Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03365 and ECD_03366 are separated by 210 nucleotides ECD_03366 and ECD_03367 are separated by 404 nucleotides
ECD_03365: ECD_03365 - glutamate decarboxylase A, PLP-dependent, at 3,527,367 to 3,528,767
_03365
ECD_03366: ECD_03366 - putative cytochrome C peroxidase, at 3,528,978 to 3,530,375
_03366
ECD_03367: ECD_03367 - cytoplasmic trehalase, at 3,530,780 to 3,532,429
_03367
Position (kb)
3528
3529
3530
3531 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3528.616 kb on + strand, within ECD_03365 at 3528.996 kb on - strand at 3528.997 kb on + strand at 3529.041 kb on - strand at 3529.082 kb on - strand at 3529.139 kb on - strand, within ECD_03366 at 3529.160 kb on + strand, within ECD_03366 at 3529.160 kb on + strand, within ECD_03366 at 3529.160 kb on + strand, within ECD_03366 at 3529.164 kb on + strand, within ECD_03366 at 3529.422 kb on - strand, within ECD_03366 at 3529.532 kb on + strand, within ECD_03366 at 3529.648 kb on - strand, within ECD_03366 at 3529.655 kb on + strand, within ECD_03366 at 3529.656 kb on - strand, within ECD_03366 at 3529.656 kb on - strand, within ECD_03366 at 3529.656 kb on - strand, within ECD_03366 at 3529.659 kb on + strand, within ECD_03366 at 3529.769 kb on + strand, within ECD_03366 at 3529.769 kb on + strand, within ECD_03366 at 3529.769 kb on + strand, within ECD_03366 at 3529.769 kb on + strand, within ECD_03366 at 3529.769 kb on + strand, within ECD_03366 at 3529.904 kb on - strand, within ECD_03366 at 3529.986 kb on - strand, within ECD_03366 at 3530.003 kb on + strand, within ECD_03366 at 3530.004 kb on - strand, within ECD_03366 at 3530.011 kb on + strand, within ECD_03366 at 3530.060 kb on + strand, within ECD_03366 at 3530.060 kb on + strand, within ECD_03366 at 3530.106 kb on - strand, within ECD_03366 at 3530.106 kb on - strand, within ECD_03366 at 3530.108 kb on - strand, within ECD_03366 at 3530.118 kb on - strand, within ECD_03366 at 3530.155 kb on + strand, within ECD_03366 at 3530.155 kb on + strand, within ECD_03366 at 3530.158 kb on + strand, within ECD_03366 at 3530.158 kb on + strand, within ECD_03366 at 3530.159 kb on - strand, within ECD_03366 at 3530.159 kb on - strand, within ECD_03366 at 3530.161 kb on + strand, within ECD_03366 at 3530.234 kb on + strand, within ECD_03366 at 3530.273 kb on + strand at 3530.283 kb on - strand at 3530.293 kb on + strand at 3530.302 kb on + strand at 3530.302 kb on + strand at 3530.316 kb on + strand at 3530.317 kb on - strand at 3530.317 kb on - strand at 3530.317 kb on - strand at 3530.358 kb on - strand at 3530.400 kb on + strand at 3530.400 kb on + strand at 3530.513 kb on - strand at 3530.523 kb on + strand at 3530.676 kb on + strand at 3530.780 kb on - strand at 3530.843 kb on + strand at 3530.843 kb on + strand at 3530.843 kb on + strand at 3530.859 kb on - strand at 3530.954 kb on + strand, within ECD_03367 at 3531.051 kb on + strand, within ECD_03367 at 3531.052 kb on - strand, within ECD_03367 at 3531.065 kb on - strand, within ECD_03367 at 3531.146 kb on + strand, within ECD_03367 at 3531.146 kb on + strand, within ECD_03367 at 3531.147 kb on - strand, within ECD_03367 at 3531.147 kb on - strand, within ECD_03367 at 3531.151 kb on - strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.263 kb on + strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.264 kb on - strand, within ECD_03367 at 3531.265 kb on + strand, within ECD_03367 at 3531.265 kb on + strand, within ECD_03367 at 3531.265 kb on + strand, within ECD_03367 at 3531.265 kb on + strand, within ECD_03367 at 3531.265 kb on + strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367 at 3531.266 kb on - strand, within ECD_03367
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 3,528,616 + ECD_03365 0.89 +0.1 3,528,996 - -0.0 3,528,997 + +0.3 3,529,041 - -0.9 3,529,082 - +1.0 3,529,139 - ECD_03366 0.12 -1.0 3,529,160 + ECD_03366 0.13 -0.1 3,529,160 + ECD_03366 0.13 -0.7 3,529,160 + ECD_03366 0.13 -1.7 3,529,164 + ECD_03366 0.13 -0.3 3,529,422 - ECD_03366 0.32 -0.3 3,529,532 + ECD_03366 0.40 +0.3 3,529,648 - ECD_03366 0.48 -1.2 3,529,655 + ECD_03366 0.48 -1.6 3,529,656 - ECD_03366 0.48 -0.0 3,529,656 - ECD_03366 0.48 +1.4 3,529,656 - ECD_03366 0.48 +0.7 3,529,659 + ECD_03366 0.49 -0.8 3,529,769 + ECD_03366 0.57 -0.3 3,529,769 + ECD_03366 0.57 -0.9 3,529,769 + ECD_03366 0.57 -0.1 3,529,769 + ECD_03366 0.57 +1.0 3,529,769 + ECD_03366 0.57 +0.3 3,529,904 - ECD_03366 0.66 -0.3 3,529,986 - ECD_03366 0.72 +0.1 3,530,003 + ECD_03366 0.73 +0.5 3,530,004 - ECD_03366 0.73 +0.1 3,530,011 + ECD_03366 0.74 +0.2 3,530,060 + ECD_03366 0.77 +0.3 3,530,060 + ECD_03366 0.77 -0.5 3,530,106 - ECD_03366 0.81 +0.3 3,530,106 - ECD_03366 0.81 -0.3 3,530,108 - ECD_03366 0.81 +0.9 3,530,118 - ECD_03366 0.82 -0.3 3,530,155 + ECD_03366 0.84 +0.2 3,530,155 + ECD_03366 0.84 -1.6 3,530,158 + ECD_03366 0.84 -1.3 3,530,158 + ECD_03366 0.84 -0.6 3,530,159 - ECD_03366 0.84 -0.4 3,530,159 - ECD_03366 0.84 +0.1 3,530,161 + ECD_03366 0.85 +0.8 3,530,234 + ECD_03366 0.90 -0.5 3,530,273 + -0.1 3,530,283 - -1.1 3,530,293 + +0.5 3,530,302 + -0.3 3,530,302 + +1.2 3,530,316 + +0.2 3,530,317 - -0.6 3,530,317 - +0.7 3,530,317 - +0.4 3,530,358 - -0.2 3,530,400 + -0.9 3,530,400 + -0.4 3,530,513 - +0.4 3,530,523 + +0.1 3,530,676 + -0.6 3,530,780 - +1.5 3,530,843 + +0.4 3,530,843 + -0.4 3,530,843 + +0.4 3,530,859 - -0.8 3,530,954 + ECD_03367 0.11 +1.0 3,531,051 + ECD_03367 0.16 +0.2 3,531,052 - ECD_03367 0.16 +0.6 3,531,065 - ECD_03367 0.17 +0.2 3,531,146 + ECD_03367 0.22 -0.6 3,531,146 + ECD_03367 0.22 +1.2 3,531,147 - ECD_03367 0.22 -1.5 3,531,147 - ECD_03367 0.22 -0.7 3,531,151 - ECD_03367 0.22 -1.7 3,531,263 + ECD_03367 0.29 +0.8 3,531,263 + ECD_03367 0.29 +0.2 3,531,263 + ECD_03367 0.29 +0.2 3,531,263 + ECD_03367 0.29 -0.3 3,531,263 + ECD_03367 0.29 +0.3 3,531,263 + ECD_03367 0.29 +0.1 3,531,263 + ECD_03367 0.29 +0.6 3,531,263 + ECD_03367 0.29 +0.3 3,531,263 + ECD_03367 0.29 +0.5 3,531,264 - ECD_03367 0.29 +0.1 3,531,264 - ECD_03367 0.29 -1.5 3,531,264 - ECD_03367 0.29 -0.1 3,531,264 - ECD_03367 0.29 +0.3 3,531,264 - ECD_03367 0.29 +0.4 3,531,264 - ECD_03367 0.29 +1.9 3,531,264 - ECD_03367 0.29 +0.1 3,531,265 + ECD_03367 0.29 -0.2 3,531,265 + ECD_03367 0.29 +0.2 3,531,265 + ECD_03367 0.29 +3.0 3,531,265 + ECD_03367 0.29 -0.0 3,531,265 + ECD_03367 0.29 +1.4 3,531,266 - ECD_03367 0.29 +0.9 3,531,266 - ECD_03367 0.29 -0.6 3,531,266 - ECD_03367 0.29 +0.7 3,531,266 - ECD_03367 0.29 +0.2 3,531,266 - ECD_03367 0.29 +1.1 3,531,266 - ECD_03367 0.29 +1.0
Or see this region's nucleotide sequence