Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04191 and ECD_04192 are separated by 80 nucleotides ECD_04192 and ECD_04193 are separated by 214 nucleotides
ECD_04191: ECD_04191 - mannonate hydrolase, at 4,460,915 to 4,462,099
_04191
ECD_04192: ECD_04192 - D-mannonate oxidoreductase, NAD-dependent, at 4,462,180 to 4,463,640
_04192
ECD_04193: ECD_04193 - fructuronate-inducible hexuronate regulon transcriptional repressor; autorepressor, at 4,463,855 to 4,464,628
_04193
Position (kb)
4462
4463
4464 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4461.219 kb on - strand, within ECD_04191 at 4461.264 kb on - strand, within ECD_04191 at 4461.406 kb on + strand, within ECD_04191 at 4461.407 kb on - strand, within ECD_04191 at 4461.440 kb on - strand, within ECD_04191 at 4461.476 kb on + strand, within ECD_04191 at 4461.477 kb on - strand, within ECD_04191 at 4461.512 kb on + strand, within ECD_04191 at 4461.513 kb on - strand, within ECD_04191 at 4461.521 kb on - strand, within ECD_04191 at 4461.601 kb on + strand, within ECD_04191 at 4461.673 kb on + strand, within ECD_04191 at 4461.674 kb on - strand, within ECD_04191 at 4461.719 kb on - strand, within ECD_04191 at 4461.770 kb on - strand, within ECD_04191 at 4461.770 kb on - strand, within ECD_04191 at 4461.794 kb on - strand, within ECD_04191 at 4461.797 kb on + strand, within ECD_04191 at 4461.880 kb on + strand, within ECD_04191 at 4461.881 kb on - strand, within ECD_04191 at 4461.881 kb on - strand, within ECD_04191 at 4461.881 kb on - strand, within ECD_04191 at 4461.884 kb on + strand, within ECD_04191 at 4461.884 kb on + strand, within ECD_04191 at 4461.884 kb on + strand, within ECD_04191 at 4461.884 kb on + strand, within ECD_04191 at 4461.885 kb on - strand, within ECD_04191 at 4461.885 kb on - strand, within ECD_04191 at 4461.885 kb on - strand, within ECD_04191 at 4461.885 kb on - strand, within ECD_04191 at 4461.885 kb on - strand, within ECD_04191 at 4462.016 kb on + strand at 4462.016 kb on + strand at 4462.098 kb on - strand at 4462.177 kb on - strand at 4462.185 kb on + strand at 4462.188 kb on + strand at 4462.188 kb on + strand at 4462.188 kb on + strand at 4462.300 kb on + strand at 4462.300 kb on + strand at 4462.301 kb on - strand at 4462.301 kb on - strand at 4462.301 kb on - strand at 4462.353 kb on + strand, within ECD_04192 at 4462.414 kb on + strand, within ECD_04192 at 4462.509 kb on + strand, within ECD_04192 at 4462.509 kb on + strand, within ECD_04192 at 4462.510 kb on - strand, within ECD_04192 at 4462.670 kb on - strand, within ECD_04192 at 4462.720 kb on - strand, within ECD_04192 at 4462.971 kb on + strand, within ECD_04192 at 4462.972 kb on - strand, within ECD_04192 at 4463.058 kb on + strand, within ECD_04192 at 4463.277 kb on + strand, within ECD_04192 at 4463.277 kb on + strand, within ECD_04192 at 4463.277 kb on + strand, within ECD_04192 at 4463.277 kb on + strand, within ECD_04192 at 4463.405 kb on - strand, within ECD_04192 at 4463.489 kb on - strand, within ECD_04192 at 4463.590 kb on + strand at 4463.590 kb on + strand at 4463.591 kb on - strand at 4463.638 kb on + strand at 4463.683 kb on - strand at 4463.719 kb on + strand at 4463.748 kb on - strand at 4463.748 kb on - strand at 4463.748 kb on - strand at 4464.068 kb on + strand, within ECD_04193 at 4464.068 kb on + strand, within ECD_04193 at 4464.069 kb on - strand, within ECD_04193
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 4,461,219 - ECD_04191 0.26 +0.2 4,461,264 - ECD_04191 0.29 +0.2 4,461,406 + ECD_04191 0.41 -0.5 4,461,407 - ECD_04191 0.42 -0.6 4,461,440 - ECD_04191 0.44 +0.5 4,461,476 + ECD_04191 0.47 -0.6 4,461,477 - ECD_04191 0.47 +0.7 4,461,512 + ECD_04191 0.50 +0.2 4,461,513 - ECD_04191 0.50 -0.0 4,461,521 - ECD_04191 0.51 +0.2 4,461,601 + ECD_04191 0.58 -1.6 4,461,673 + ECD_04191 0.64 +1.0 4,461,674 - ECD_04191 0.64 +1.0 4,461,719 - ECD_04191 0.68 +0.2 4,461,770 - ECD_04191 0.72 +1.0 4,461,770 - ECD_04191 0.72 +0.3 4,461,794 - ECD_04191 0.74 +0.2 4,461,797 + ECD_04191 0.74 -0.5 4,461,880 + ECD_04191 0.81 -0.0 4,461,881 - ECD_04191 0.82 -0.0 4,461,881 - ECD_04191 0.82 -0.0 4,461,881 - ECD_04191 0.82 -0.7 4,461,884 + ECD_04191 0.82 +0.3 4,461,884 + ECD_04191 0.82 -2.0 4,461,884 + ECD_04191 0.82 +0.8 4,461,884 + ECD_04191 0.82 -0.0 4,461,885 - ECD_04191 0.82 -0.2 4,461,885 - ECD_04191 0.82 +1.3 4,461,885 - ECD_04191 0.82 +0.1 4,461,885 - ECD_04191 0.82 +0.8 4,461,885 - ECD_04191 0.82 -0.3 4,462,016 + -0.0 4,462,016 + +1.4 4,462,098 - +1.0 4,462,177 - +0.8 4,462,185 + -0.7 4,462,188 + -1.2 4,462,188 + +2.4 4,462,188 + -0.3 4,462,300 + +0.1 4,462,300 + +0.8 4,462,301 - -0.0 4,462,301 - -1.0 4,462,301 - +1.0 4,462,353 + ECD_04192 0.12 +1.0 4,462,414 + ECD_04192 0.16 -0.6 4,462,509 + ECD_04192 0.23 +0.5 4,462,509 + ECD_04192 0.23 +0.6 4,462,510 - ECD_04192 0.23 -0.7 4,462,670 - ECD_04192 0.34 +0.5 4,462,720 - ECD_04192 0.37 -0.0 4,462,971 + ECD_04192 0.54 +0.1 4,462,972 - ECD_04192 0.54 -0.0 4,463,058 + ECD_04192 0.60 -0.3 4,463,277 + ECD_04192 0.75 -0.9 4,463,277 + ECD_04192 0.75 +0.1 4,463,277 + ECD_04192 0.75 +0.0 4,463,277 + ECD_04192 0.75 +0.3 4,463,405 - ECD_04192 0.84 -0.8 4,463,489 - ECD_04192 0.90 +0.3 4,463,590 + +0.7 4,463,590 + +0.5 4,463,591 - +0.2 4,463,638 + +1.6 4,463,683 - +1.2 4,463,719 + +0.8 4,463,748 - -1.0 4,463,748 - -0.4 4,463,748 - -0.4 4,464,068 + ECD_04193 0.28 +1.8 4,464,068 + ECD_04193 0.28 +0.5 4,464,069 - ECD_04193 0.28 +1.0
Or see this region's nucleotide sequence