Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02957 and ECD_02958 are separated by 615 nucleotides ECD_02958 and ECD_02959 are separated by 4 nucleotides ECD_02959 and ECD_02960 are separated by 82 nucleotides
ECD_02957: ECD_02957 - putative membrane-bound redox modulator, at 3,104,662 to 3,105,627
_02957
ECD_02958: ECD_02958 - sodium:serine/threonine symporter, at 3,106,243 to 3,107,487
_02958
ECD_02959: ECD_02959 - Imp-YgjV family inner membrane protein, at 3,107,492 to 3,108,043
_02959
ECD_02960: ECD_02960 - altronate hydrolase, at 3,108,126 to 3,109,613
_02960
Position (kb)
3106
3107
3108 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3105.246 kb on + strand, within ECD_02957 at 3105.246 kb on + strand, within ECD_02957 at 3105.247 kb on - strand, within ECD_02957 at 3105.247 kb on - strand, within ECD_02957 at 3105.416 kb on - strand, within ECD_02957 at 3105.416 kb on - strand, within ECD_02957 at 3105.416 kb on - strand, within ECD_02957 at 3105.416 kb on - strand, within ECD_02957 at 3105.435 kb on - strand, within ECD_02957 at 3105.435 kb on - strand, within ECD_02957 at 3105.517 kb on + strand, within ECD_02957 at 3105.517 kb on + strand, within ECD_02957 at 3105.517 kb on + strand, within ECD_02957 at 3105.518 kb on - strand, within ECD_02957 at 3105.523 kb on - strand, within ECD_02957 at 3105.580 kb on - strand at 3105.635 kb on + strand at 3105.640 kb on + strand at 3105.640 kb on + strand at 3105.641 kb on - strand at 3105.641 kb on - strand at 3105.641 kb on - strand at 3105.685 kb on + strand at 3105.685 kb on + strand at 3105.690 kb on - strand at 3105.690 kb on - strand at 3105.693 kb on + strand at 3105.704 kb on + strand at 3105.704 kb on + strand at 3105.705 kb on - strand at 3105.957 kb on + strand at 3105.957 kb on + strand at 3105.958 kb on - strand at 3105.960 kb on - strand at 3105.967 kb on - strand at 3105.975 kb on - strand at 3106.017 kb on + strand at 3106.017 kb on + strand at 3106.018 kb on - strand at 3106.018 kb on - strand at 3106.018 kb on - strand at 3106.018 kb on - strand at 3106.018 kb on - strand at 3106.026 kb on + strand at 3106.039 kb on + strand at 3106.149 kb on + strand at 3106.151 kb on + strand at 3106.175 kb on + strand at 3106.175 kb on + strand at 3106.379 kb on + strand, within ECD_02958 at 3106.380 kb on - strand, within ECD_02958 at 3106.383 kb on + strand, within ECD_02958 at 3106.384 kb on - strand, within ECD_02958 at 3106.449 kb on + strand, within ECD_02958 at 3106.450 kb on - strand, within ECD_02958 at 3106.450 kb on - strand, within ECD_02958 at 3106.450 kb on - strand, within ECD_02958 at 3106.450 kb on - strand, within ECD_02958 at 3106.504 kb on + strand, within ECD_02958 at 3106.541 kb on + strand, within ECD_02958 at 3106.541 kb on + strand, within ECD_02958 at 3106.597 kb on - strand, within ECD_02958 at 3106.687 kb on + strand, within ECD_02958 at 3106.687 kb on + strand, within ECD_02958 at 3106.687 kb on + strand, within ECD_02958 at 3106.687 kb on + strand, within ECD_02958 at 3106.687 kb on + strand, within ECD_02958 at 3106.688 kb on - strand, within ECD_02958 at 3106.771 kb on - strand, within ECD_02958 at 3106.771 kb on - strand, within ECD_02958 at 3106.771 kb on - strand, within ECD_02958 at 3106.771 kb on - strand, within ECD_02958 at 3106.791 kb on + strand, within ECD_02958 at 3106.917 kb on + strand, within ECD_02958 at 3106.917 kb on + strand, within ECD_02958 at 3106.917 kb on + strand, within ECD_02958 at 3106.918 kb on - strand, within ECD_02958 at 3106.918 kb on - strand, within ECD_02958 at 3106.918 kb on - strand, within ECD_02958 at 3106.922 kb on + strand, within ECD_02958 at 3107.020 kb on + strand, within ECD_02958 at 3107.020 kb on + strand, within ECD_02958 at 3107.021 kb on - strand, within ECD_02958 at 3107.021 kb on - strand, within ECD_02958 at 3107.065 kb on - strand, within ECD_02958 at 3107.100 kb on + strand, within ECD_02958 at 3107.100 kb on + strand, within ECD_02958 at 3107.100 kb on + strand, within ECD_02958 at 3107.100 kb on + strand, within ECD_02958 at 3107.105 kb on - strand, within ECD_02958 at 3107.115 kb on + strand, within ECD_02958 at 3107.116 kb on - strand, within ECD_02958 at 3107.164 kb on - strand, within ECD_02958 at 3107.190 kb on + strand, within ECD_02958 at 3107.190 kb on + strand, within ECD_02958 at 3107.190 kb on + strand, within ECD_02958 at 3107.310 kb on + strand, within ECD_02958 at 3107.313 kb on + strand, within ECD_02958 at 3107.313 kb on + strand, within ECD_02958 at 3107.314 kb on - strand, within ECD_02958 at 3107.314 kb on - strand, within ECD_02958 at 3107.314 kb on - strand, within ECD_02958 at 3107.314 kb on - strand, within ECD_02958 at 3107.314 kb on - strand, within ECD_02958 at 3107.323 kb on - strand, within ECD_02958 at 3107.482 kb on - strand at 3107.482 kb on - strand at 3107.725 kb on + strand, within ECD_02959 at 3107.753 kb on + strand, within ECD_02959 at 3107.754 kb on - strand, within ECD_02959 at 3107.754 kb on - strand, within ECD_02959 at 3107.754 kb on - strand, within ECD_02959 at 3107.826 kb on - strand, within ECD_02959 at 3107.840 kb on + strand, within ECD_02959 at 3107.840 kb on + strand, within ECD_02959 at 3107.841 kb on - strand, within ECD_02959 at 3107.845 kb on + strand, within ECD_02959 at 3107.845 kb on + strand, within ECD_02959 at 3107.846 kb on - strand, within ECD_02959 at 3107.846 kb on - strand, within ECD_02959 at 3107.854 kb on + strand, within ECD_02959 at 3107.854 kb on + strand, within ECD_02959 at 3107.855 kb on - strand, within ECD_02959 at 3107.855 kb on - strand, within ECD_02959 at 3107.933 kb on - strand, within ECD_02959 at 3107.934 kb on + strand, within ECD_02959 at 3108.047 kb on - strand at 3108.055 kb on - strand at 3108.127 kb on + strand at 3108.129 kb on + strand at 3108.135 kb on + strand at 3108.390 kb on - strand, within ECD_02960 at 3108.390 kb on - strand, within ECD_02960 at 3108.447 kb on + strand, within ECD_02960 at 3108.447 kb on + strand, within ECD_02960 at 3108.448 kb on - strand, within ECD_02960 at 3108.448 kb on - strand, within ECD_02960
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 3,105,246 + ECD_02957 0.60 -1.5 3,105,246 + ECD_02957 0.60 +0.3 3,105,247 - ECD_02957 0.61 -0.5 3,105,247 - ECD_02957 0.61 -1.5 3,105,416 - ECD_02957 0.78 -0.5 3,105,416 - ECD_02957 0.78 -0.8 3,105,416 - ECD_02957 0.78 +2.2 3,105,416 - ECD_02957 0.78 -0.9 3,105,435 - ECD_02957 0.80 +0.2 3,105,435 - ECD_02957 0.80 -0.1 3,105,517 + ECD_02957 0.89 +3.9 3,105,517 + ECD_02957 0.89 +1.0 3,105,517 + ECD_02957 0.89 -0.6 3,105,518 - ECD_02957 0.89 -0.1 3,105,523 - ECD_02957 0.89 +0.1 3,105,580 - -1.1 3,105,635 + -1.1 3,105,640 + -2.7 3,105,640 + -0.7 3,105,641 - -0.9 3,105,641 - -1.3 3,105,641 - -1.0 3,105,685 + -0.9 3,105,685 + +0.6 3,105,690 - -0.4 3,105,690 - -1.2 3,105,693 + +0.3 3,105,704 + -1.0 3,105,704 + -0.9 3,105,705 - +0.1 3,105,957 + -0.0 3,105,957 + +0.1 3,105,958 - -1.0 3,105,960 - -0.4 3,105,967 - -0.0 3,105,975 - -0.5 3,106,017 + -1.1 3,106,017 + +1.0 3,106,018 - -0.2 3,106,018 - -0.9 3,106,018 - +4.4 3,106,018 - -0.2 3,106,018 - -0.4 3,106,026 + -0.3 3,106,039 + -0.8 3,106,149 + -0.9 3,106,151 + +3.5 3,106,175 + +3.8 3,106,175 + +2.8 3,106,379 + ECD_02958 0.11 -0.7 3,106,380 - ECD_02958 0.11 -1.0 3,106,383 + ECD_02958 0.11 -1.5 3,106,384 - ECD_02958 0.11 +0.5 3,106,449 + ECD_02958 0.17 -0.0 3,106,450 - ECD_02958 0.17 +0.1 3,106,450 - ECD_02958 0.17 -0.9 3,106,450 - ECD_02958 0.17 -0.7 3,106,450 - ECD_02958 0.17 +1.0 3,106,504 + ECD_02958 0.21 -0.1 3,106,541 + ECD_02958 0.24 -0.9 3,106,541 + ECD_02958 0.24 -1.5 3,106,597 - ECD_02958 0.28 -0.5 3,106,687 + ECD_02958 0.36 +0.1 3,106,687 + ECD_02958 0.36 +0.9 3,106,687 + ECD_02958 0.36 +2.1 3,106,687 + ECD_02958 0.36 -0.2 3,106,687 + ECD_02958 0.36 +3.1 3,106,688 - ECD_02958 0.36 +3.5 3,106,771 - ECD_02958 0.42 -0.8 3,106,771 - ECD_02958 0.42 -0.2 3,106,771 - ECD_02958 0.42 -1.4 3,106,771 - ECD_02958 0.42 -1.0 3,106,791 + ECD_02958 0.44 -0.9 3,106,917 + ECD_02958 0.54 +2.0 3,106,917 + ECD_02958 0.54 +0.2 3,106,917 + ECD_02958 0.54 -0.4 3,106,918 - ECD_02958 0.54 +4.4 3,106,918 - ECD_02958 0.54 -0.2 3,106,918 - ECD_02958 0.54 -1.2 3,106,922 + ECD_02958 0.55 -1.2 3,107,020 + ECD_02958 0.62 +0.2 3,107,020 + ECD_02958 0.62 +0.2 3,107,021 - ECD_02958 0.62 +0.9 3,107,021 - ECD_02958 0.62 +0.3 3,107,065 - ECD_02958 0.66 +0.3 3,107,100 + ECD_02958 0.69 -0.9 3,107,100 + ECD_02958 0.69 +1.6 3,107,100 + ECD_02958 0.69 +0.6 3,107,100 + ECD_02958 0.69 -0.8 3,107,105 - ECD_02958 0.69 -0.8 3,107,115 + ECD_02958 0.70 +0.7 3,107,116 - ECD_02958 0.70 +0.5 3,107,164 - ECD_02958 0.74 +2.2 3,107,190 + ECD_02958 0.76 -1.0 3,107,190 + ECD_02958 0.76 -0.4 3,107,190 + ECD_02958 0.76 +2.2 3,107,310 + ECD_02958 0.86 -0.7 3,107,313 + ECD_02958 0.86 +0.3 3,107,313 + ECD_02958 0.86 +0.1 3,107,314 - ECD_02958 0.86 +1.8 3,107,314 - ECD_02958 0.86 -2.7 3,107,314 - ECD_02958 0.86 -0.5 3,107,314 - ECD_02958 0.86 +0.1 3,107,314 - ECD_02958 0.86 +3.6 3,107,323 - ECD_02958 0.87 +2.2 3,107,482 - +0.2 3,107,482 - -0.4 3,107,725 + ECD_02959 0.42 -0.4 3,107,753 + ECD_02959 0.47 -0.4 3,107,754 - ECD_02959 0.47 -0.2 3,107,754 - ECD_02959 0.47 -0.5 3,107,754 - ECD_02959 0.47 +3.8 3,107,826 - ECD_02959 0.61 -0.4 3,107,840 + ECD_02959 0.63 -1.0 3,107,840 + ECD_02959 0.63 -1.8 3,107,841 - ECD_02959 0.63 +0.3 3,107,845 + ECD_02959 0.64 +2.2 3,107,845 + ECD_02959 0.64 +3.5 3,107,846 - ECD_02959 0.64 -1.5 3,107,846 - ECD_02959 0.64 +0.2 3,107,854 + ECD_02959 0.66 +1.1 3,107,854 + ECD_02959 0.66 +3.6 3,107,855 - ECD_02959 0.66 -0.7 3,107,855 - ECD_02959 0.66 +0.0 3,107,933 - ECD_02959 0.80 -1.5 3,107,934 + ECD_02959 0.80 +2.0 3,108,047 - +0.1 3,108,055 - -0.0 3,108,127 + -0.4 3,108,129 + -0.5 3,108,135 + +0.9 3,108,390 - ECD_02960 0.18 +3.2 3,108,390 - ECD_02960 0.18 -1.3 3,108,447 + ECD_02960 0.22 -0.9 3,108,447 + ECD_02960 0.22 +2.7 3,108,448 - ECD_02960 0.22 -1.0 3,108,448 - ECD_02960 0.22 -1.0
Or see this region's nucleotide sequence