Strain Fitness in Escherichia coli BL21 around ECD_02212

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_02211 and ECD_02212 are separated by 93 nucleotidesECD_02212 and ECD_02213 are separated by 15 nucleotides ECD_02211: ECD_02211 - NADH:ubiquinone oxidoreductase, fused CD subunit, at 2,289,307 to 2,291,109 _02211 ECD_02212: ECD_02212 - NADH:ubiquinone oxidoreductase, chain B, at 2,291,203 to 2,291,865 _02212 ECD_02213: ECD_02213 - NADH:ubiquinone oxidoreductase, membrane subunit A, at 2,291,881 to 2,292,324 _02213 Position (kb) 2291 2292Strain fitness (log2 ratio) -1 0 1 2 3 4at 2290.250 kb on + strand, within ECD_02211at 2290.298 kb on + strand, within ECD_02211at 2290.298 kb on + strand, within ECD_02211at 2290.298 kb on + strand, within ECD_02211at 2290.299 kb on - strand, within ECD_02211at 2290.299 kb on - strand, within ECD_02211at 2290.307 kb on + strand, within ECD_02211at 2290.308 kb on - strand, within ECD_02211at 2290.669 kb on - strand, within ECD_02211at 2290.879 kb on + strand, within ECD_02211at 2291.097 kb on + strandat 2291.142 kb on - strandat 2291.162 kb on - strandat 2291.229 kb on + strandat 2291.230 kb on - strandat 2291.230 kb on - strandat 2291.373 kb on - strand, within ECD_02212at 2291.403 kb on + strand, within ECD_02212at 2291.405 kb on + strand, within ECD_02212at 2291.405 kb on + strand, within ECD_02212at 2291.406 kb on - strand, within ECD_02212at 2291.406 kb on - strand, within ECD_02212at 2291.406 kb on - strand, within ECD_02212at 2291.406 kb on - strand, within ECD_02212at 2291.455 kb on - strand, within ECD_02212at 2291.460 kb on - strand, within ECD_02212at 2291.460 kb on - strand, within ECD_02212at 2291.460 kb on - strand, within ECD_02212at 2291.460 kb on - strand, within ECD_02212at 2291.460 kb on - strand, within ECD_02212at 2291.463 kb on + strand, within ECD_02212at 2291.463 kb on + strand, within ECD_02212at 2291.525 kb on + strand, within ECD_02212at 2291.526 kb on - strand, within ECD_02212at 2291.526 kb on - strand, within ECD_02212at 2291.612 kb on - strand, within ECD_02212at 2291.695 kb on - strand, within ECD_02212at 2291.727 kb on + strand, within ECD_02212at 2291.856 kb on + strandat 2291.856 kb on + strandat 2291.856 kb on + strandat 2291.857 kb on - strandat 2291.857 kb on - strandat 2291.857 kb on - strandat 2291.858 kb on + strandat 2291.922 kb on + strandat 2291.979 kb on - strand, within ECD_02213at 2292.330 kb on - strandat 2292.330 kb on - strandat 2292.542 kb on + strandat 2292.584 kb on + strandat 2292.584 kb on + strandat 2292.585 kb on - strandat 2292.585 kb on - strandat 2292.851 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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2,290,250 + ECD_02211 0.52 +1.9
2,290,298 + ECD_02211 0.55 +1.0
2,290,298 + ECD_02211 0.55 +1.6
2,290,298 + ECD_02211 0.55 +2.0
2,290,299 - ECD_02211 0.55 +2.0
2,290,299 - ECD_02211 0.55 +2.5
2,290,307 + ECD_02211 0.55 +2.5
2,290,308 - ECD_02211 0.56 +1.7
2,290,669 - ECD_02211 0.76 +2.5
2,290,879 + ECD_02211 0.87 +2.9
2,291,097 + +2.7
2,291,142 - +1.9
2,291,162 - +1.2
2,291,229 + +1.9
2,291,230 - +1.7
2,291,230 - +1.9
2,291,373 - ECD_02212 0.26 +1.6
2,291,403 + ECD_02212 0.30 +0.9
2,291,405 + ECD_02212 0.30 +1.5
2,291,405 + ECD_02212 0.30 +2.0
2,291,406 - ECD_02212 0.31 -0.0
2,291,406 - ECD_02212 0.31 +2.1
2,291,406 - ECD_02212 0.31 +2.7
2,291,406 - ECD_02212 0.31 +1.7
2,291,455 - ECD_02212 0.38 +1.4
2,291,460 - ECD_02212 0.39 +1.8
2,291,460 - ECD_02212 0.39 +4.1
2,291,460 - ECD_02212 0.39 +1.7
2,291,460 - ECD_02212 0.39 +2.6
2,291,460 - ECD_02212 0.39 +2.0
2,291,463 + ECD_02212 0.39 +2.5
2,291,463 + ECD_02212 0.39 +1.8
2,291,525 + ECD_02212 0.49 -0.1
2,291,526 - ECD_02212 0.49 +2.0
2,291,526 - ECD_02212 0.49 +2.2
2,291,612 - ECD_02212 0.62 +3.4
2,291,695 - ECD_02212 0.74 +1.2
2,291,727 + ECD_02212 0.79 +1.8
2,291,856 + +2.0
2,291,856 + +1.2
2,291,856 + +2.0
2,291,857 - +3.0
2,291,857 - +1.6
2,291,857 - +1.3
2,291,858 + +1.7
2,291,922 + +2.2
2,291,979 - ECD_02213 0.22 +2.8
2,292,330 - +2.0
2,292,330 - +0.9
2,292,542 + +0.9
2,292,584 + +1.5
2,292,584 + +1.0
2,292,585 - +0.2
2,292,585 - -0.2
2,292,851 - -0.8

Or see this region's nucleotide sequence