Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01381 and ECD_01382 overlap by 80 nucleotides ECD_01382 and ECD_01383 are separated by 15 nucleotides ECD_01383 and ECD_01384 are separated by 62 nucleotides ECD_01384 and ECD_01385 overlap by 9 nucleotides
ECD_01381: ECD_01381 - OPG biosynthetic periplasmic protein, at 1,450,948 to 1,452,573
_01381
ECD_01382: ECD_01382 - hypothetical protein, at 1,452,494 to 1,452,697
_01382
ECD_01383: ECD_01383 - DUF465 family protein, at 1,452,713 to 1,452,937
_01383
ECD_01384: ECD_01384 - ribosomal-protein-L7/L12-serine acetyltransferase, at 1,453,000 to 1,453,539
_01384
ECD_01385: ECD_01385 - uncharacterized protein, at 1,453,531 to 1,454,511
_01385
Position (kb)
1452
1453 Strain fitness (log2 ratio)
-1
0
1 at 1451.527 kb on + strand, within ECD_01381 at 1451.528 kb on - strand, within ECD_01381 at 1451.599 kb on - strand, within ECD_01381 at 1451.707 kb on + strand, within ECD_01381 at 1451.707 kb on + strand, within ECD_01381 at 1451.973 kb on + strand, within ECD_01381 at 1452.388 kb on - strand, within ECD_01381 at 1452.469 kb on + strand at 1452.469 kb on + strand at 1452.469 kb on + strand at 1452.470 kb on - strand at 1452.517 kb on + strand at 1452.547 kb on + strand at 1452.572 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 1,451,527 + ECD_01381 0.36 +1.0 1,451,528 - ECD_01381 0.36 +1.1 1,451,599 - ECD_01381 0.40 +0.7 1,451,707 + ECD_01381 0.47 -1.3 1,451,707 + ECD_01381 0.47 +1.6 1,451,973 + ECD_01381 0.63 +0.5 1,452,388 - ECD_01381 0.89 +1.2 1,452,469 + +1.7 1,452,469 + +1.6 1,452,469 + +1.4 1,452,470 - +1.3 1,452,517 + +1.0 1,452,547 + +0.5 1,452,572 - +1.3
Or see this region's nucleotide sequence