Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_03303 and ECD_03304 are separated by 1 nucleotides ECD_03304 and ECD_03305 overlap by 4 nucleotides
ECD_03303: ECD_03303 - branched-chain amino acid ABC transporter ATPase, at 3,455,094 to 3,455,807
_03303
ECD_03304: ECD_03304 - branched-chain amino acid ABC transporter ATPase, at 3,455,809 to 3,456,576
_03304
ECD_03305: ECD_03305 - branched-chain amino acid ABC transporter permease, at 3,456,573 to 3,457,850
_03305
Position (kb)
3455
3456
3457 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3454.809 kb on + strand at 3454.809 kb on + strand at 3454.809 kb on + strand at 3454.812 kb on + strand at 3454.812 kb on + strand at 3454.812 kb on + strand at 3454.812 kb on + strand at 3454.812 kb on + strand at 3454.813 kb on - strand at 3454.813 kb on - strand at 3454.813 kb on - strand at 3454.912 kb on + strand at 3454.920 kb on - strand at 3454.988 kb on + strand at 3454.988 kb on + strand at 3455.092 kb on + strand at 3455.093 kb on - strand at 3455.095 kb on + strand at 3455.240 kb on + strand, within ECD_03303 at 3455.240 kb on + strand, within ECD_03303 at 3455.240 kb on + strand, within ECD_03303 at 3455.240 kb on + strand, within ECD_03303 at 3455.241 kb on - strand, within ECD_03303 at 3455.446 kb on + strand, within ECD_03303 at 3455.446 kb on + strand, within ECD_03303 at 3455.446 kb on + strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.447 kb on - strand, within ECD_03303 at 3455.457 kb on + strand, within ECD_03303 at 3455.609 kb on + strand, within ECD_03303 at 3455.655 kb on + strand, within ECD_03303 at 3455.656 kb on - strand, within ECD_03303 at 3455.660 kb on + strand, within ECD_03303 at 3455.810 kb on + strand at 3455.810 kb on + strand at 3455.811 kb on - strand at 3455.811 kb on - strand at 3455.821 kb on + strand at 3455.821 kb on + strand at 3455.821 kb on + strand at 3455.821 kb on + strand at 3455.825 kb on + strand at 3455.847 kb on + strand at 3455.903 kb on + strand, within ECD_03304 at 3455.904 kb on - strand, within ECD_03304 at 3455.938 kb on - strand, within ECD_03304 at 3456.110 kb on + strand, within ECD_03304 at 3456.110 kb on + strand, within ECD_03304 at 3456.120 kb on + strand, within ECD_03304 at 3456.121 kb on - strand, within ECD_03304 at 3456.413 kb on + strand, within ECD_03304 at 3456.491 kb on + strand, within ECD_03304 at 3456.559 kb on + strand at 3456.560 kb on - strand at 3456.560 kb on - strand at 3456.560 kb on - strand at 3456.562 kb on + strand at 3456.563 kb on - strand at 3456.563 kb on - strand at 3456.688 kb on - strand at 3456.698 kb on - strand at 3456.920 kb on + strand, within ECD_03305 at 3456.933 kb on + strand, within ECD_03305 at 3457.030 kb on - strand, within ECD_03305 at 3457.030 kb on - strand, within ECD_03305 at 3457.087 kb on + strand, within ECD_03305 at 3457.087 kb on + strand, within ECD_03305 at 3457.106 kb on + strand, within ECD_03305 at 3457.188 kb on - strand, within ECD_03305 at 3457.230 kb on + strand, within ECD_03305 at 3457.231 kb on - strand, within ECD_03305 at 3457.273 kb on + strand, within ECD_03305 at 3457.274 kb on - strand, within ECD_03305 at 3457.372 kb on + strand, within ECD_03305 at 3457.376 kb on - strand, within ECD_03305 at 3457.376 kb on - strand, within ECD_03305 at 3457.399 kb on + strand, within ECD_03305 at 3457.414 kb on + strand, within ECD_03305 at 3457.415 kb on - strand, within ECD_03305 at 3457.415 kb on - strand, within ECD_03305 at 3457.489 kb on + strand, within ECD_03305 at 3457.489 kb on + strand, within ECD_03305 at 3457.489 kb on + strand, within ECD_03305 at 3457.489 kb on + strand, within ECD_03305 at 3457.489 kb on + strand, within ECD_03305 at 3457.490 kb on - strand, within ECD_03305 at 3457.490 kb on - strand, within ECD_03305 at 3457.490 kb on - strand, within ECD_03305 at 3457.490 kb on - strand, within ECD_03305 at 3457.536 kb on - strand, within ECD_03305
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 3,454,809 + +0.7 3,454,809 + -0.6 3,454,809 + +0.9 3,454,812 + +0.2 3,454,812 + +0.9 3,454,812 + -0.3 3,454,812 + -1.8 3,454,812 + +0.0 3,454,813 - +0.2 3,454,813 - +1.0 3,454,813 - +0.4 3,454,912 + -0.1 3,454,920 - -0.3 3,454,988 + -0.6 3,454,988 + -0.8 3,455,092 + +2.2 3,455,093 - -0.1 3,455,095 + -0.6 3,455,240 + ECD_03303 0.20 +3.4 3,455,240 + ECD_03303 0.20 -0.1 3,455,240 + ECD_03303 0.20 -1.1 3,455,240 + ECD_03303 0.20 +4.6 3,455,241 - ECD_03303 0.21 -0.1 3,455,446 + ECD_03303 0.49 +0.3 3,455,446 + ECD_03303 0.49 -0.7 3,455,446 + ECD_03303 0.49 +0.7 3,455,447 - ECD_03303 0.49 +0.9 3,455,447 - ECD_03303 0.49 -0.5 3,455,447 - ECD_03303 0.49 +0.9 3,455,447 - ECD_03303 0.49 -0.9 3,455,447 - ECD_03303 0.49 +0.4 3,455,447 - ECD_03303 0.49 -0.1 3,455,447 - ECD_03303 0.49 -2.1 3,455,457 + ECD_03303 0.51 +0.6 3,455,609 + ECD_03303 0.72 +0.5 3,455,655 + ECD_03303 0.79 +3.2 3,455,656 - ECD_03303 0.79 -0.1 3,455,660 + ECD_03303 0.79 -0.3 3,455,810 + -0.4 3,455,810 + -0.3 3,455,811 - +1.4 3,455,811 - -0.1 3,455,821 + +0.6 3,455,821 + +0.2 3,455,821 + -0.5 3,455,821 + +1.0 3,455,825 + +0.2 3,455,847 + -1.7 3,455,903 + ECD_03304 0.12 +0.5 3,455,904 - ECD_03304 0.12 +1.0 3,455,938 - ECD_03304 0.17 -0.2 3,456,110 + ECD_03304 0.39 +0.4 3,456,110 + ECD_03304 0.39 -0.2 3,456,120 + ECD_03304 0.40 +0.2 3,456,121 - ECD_03304 0.41 +0.0 3,456,413 + ECD_03304 0.79 +1.7 3,456,491 + ECD_03304 0.89 -1.0 3,456,559 + -0.5 3,456,560 - +0.0 3,456,560 - -0.6 3,456,560 - -1.5 3,456,562 + -0.3 3,456,563 - -0.7 3,456,563 - +4.7 3,456,688 - -1.3 3,456,698 - +0.5 3,456,920 + ECD_03305 0.27 -0.7 3,456,933 + ECD_03305 0.28 -0.6 3,457,030 - ECD_03305 0.36 +0.4 3,457,030 - ECD_03305 0.36 +0.7 3,457,087 + ECD_03305 0.40 -0.6 3,457,087 + ECD_03305 0.40 -1.0 3,457,106 + ECD_03305 0.42 -0.7 3,457,188 - ECD_03305 0.48 +0.2 3,457,230 + ECD_03305 0.51 +1.0 3,457,231 - ECD_03305 0.51 +0.9 3,457,273 + ECD_03305 0.55 +0.9 3,457,274 - ECD_03305 0.55 +1.0 3,457,372 + ECD_03305 0.63 -1.1 3,457,376 - ECD_03305 0.63 -0.3 3,457,376 - ECD_03305 0.63 +0.3 3,457,399 + ECD_03305 0.65 +1.3 3,457,414 + ECD_03305 0.66 +0.5 3,457,415 - ECD_03305 0.66 +0.1 3,457,415 - ECD_03305 0.66 -1.5 3,457,489 + ECD_03305 0.72 -0.7 3,457,489 + ECD_03305 0.72 +0.0 3,457,489 + ECD_03305 0.72 -1.3 3,457,489 + ECD_03305 0.72 +1.0 3,457,489 + ECD_03305 0.72 +0.1 3,457,490 - ECD_03305 0.72 -1.1 3,457,490 - ECD_03305 0.72 +0.3 3,457,490 - ECD_03305 0.72 +0.1 3,457,490 - ECD_03305 0.72 -0.1 3,457,536 - ECD_03305 0.75 +0.3
Or see this region's nucleotide sequence