Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03826 and ECD_03827 are separated by 348 nucleotides ECD_03827 and ECD_03828 are separated by 328 nucleotides
ECD_03826: ECD_03826 - Bifunctional aspartokinase/homoserine dehydrogenase 2, at 4,038,382 to 4,040,814
_03826
ECD_03827: ECD_03827 - 5,10-methylenetetrahydrofolate reductase, at 4,041,163 to 4,042,053
_03827
ECD_03828: ECD_03828 - catalase-peroxidase HPI, heme b-containing, at 4,042,382 to 4,044,562
_03828
Position (kb)
4041
4042
4043 Strain fitness (log2 ratio)
-1
0
1
2
3
4 at 4040.176 kb on + strand, within ECD_03826 at 4040.176 kb on + strand, within ECD_03826 at 4040.176 kb on + strand, within ECD_03826 at 4040.177 kb on - strand, within ECD_03826 at 4040.247 kb on + strand, within ECD_03826 at 4040.248 kb on - strand, within ECD_03826 at 4040.248 kb on - strand, within ECD_03826 at 4040.248 kb on - strand, within ECD_03826 at 4040.437 kb on + strand, within ECD_03826 at 4040.437 kb on + strand, within ECD_03826 at 4040.437 kb on + strand, within ECD_03826 at 4040.459 kb on + strand, within ECD_03826 at 4040.460 kb on - strand, within ECD_03826 at 4040.460 kb on - strand, within ECD_03826 at 4040.630 kb on + strand at 4040.631 kb on - strand at 4040.839 kb on + strand at 4040.937 kb on + strand at 4040.938 kb on - strand at 4040.941 kb on + strand at 4040.941 kb on + strand at 4040.941 kb on + strand at 4040.949 kb on + strand at 4040.950 kb on - strand at 4040.950 kb on - strand at 4040.955 kb on - strand at 4040.957 kb on - strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.133 kb on + strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.134 kb on - strand at 4041.135 kb on + strand at 4041.135 kb on + strand at 4041.135 kb on + strand at 4041.135 kb on + strand at 4041.135 kb on + strand at 4041.135 kb on + strand at 4041.136 kb on - strand at 4041.136 kb on - strand at 4041.136 kb on - strand at 4041.139 kb on + strand at 4041.139 kb on + strand at 4041.140 kb on - strand at 4041.140 kb on - strand at 4041.140 kb on - strand at 4041.157 kb on + strand at 4041.157 kb on + strand at 4041.157 kb on + strand at 4041.157 kb on + strand at 4041.162 kb on + strand at 4041.163 kb on - strand at 4041.163 kb on - strand at 4041.307 kb on - strand, within ECD_03827 at 4041.307 kb on - strand, within ECD_03827 at 4041.340 kb on + strand, within ECD_03827 at 4041.340 kb on + strand, within ECD_03827 at 4041.341 kb on - strand, within ECD_03827 at 4041.341 kb on - strand, within ECD_03827 at 4041.381 kb on + strand, within ECD_03827 at 4041.384 kb on + strand, within ECD_03827 at 4041.429 kb on + strand, within ECD_03827 at 4041.429 kb on + strand, within ECD_03827 at 4041.429 kb on + strand, within ECD_03827 at 4041.429 kb on + strand, within ECD_03827 at 4041.430 kb on - strand, within ECD_03827 at 4041.430 kb on - strand, within ECD_03827 at 4041.430 kb on - strand, within ECD_03827 at 4041.492 kb on + strand, within ECD_03827 at 4041.540 kb on + strand, within ECD_03827 at 4041.553 kb on + strand, within ECD_03827 at 4041.553 kb on + strand, within ECD_03827 at 4041.578 kb on + strand, within ECD_03827 at 4041.578 kb on + strand, within ECD_03827 at 4041.807 kb on + strand, within ECD_03827 at 4041.807 kb on + strand, within ECD_03827 at 4041.852 kb on + strand, within ECD_03827 at 4041.852 kb on + strand, within ECD_03827 at 4041.927 kb on + strand, within ECD_03827 at 4041.939 kb on + strand, within ECD_03827 at 4041.940 kb on - strand, within ECD_03827 at 4041.985 kb on + strand at 4041.986 kb on - strand at 4041.986 kb on - strand at 4041.986 kb on - strand at 4042.051 kb on + strand at 4042.051 kb on + strand at 4042.051 kb on + strand at 4042.051 kb on + strand at 4042.051 kb on + strand at 4042.052 kb on - strand at 4042.055 kb on + strand at 4042.055 kb on + strand at 4042.056 kb on - strand at 4042.056 kb on - strand at 4042.140 kb on - strand at 4042.170 kb on - strand at 4042.170 kb on - strand at 4042.189 kb on - strand at 4042.262 kb on + strand at 4042.282 kb on + strand at 4042.282 kb on + strand at 4042.283 kb on - strand at 4042.283 kb on - strand at 4042.287 kb on - strand at 4042.287 kb on - strand at 4042.323 kb on + strand at 4042.325 kb on + strand at 4042.326 kb on - strand at 4042.336 kb on + strand at 4042.346 kb on + strand at 4042.365 kb on + strand at 4042.519 kb on - strand at 4042.532 kb on - strand at 4042.596 kb on - strand at 4042.667 kb on + strand, within ECD_03828 at 4042.791 kb on + strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.792 kb on - strand, within ECD_03828 at 4042.838 kb on + strand, within ECD_03828 at 4042.838 kb on + strand, within ECD_03828 at 4042.839 kb on - strand, within ECD_03828 at 4042.870 kb on + strand, within ECD_03828 at 4042.912 kb on + strand, within ECD_03828 at 4042.912 kb on + strand, within ECD_03828
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 4,040,176 + ECD_03826 0.74 +1.2 4,040,176 + ECD_03826 0.74 +0.4 4,040,176 + ECD_03826 0.74 +0.7 4,040,177 - ECD_03826 0.74 +0.2 4,040,247 + ECD_03826 0.77 -0.2 4,040,248 - ECD_03826 0.77 +0.2 4,040,248 - ECD_03826 0.77 -0.4 4,040,248 - ECD_03826 0.77 -0.3 4,040,437 + ECD_03826 0.84 +0.5 4,040,437 + ECD_03826 0.84 +0.3 4,040,437 + ECD_03826 0.84 +0.2 4,040,459 + ECD_03826 0.85 +0.3 4,040,460 - ECD_03826 0.85 +0.6 4,040,460 - ECD_03826 0.85 -0.2 4,040,630 + -0.5 4,040,631 - +1.2 4,040,839 + +0.4 4,040,937 + +0.6 4,040,938 - +0.5 4,040,941 + -0.8 4,040,941 + -0.0 4,040,941 + -0.1 4,040,949 + +0.6 4,040,950 - +0.2 4,040,950 - -0.4 4,040,955 - -0.2 4,040,957 - -1.5 4,041,133 + +1.2 4,041,133 + +0.2 4,041,133 + +0.2 4,041,133 + +1.2 4,041,133 + -0.3 4,041,133 + -0.1 4,041,133 + -0.1 4,041,133 + +1.2 4,041,134 - +0.8 4,041,134 - -0.7 4,041,134 - +0.7 4,041,134 - -0.1 4,041,134 - +0.3 4,041,134 - +0.2 4,041,134 - +0.7 4,041,134 - +0.2 4,041,134 - +0.6 4,041,134 - -0.6 4,041,135 + -0.2 4,041,135 + +0.4 4,041,135 + +0.6 4,041,135 + -0.4 4,041,135 + +0.1 4,041,135 + +4.4 4,041,136 - +0.2 4,041,136 - -0.0 4,041,136 - -0.6 4,041,139 + +0.6 4,041,139 + -0.3 4,041,140 - +0.9 4,041,140 - +0.0 4,041,140 - +0.5 4,041,157 + +0.0 4,041,157 + +0.7 4,041,157 + +0.9 4,041,157 + +0.2 4,041,162 + -0.7 4,041,163 - -0.8 4,041,163 - -0.2 4,041,307 - ECD_03827 0.16 -0.1 4,041,307 - ECD_03827 0.16 -0.5 4,041,340 + ECD_03827 0.20 +0.1 4,041,340 + ECD_03827 0.20 -0.6 4,041,341 - ECD_03827 0.20 -0.5 4,041,341 - ECD_03827 0.20 +0.2 4,041,381 + ECD_03827 0.24 +0.1 4,041,384 + ECD_03827 0.25 -1.1 4,041,429 + ECD_03827 0.30 +0.2 4,041,429 + ECD_03827 0.30 -0.5 4,041,429 + ECD_03827 0.30 -0.2 4,041,429 + ECD_03827 0.30 +0.5 4,041,430 - ECD_03827 0.30 -0.6 4,041,430 - ECD_03827 0.30 -0.6 4,041,430 - ECD_03827 0.30 -0.2 4,041,492 + ECD_03827 0.37 -1.2 4,041,540 + ECD_03827 0.42 +0.0 4,041,553 + ECD_03827 0.44 +2.1 4,041,553 + ECD_03827 0.44 -1.0 4,041,578 + ECD_03827 0.47 +0.2 4,041,578 + ECD_03827 0.47 +0.3 4,041,807 + ECD_03827 0.72 +1.5 4,041,807 + ECD_03827 0.72 +0.9 4,041,852 + ECD_03827 0.77 -0.7 4,041,852 + ECD_03827 0.77 -0.5 4,041,927 + ECD_03827 0.86 +0.2 4,041,939 + ECD_03827 0.87 -0.5 4,041,940 - ECD_03827 0.87 -0.2 4,041,985 + -0.4 4,041,986 - +0.8 4,041,986 - +0.5 4,041,986 - -1.0 4,042,051 + +0.1 4,042,051 + -0.9 4,042,051 + -0.4 4,042,051 + -0.3 4,042,051 + -0.8 4,042,052 - -0.6 4,042,055 + +0.1 4,042,055 + -0.2 4,042,056 - +0.2 4,042,056 - -0.4 4,042,140 - -1.0 4,042,170 - +0.1 4,042,170 - -0.2 4,042,189 - +1.2 4,042,262 + +0.6 4,042,282 + -0.3 4,042,282 + +1.4 4,042,283 - -0.6 4,042,283 - +3.2 4,042,287 - +0.3 4,042,287 - +0.6 4,042,323 + -0.3 4,042,325 + -0.0 4,042,326 - -1.1 4,042,336 + -1.5 4,042,346 + +1.2 4,042,365 + +0.5 4,042,519 - +0.2 4,042,532 - +0.7 4,042,596 - -0.0 4,042,667 + ECD_03828 0.13 +0.5 4,042,791 + ECD_03828 0.19 -0.7 4,042,792 - ECD_03828 0.19 -0.2 4,042,792 - ECD_03828 0.19 +1.5 4,042,792 - ECD_03828 0.19 -0.2 4,042,792 - ECD_03828 0.19 -0.0 4,042,792 - ECD_03828 0.19 +0.7 4,042,792 - ECD_03828 0.19 +0.1 4,042,792 - ECD_03828 0.19 -0.8 4,042,838 + ECD_03828 0.21 -0.3 4,042,838 + ECD_03828 0.21 -0.1 4,042,839 - ECD_03828 0.21 -0.7 4,042,870 + ECD_03828 0.22 -0.2 4,042,912 + ECD_03828 0.24 +0.2 4,042,912 + ECD_03828 0.24 +0.1
Or see this region's nucleotide sequence