Strain Fitness in Escherichia coli BL21 around ECD_01751

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01749 and ECD_01750 are separated by 47 nucleotidesECD_01750 and ECD_01751 are separated by 89 nucleotidesECD_01751 and ECD_01752 are separated by 561 nucleotides ECD_01749: ECD_01749 - D-hexose-6-phosphate epimerase-like protein, at 1,808,227 to 1,809,111 _01749 ECD_01750: ECD_01750 - aldo-keto reductase, methylglyoxal to acetol, NADPH-dependent, at 1,809,159 to 1,810,013 _01750 ECD_01751: ECD_01751 - scaffolding protein for murein synthesizing machinery, at 1,810,103 to 1,810,849 _01751 ECD_01752: ECD_01752 - protein kinase, endogenous substrate unidentified; autokinase, at 1,811,411 to 1,813,219 _01752 Position (kb) 1810 1811Strain fitness (log2 ratio) -1 0 1 2at 1809.337 kb on - strand, within ECD_01750at 1809.947 kb on - strandat 1810.285 kb on - strand, within ECD_01751at 1810.333 kb on - strand, within ECD_01751at 1810.336 kb on - strand, within ECD_01751at 1810.507 kb on - strand, within ECD_01751at 1810.535 kb on - strand, within ECD_01751at 1810.535 kb on - strand, within ECD_01751at 1810.645 kb on - strand, within ECD_01751at 1810.690 kb on - strand, within ECD_01751at 1810.735 kb on - strand, within ECD_01751at 1810.755 kb on - strand, within ECD_01751at 1810.944 kb on + strandat 1811.112 kb on - strandat 1811.131 kb on + strandat 1811.238 kb on + strandat 1811.707 kb on + strand, within ECD_01752

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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1,809,337 - ECD_01750 0.21 -0.7
1,809,947 - -0.9
1,810,285 - ECD_01751 0.24 -1.3
1,810,333 - ECD_01751 0.31 -0.4
1,810,336 - ECD_01751 0.31 -0.3
1,810,507 - ECD_01751 0.54 +0.0
1,810,535 - ECD_01751 0.58 +0.1
1,810,535 - ECD_01751 0.58 -0.3
1,810,645 - ECD_01751 0.73 +0.9
1,810,690 - ECD_01751 0.79 +0.4
1,810,735 - ECD_01751 0.85 +0.1
1,810,755 - ECD_01751 0.87 -1.3
1,810,944 + +0.8
1,811,112 - +0.7
1,811,131 + +0.1
1,811,238 + -0.3
1,811,707 + ECD_01752 0.16 +1.9

Or see this region's nucleotide sequence