Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02184 and ECD_02185 overlap by 1 nucleotides ECD_02185 and ECD_02186 overlap by 7 nucleotides ECD_02186 and ECD_02187 are separated by 109 nucleotides ECD_02187 and ECD_02188 overlap by 4 nucleotides ECD_02188 and ECD_02189 overlap by 1 nucleotides
ECD_02184: ECD_02184 - undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit, at 2,262,731 to 2,263,066
_02184
ECD_02185: ECD_02185 - undecaprenyl phosphate-alpha-L-ara4N exporter; flippase ArnEF subunit, at 2,263,066 to 2,263,452
_02185
ECD_02186: ECD_02186 - inactive two-component system connector protein, at 2,263,446 to 2,263,712
_02186
ECD_02187: ECD_02187 - O-succinylbenzoate-CoA ligase, at 2,263,822 to 2,265,177
_02187
ECD_02188: ECD_02188 - O-succinylbenzoyl-CoA synthase, at 2,265,174 to 2,266,136
_02188
ECD_02189: ECD_02189 - dihydroxynaphthoic acid synthetase, at 2,266,136 to 2,266,993
_02189
Position (kb)
2263
2264
2265
2266 Strain fitness (log2 ratio)
-2
-1
0
1 at 2263.499 kb on - strand, within ECD_02186 at 2263.548 kb on - strand, within ECD_02186 at 2263.656 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.660 kb on - strand, within ECD_02186 at 2263.719 kb on - strand at 2263.758 kb on - strand at 2263.764 kb on + strand at 2263.979 kb on + strand, within ECD_02187 at 2263.980 kb on - strand, within ECD_02187 at 2264.117 kb on - strand, within ECD_02187 at 2264.524 kb on - strand, within ECD_02187 at 2264.586 kb on - strand, within ECD_02187 at 2264.711 kb on + strand, within ECD_02187 at 2264.715 kb on + strand, within ECD_02187 at 2264.715 kb on + strand, within ECD_02187 at 2264.716 kb on - strand, within ECD_02187 at 2264.716 kb on - strand, within ECD_02187 at 2265.116 kb on - strand at 2265.330 kb on + strand, within ECD_02188 at 2265.442 kb on - strand, within ECD_02188 at 2265.608 kb on - strand, within ECD_02188 at 2265.728 kb on - strand, within ECD_02188 at 2265.768 kb on - strand, within ECD_02188 at 2265.848 kb on + strand, within ECD_02188 at 2265.849 kb on - strand, within ECD_02188 at 2265.849 kb on - strand, within ECD_02188 at 2265.932 kb on + strand, within ECD_02188 at 2265.933 kb on - strand, within ECD_02188 at 2266.046 kb on - strand at 2266.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 2,263,499 - ECD_02186 0.20 +0.2 2,263,548 - ECD_02186 0.38 -0.1 2,263,656 - ECD_02186 0.79 -0.5 2,263,660 - ECD_02186 0.80 +0.0 2,263,660 - ECD_02186 0.80 +0.5 2,263,660 - ECD_02186 0.80 +0.6 2,263,660 - ECD_02186 0.80 +0.5 2,263,660 - ECD_02186 0.80 -0.5 2,263,660 - ECD_02186 0.80 -1.8 2,263,660 - ECD_02186 0.80 -0.5 2,263,719 - -1.0 2,263,758 - -2.1 2,263,764 + +0.0 2,263,979 + ECD_02187 0.12 -1.4 2,263,980 - ECD_02187 0.12 -0.8 2,264,117 - ECD_02187 0.22 +1.4 2,264,524 - ECD_02187 0.52 -0.2 2,264,586 - ECD_02187 0.56 -1.4 2,264,711 + ECD_02187 0.66 +0.2 2,264,715 + ECD_02187 0.66 -0.2 2,264,715 + ECD_02187 0.66 -1.5 2,264,716 - ECD_02187 0.66 +0.0 2,264,716 - ECD_02187 0.66 -1.5 2,265,116 - -0.1 2,265,330 + ECD_02188 0.16 +0.2 2,265,442 - ECD_02188 0.28 -1.9 2,265,608 - ECD_02188 0.45 +0.0 2,265,728 - ECD_02188 0.58 +0.5 2,265,768 - ECD_02188 0.62 -1.0 2,265,848 + ECD_02188 0.70 -0.9 2,265,849 - ECD_02188 0.70 -1.8 2,265,849 - ECD_02188 0.70 +0.3 2,265,932 + ECD_02188 0.79 -0.1 2,265,933 - ECD_02188 0.79 -0.5 2,266,046 - +0.8 2,266,046 - -1.4
Or see this region's nucleotide sequence