Strain Fitness in Escherichia coli BL21 around ECD_02277

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02276 and ECD_02277 are separated by 107 nucleotidesECD_02277 and ECD_02278 overlap by 1 nucleotides ECD_02276: ECD_02276 - D-serine dehydratase, at 2,357,090 to 2,358,418 _02276 ECD_02277: ECD_02277 - putative multidrug efflux system, at 2,358,526 to 2,360,064 _02277 ECD_02278: ECD_02278 - multidrug resistance efflux pump membrane fusion protein, at 2,360,064 to 2,361,227 _02278 Position (kb) 2358 2359 2360 2361Strain fitness (log2 ratio) -2 -1 0 1at 2357.656 kb on + strand, within ECD_02276at 2357.656 kb on + strand, within ECD_02276at 2357.656 kb on + strand, within ECD_02276at 2357.761 kb on + strand, within ECD_02276at 2357.794 kb on + strand, within ECD_02276at 2358.022 kb on + strand, within ECD_02276at 2358.022 kb on + strand, within ECD_02276at 2358.023 kb on - strand, within ECD_02276at 2358.030 kb on + strand, within ECD_02276at 2358.040 kb on + strand, within ECD_02276at 2358.041 kb on - strand, within ECD_02276at 2358.048 kb on + strand, within ECD_02276at 2358.170 kb on + strand, within ECD_02276at 2358.194 kb on + strand, within ECD_02276at 2358.195 kb on - strand, within ECD_02276at 2358.229 kb on + strand, within ECD_02276at 2358.291 kb on + strandat 2358.291 kb on + strandat 2358.483 kb on + strandat 2358.483 kb on + strandat 2358.483 kb on + strandat 2358.508 kb on - strandat 2358.584 kb on - strandat 2358.773 kb on - strand, within ECD_02277at 2359.980 kb on + strandat 2360.146 kb on + strandat 2360.630 kb on + strand, within ECD_02278at 2360.822 kb on - strand, within ECD_02278

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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2,357,656 + ECD_02276 0.43 +1.4
2,357,656 + ECD_02276 0.43 +0.4
2,357,656 + ECD_02276 0.43 -0.9
2,357,761 + ECD_02276 0.50 +0.1
2,357,794 + ECD_02276 0.53 +0.6
2,358,022 + ECD_02276 0.70 -0.2
2,358,022 + ECD_02276 0.70 -0.7
2,358,023 - ECD_02276 0.70 +0.9
2,358,030 + ECD_02276 0.71 +1.3
2,358,040 + ECD_02276 0.71 +0.7
2,358,041 - ECD_02276 0.72 +0.3
2,358,048 + ECD_02276 0.72 -1.2
2,358,170 + ECD_02276 0.81 +0.3
2,358,194 + ECD_02276 0.83 +0.5
2,358,195 - ECD_02276 0.83 +0.8
2,358,229 + ECD_02276 0.86 -2.1
2,358,291 + +1.6
2,358,291 + +0.8
2,358,483 + -0.1
2,358,483 + +0.2
2,358,483 + +0.3
2,358,508 - -1.8
2,358,584 - -1.1
2,358,773 - ECD_02277 0.16 -0.2
2,359,980 + +0.3
2,360,146 + +1.0
2,360,630 + ECD_02278 0.49 +0.2
2,360,822 - ECD_02278 0.65 +1.4

Or see this region's nucleotide sequence