 4550.741 kb on - strand, within ECD_04270at 4550.953 kb on + strand, within ECD_04270at 4551.047 kb on - strandat 4551.075 kb on - strandat 4551.075 kb on - strandat 4551.083 kb on - strandat 4551.083 kb on - strandat 4551.102 kb on + strandat 4551.103 kb on - strandat 4551.108 kb on + strandat 4551.109 kb on - strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.110 kb on + strandat 4551.111 kb on - strandat 4551.111 kb on - strandat 4551.114 kb on + strandat 4551.114 kb on + strandat 4551.114 kb on + strandat 4551.115 kb on - strandat 4551.115 kb on - strandat 4551.115 kb on - strandat 4551.154 kb on + strandat 4551.247 kb on + strand, within ECD_04271at 4551.248 kb on - strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.345 kb on + strand, within ECD_04271at 4551.346 kb on - strand, within ECD_04271at 4551.373 kb on + strand, within ECD_04271at 4551.442 kb on + strand, within ECD_04271at 4551.443 kb on - strand, within ECD_04271at 4551.574 kb on + strand, within ECD_04271at 4551.613 kb on - strand, within ECD_04271at 4551.622 kb on + strand, within ECD_04271at 4551.623 kb on - strand, within ECD_04271at 4551.632 kb on - strand, within ECD_04271at 4551.726 kb on + strandat 4551.726 kb on + strandat 4551.726 kb on + strandat 4551.726 kb on + strandat 4551.727 kb on - strandat 4551.781 kb on - strandat 4551.882 kb on - strand, within ECD_04272at 4551.894 kb on + strand, within ECD_04272at 4551.926 kb on + strand, within ECD_04272at 4551.927 kb on - strand, within ECD_04272at 4551.927 kb on - strand, within ECD_04272at 4551.931 kb on - strand, within ECD_04272at 4551.931 kb on - strand, within ECD_04272at 4551.942 kb on - strand, within ECD_04272at 4551.979 kb on + strand, within ECD_04272at 4551.980 kb on - strand, within ECD_04272at 4551.980 kb on - strand, within ECD_04272at 4551.984 kb on - strand, within ECD_04272at 4551.984 kb on - strand, within ECD_04272at 4552.018 kb on - strand, within ECD_04272at 4552.019 kb on + strand, within ECD_04272at 4552.019 kb on + strand, within ECD_04272at 4552.020 kb on - strand, within ECD_04272at 4552.025 kb on - strand, within ECD_04272at 4552.025 kb on - strand, within ECD_04272

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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4,549,525 - ECD_04268 0.74 +1.3
4,549,545 + ECD_04268 0.75 +1.2
4,549,545 + ECD_04268 0.75 +0.6
4,549,546 - ECD_04268 0.75 +0.2
4,549,658 + ECD_04268 0.81 +0.2
4,549,659 - ECD_04268 0.81 -0.9
4,549,667 + ECD_04268 0.82 +0.5
4,549,668 - ECD_04268 0.82 -0.0
4,549,679 + ECD_04268 0.82 +1.2
4,549,709 + ECD_04268 0.84 +0.1
4,549,709 + ECD_04268 0.84 -0.2
4,549,710 - ECD_04268 0.84 -0.3
4,549,710 - ECD_04268 0.84 -0.0
4,549,764 + ECD_04268 0.87 +0.4
4,549,774 - ECD_04268 0.87 +0.3
4,549,774 - ECD_04268 0.87 +0.8
4,549,803 - ECD_04268 0.89 +0.5
4,549,822 - ECD_04268 0.90 +0.0
4,549,901 + +2.6
4,549,926 + -2.5
4,549,927 - -0.2
4,549,927 - +0.3
4,549,931 - -2.3
4,549,948 - -0.0
4,549,956 + +0.3
4,549,957 - -0.6
4,549,957 - +1.2
4,549,957 - +0.3
4,549,957 - +0.1
4,549,959 + +0.6
4,549,959 + -0.2
4,550,035 + +0.6
4,550,036 - +1.0
4,550,040 + +1.6
4,550,041 - +0.5
4,550,045 + +0.3
4,550,110 + -0.0
4,550,110 + -0.4
4,550,110 + +0.3
4,550,110 + -1.0
4,550,110 + -0.3
4,550,110 + -0.0
4,550,110 + -0.8
4,550,110 + -1.0
4,550,111 - +0.9
4,550,111 - -0.8
4,550,111 - +1.2
4,550,113 + +1.0
4,550,113 + -1.0
4,550,191 + ECD_04269 0.24 +1.2
4,550,191 + ECD_04269 0.24 +0.6
4,550,220 + ECD_04269 0.32 +1.0
4,550,229 + ECD_04269 0.35 -0.0
4,550,230 - ECD_04269 0.35 +0.2
4,550,538 + -0.5
4,550,540 + -1.0
4,550,540 + -0.8
4,550,540 + +0.4
4,550,541 - +2.5
4,550,666 - ECD_04270 0.27 +0.3
4,550,666 - ECD_04270 0.27 -1.6
4,550,741 - ECD_04270 0.41 -0.6
4,550,953 + ECD_04270 0.82 -0.5
4,551,047 - +1.4
4,551,075 - +1.2
4,551,075 - +0.9
4,551,083 - -0.5
4,551,083 - +1.0
4,551,102 + +0.1
4,551,103 - +0.3
4,551,108 + +0.6
4,551,109 - +0.2
4,551,110 + +0.1
4,551,110 + -0.1
4,551,110 + -0.1
4,551,110 + +0.7
4,551,110 + +0.7
4,551,110 + -0.1
4,551,111 - +0.6
4,551,111 - +1.4
4,551,114 + +1.5
4,551,114 + +0.3
4,551,114 + -0.4
4,551,115 - -0.4
4,551,115 - +1.4
4,551,115 - +1.0
4,551,154 + -1.0
4,551,247 + ECD_04271 0.23 +0.6
4,551,248 - ECD_04271 0.23 -0.0
4,551,345 + ECD_04271 0.38 -0.8
4,551,345 + ECD_04271 0.38 +2.6
4,551,345 + ECD_04271 0.38 +0.3
4,551,345 + ECD_04271 0.38 +0.2
4,551,346 - ECD_04271 0.38 +2.0
4,551,373 + ECD_04271 0.42 -0.0
4,551,442 + ECD_04271 0.53 +2.8
4,551,443 - ECD_04271 0.53 +0.5
4,551,574 + ECD_04271 0.73 +1.6
4,551,613 - ECD_04271 0.79 +0.1
4,551,622 + ECD_04271 0.81 +1.3
4,551,623 - ECD_04271 0.81 -0.6
4,551,632 - ECD_04271 0.82 +1.0
4,551,726 + -0.6
4,551,726 + +4.4
4,551,726 + +0.2
4,551,726 + +0.5
4,551,727 - +1.0
4,551,781 - +0.2
4,551,882 - ECD_04272 0.16 -0.0
4,551,894 + ECD_04272 0.17 -0.7
4,551,926 + ECD_04272 0.21 -0.1
4,551,927 - ECD_04272 0.21 +0.7
4,551,927 - ECD_04272 0.21 -0.4
4,551,931 - ECD_04272 0.22 -0.3
4,551,931 - ECD_04272 0.22 -0.0
4,551,942 - ECD_04272 0.23 -0.3
4,551,979 + ECD_04272 0.27 +0.1
4,551,980 - ECD_04272 0.27 -0.6
4,551,980 - ECD_04272 0.27 -0.2
4,551,984 - ECD_04272 0.28 +0.2
4,551,984 - ECD_04272 0.28 +0.2
4,552,018 - ECD_04272 0.32 +0.5
4,552,019 + ECD_04272 0.32 +1.7
4,552,019 + ECD_04272 0.32 -0.2
4,552,020 - ECD_04272 0.32 +0.6
4,552,025 - ECD_04272 0.33 -0.4
4,552,025 - ECD_04272 0.33 -0.6

Or see this region's nucleotide sequence