Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01749 and ECD_01750 are separated by 47 nucleotides ECD_01750 and ECD_01751 are separated by 89 nucleotides ECD_01751 and ECD_01752 are separated by 561 nucleotides
ECD_01749: ECD_01749 - D-hexose-6-phosphate epimerase-like protein, at 1,808,227 to 1,809,111
_01749
ECD_01750: ECD_01750 - aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent, at 1,809,159 to 1,810,013
_01750
ECD_01751: ECD_01751 - scaffolding protein for murein synthesizing machinery, at 1,810,103 to 1,810,849
_01751
ECD_01752: ECD_01752 - protein kinase, endogenous substrate unidentified; autokinase, at 1,811,411 to 1,813,219
_01752
Position (kb)
1810
1811 Strain fitness (log2 ratio)
-1
0
1
2 at 1809.337 kb on - strand, within ECD_01750 at 1809.947 kb on - strand at 1810.285 kb on - strand, within ECD_01751 at 1810.333 kb on - strand, within ECD_01751 at 1810.336 kb on - strand, within ECD_01751 at 1810.507 kb on - strand, within ECD_01751 at 1810.535 kb on - strand, within ECD_01751 at 1810.535 kb on - strand, within ECD_01751 at 1810.645 kb on - strand, within ECD_01751 at 1810.690 kb on - strand, within ECD_01751 at 1810.735 kb on - strand, within ECD_01751 at 1810.755 kb on - strand, within ECD_01751 at 1810.944 kb on + strand at 1811.112 kb on - strand at 1811.131 kb on + strand at 1811.238 kb on + strand at 1811.707 kb on + strand, within ECD_01752
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 1,809,337 - ECD_01750 0.21 -0.7 1,809,947 - -0.9 1,810,285 - ECD_01751 0.24 -1.3 1,810,333 - ECD_01751 0.31 -0.4 1,810,336 - ECD_01751 0.31 -0.3 1,810,507 - ECD_01751 0.54 +0.0 1,810,535 - ECD_01751 0.58 +0.1 1,810,535 - ECD_01751 0.58 -0.3 1,810,645 - ECD_01751 0.73 +0.9 1,810,690 - ECD_01751 0.79 +0.4 1,810,735 - ECD_01751 0.85 +0.1 1,810,755 - ECD_01751 0.87 -1.3 1,810,944 + +0.8 1,811,112 - +0.7 1,811,131 + +0.1 1,811,238 + -0.3 1,811,707 + ECD_01752 0.16 +1.9
Or see this region's nucleotide sequence