Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02892 and ECD_02893 are separated by 132 nucleotides ECD_02893 and ECD_02894 are separated by 1 nucleotides ECD_02894 and ECD_02895 are separated by 204 nucleotides
ECD_02892: ECD_02892 - putative ABC transporter permease, at 3,033,548 to 3,035,155
_02892
ECD_02893: ECD_02893 - antitoxin for MqsR toxin; transcriptional repressor, at 3,035,288 to 3,035,683
_02893
ECD_02894: ECD_02894 - GCU-specific mRNA interferase toxin of the MqsR-MqsA toxin-antitoxin system; biofilm/motility regulator; anti-repressor, at 3,035,685 to 3,035,981
_02894
ECD_02895: ECD_02895 - transcriptional repressor for mcbR biofilm gene, at 3,036,186 to 3,036,668
_02895
Position (kb)
3035
3036 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4
5 at 3034.301 kb on - strand, within ECD_02892 at 3034.307 kb on + strand, within ECD_02892 at 3034.395 kb on + strand, within ECD_02892 at 3034.412 kb on - strand, within ECD_02892 at 3034.416 kb on - strand, within ECD_02892 at 3034.416 kb on - strand, within ECD_02892 at 3034.443 kb on - strand, within ECD_02892 at 3034.447 kb on + strand, within ECD_02892 at 3034.448 kb on - strand, within ECD_02892 at 3034.448 kb on - strand, within ECD_02892 at 3034.448 kb on - strand, within ECD_02892 at 3034.448 kb on - strand, within ECD_02892 at 3034.448 kb on - strand, within ECD_02892 at 3034.486 kb on + strand, within ECD_02892 at 3034.498 kb on + strand, within ECD_02892 at 3034.502 kb on + strand, within ECD_02892 at 3034.533 kb on + strand, within ECD_02892 at 3034.534 kb on - strand, within ECD_02892 at 3034.552 kb on + strand, within ECD_02892 at 3034.553 kb on - strand, within ECD_02892 at 3034.573 kb on + strand, within ECD_02892 at 3034.655 kb on - strand, within ECD_02892 at 3034.666 kb on + strand, within ECD_02892 at 3034.700 kb on - strand, within ECD_02892 at 3034.700 kb on - strand, within ECD_02892 at 3034.723 kb on + strand, within ECD_02892 at 3034.723 kb on + strand, within ECD_02892 at 3034.723 kb on + strand, within ECD_02892 at 3034.723 kb on + strand, within ECD_02892 at 3034.724 kb on - strand, within ECD_02892 at 3034.724 kb on - strand, within ECD_02892 at 3034.877 kb on - strand, within ECD_02892 at 3035.046 kb on + strand at 3035.047 kb on - strand at 3035.117 kb on + strand at 3035.117 kb on + strand at 3035.149 kb on + strand at 3035.149 kb on + strand at 3035.151 kb on + strand at 3035.151 kb on + strand at 3035.151 kb on + strand at 3035.151 kb on + strand at 3035.151 kb on + strand at 3035.152 kb on - strand at 3035.152 kb on - strand at 3035.152 kb on - strand at 3035.152 kb on - strand at 3035.152 kb on - strand at 3035.177 kb on + strand at 3035.194 kb on + strand at 3035.397 kb on - strand, within ECD_02893 at 3035.397 kb on - strand, within ECD_02893 at 3035.397 kb on - strand, within ECD_02893 at 3035.397 kb on - strand, within ECD_02893 at 3035.463 kb on - strand, within ECD_02893 at 3035.514 kb on - strand, within ECD_02893 at 3035.514 kb on - strand, within ECD_02893 at 3035.514 kb on - strand, within ECD_02893 at 3035.514 kb on - strand, within ECD_02893 at 3035.786 kb on + strand, within ECD_02894 at 3035.787 kb on - strand, within ECD_02894 at 3035.789 kb on + strand, within ECD_02894 at 3035.790 kb on - strand, within ECD_02894 at 3035.790 kb on - strand, within ECD_02894 at 3035.790 kb on - strand, within ECD_02894 at 3035.801 kb on - strand, within ECD_02894 at 3035.801 kb on - strand, within ECD_02894 at 3035.817 kb on - strand, within ECD_02894 at 3035.852 kb on + strand, within ECD_02894 at 3035.853 kb on - strand, within ECD_02894 at 3035.858 kb on + strand, within ECD_02894 at 3035.859 kb on - strand, within ECD_02894 at 3035.903 kb on + strand, within ECD_02894 at 3035.903 kb on + strand, within ECD_02894 at 3035.960 kb on + strand at 3035.960 kb on + strand at 3035.960 kb on + strand at 3035.960 kb on + strand at 3035.960 kb on + strand at 3035.961 kb on - strand at 3035.961 kb on - strand at 3035.961 kb on - strand at 3036.047 kb on + strand at 3036.047 kb on + strand at 3036.066 kb on - strand at 3036.117 kb on + strand at 3036.117 kb on + strand at 3036.117 kb on + strand at 3036.117 kb on + strand at 3036.117 kb on + strand at 3036.117 kb on + strand at 3036.118 kb on - strand at 3036.118 kb on - strand at 3036.118 kb on - strand at 3036.118 kb on - strand at 3036.120 kb on - strand at 3036.121 kb on - strand at 3036.138 kb on + strand at 3036.164 kb on + strand at 3036.202 kb on + strand at 3036.202 kb on + strand at 3036.203 kb on - strand at 3036.203 kb on - strand at 3036.253 kb on + strand, within ECD_02895 at 3036.324 kb on + strand, within ECD_02895 at 3036.338 kb on + strand, within ECD_02895 at 3036.449 kb on + strand, within ECD_02895 at 3036.574 kb on + strand, within ECD_02895 at 3036.574 kb on + strand, within ECD_02895 at 3036.575 kb on - strand, within ECD_02895 at 3036.621 kb on + strand at 3036.622 kb on - strand at 3036.622 kb on - strand at 3036.646 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 3,034,301 - ECD_02892 0.47 -0.1 3,034,307 + ECD_02892 0.47 -0.7 3,034,395 + ECD_02892 0.53 +1.9 3,034,412 - ECD_02892 0.54 -0.7 3,034,416 - ECD_02892 0.54 -0.8 3,034,416 - ECD_02892 0.54 -0.4 3,034,443 - ECD_02892 0.56 +0.0 3,034,447 + ECD_02892 0.56 -1.2 3,034,448 - ECD_02892 0.56 -1.9 3,034,448 - ECD_02892 0.56 -0.5 3,034,448 - ECD_02892 0.56 +0.4 3,034,448 - ECD_02892 0.56 -0.9 3,034,448 - ECD_02892 0.56 +1.4 3,034,486 + ECD_02892 0.58 +3.4 3,034,498 + ECD_02892 0.59 -2.7 3,034,502 + ECD_02892 0.59 +4.8 3,034,533 + ECD_02892 0.61 +0.8 3,034,534 - ECD_02892 0.61 -1.7 3,034,552 + ECD_02892 0.62 +3.6 3,034,553 - ECD_02892 0.62 -0.3 3,034,573 + ECD_02892 0.64 +2.7 3,034,655 - ECD_02892 0.69 +1.9 3,034,666 + ECD_02892 0.70 -1.2 3,034,700 - ECD_02892 0.72 -1.2 3,034,700 - ECD_02892 0.72 +4.1 3,034,723 + ECD_02892 0.73 +2.2 3,034,723 + ECD_02892 0.73 -1.1 3,034,723 + ECD_02892 0.73 +0.0 3,034,723 + ECD_02892 0.73 -0.7 3,034,724 - ECD_02892 0.73 -1.3 3,034,724 - ECD_02892 0.73 +2.0 3,034,877 - ECD_02892 0.83 +4.1 3,035,046 + -2.1 3,035,047 - +2.9 3,035,117 + -1.6 3,035,117 + -2.8 3,035,149 + +0.1 3,035,149 + +3.9 3,035,151 + -0.8 3,035,151 + -0.5 3,035,151 + -1.2 3,035,151 + -1.4 3,035,151 + -0.3 3,035,152 - -2.0 3,035,152 - -3.6 3,035,152 - +0.3 3,035,152 - -1.1 3,035,152 - -0.5 3,035,177 + -0.8 3,035,194 + +0.1 3,035,397 - ECD_02893 0.28 -0.9 3,035,397 - ECD_02893 0.28 -0.6 3,035,397 - ECD_02893 0.28 -0.1 3,035,397 - ECD_02893 0.28 +1.7 3,035,463 - ECD_02893 0.44 -0.8 3,035,514 - ECD_02893 0.57 +4.0 3,035,514 - ECD_02893 0.57 +3.6 3,035,514 - ECD_02893 0.57 -2.4 3,035,514 - ECD_02893 0.57 +2.5 3,035,786 + ECD_02894 0.34 +1.2 3,035,787 - ECD_02894 0.34 -0.6 3,035,789 + ECD_02894 0.35 -3.7 3,035,790 - ECD_02894 0.35 -1.9 3,035,790 - ECD_02894 0.35 -1.7 3,035,790 - ECD_02894 0.35 -1.1 3,035,801 - ECD_02894 0.39 -1.5 3,035,801 - ECD_02894 0.39 -1.0 3,035,817 - ECD_02894 0.44 -0.1 3,035,852 + ECD_02894 0.56 -0.4 3,035,853 - ECD_02894 0.57 +1.8 3,035,858 + ECD_02894 0.58 -0.5 3,035,859 - ECD_02894 0.59 -0.5 3,035,903 + ECD_02894 0.73 -2.4 3,035,903 + ECD_02894 0.73 -1.5 3,035,960 + -2.2 3,035,960 + -1.2 3,035,960 + -1.1 3,035,960 + -0.6 3,035,960 + -0.4 3,035,961 - -1.7 3,035,961 - -2.9 3,035,961 - +2.0 3,036,047 + +3.7 3,036,047 + -1.4 3,036,066 - -1.7 3,036,117 + -1.8 3,036,117 + -1.6 3,036,117 + -4.0 3,036,117 + -0.6 3,036,117 + -1.3 3,036,117 + +1.2 3,036,118 - +2.6 3,036,118 - +3.0 3,036,118 - -0.3 3,036,118 - -1.7 3,036,120 - -0.5 3,036,121 - -0.7 3,036,138 + -0.6 3,036,164 + -1.6 3,036,202 + -0.6 3,036,202 + +4.9 3,036,203 - +0.5 3,036,203 - -0.7 3,036,253 + ECD_02895 0.14 +4.0 3,036,324 + ECD_02895 0.29 -1.4 3,036,338 + ECD_02895 0.31 +1.6 3,036,449 + ECD_02895 0.54 +4.5 3,036,574 + ECD_02895 0.80 -1.4 3,036,574 + ECD_02895 0.80 -0.1 3,036,575 - ECD_02895 0.81 -0.8 3,036,621 + -0.6 3,036,622 - -0.1 3,036,622 - +4.0 3,036,646 - -1.5
Or see this region's nucleotide sequence