Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01041 and ECD_01042 are separated by 94 nucleotides ECD_01042 and ECD_01043 are separated by 1 nucleotides ECD_01043 and ECD_01044 are separated by 7 nucleotides
ECD_01041: ECD_01041 - uncharacterized protein, at 1,107,981 to 1,108,292
_01041
ECD_01042: ECD_01042 - O-acetyl-ADP-ribose deacetylase; RNase III inhibitor during cold shock; putative cardiolipin synthase C regulatory subunit, at 1,108,387 to 1,108,920
_01042
ECD_01043: ECD_01043 - stationary phase cardiolipin synthase 3, at 1,108,922 to 1,110,343
_01043
ECD_01044: ECD_01044 - OPG biosynthetic transmembrane succinyltransferase, at 1,110,351 to 1,111,508
_01044
Position (kb) 1108
1109
1110
1111 Strain fitness (log2 ratio) -1
0
1
2
3 at 1107.931 kb on - strand at 1108.160 kb on + strand, within ECD_01041 at 1108.287 kb on - strand at 1108.419 kb on + strand at 1108.422 kb on + strand at 1108.587 kb on + strand, within ECD_01042 at 1108.588 kb on - strand, within ECD_01042 at 1108.724 kb on - strand, within ECD_01042 at 1109.069 kb on + strand, within ECD_01043 at 1109.069 kb on + strand, within ECD_01043 at 1109.070 kb on - strand, within ECD_01043 at 1109.070 kb on - strand, within ECD_01043 at 1109.086 kb on + strand, within ECD_01043 at 1109.274 kb on - strand, within ECD_01043 at 1109.275 kb on + strand, within ECD_01043 at 1109.276 kb on - strand, within ECD_01043 at 1109.783 kb on + strand, within ECD_01043 at 1110.180 kb on - strand, within ECD_01043 at 1110.465 kb on + strand at 1110.524 kb on - strand, within ECD_01044 at 1110.563 kb on - strand, within ECD_01044 at 1110.733 kb on - strand, within ECD_01044
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 1,107,931 - +0.8 1,108,160 + ECD_01041 0.57 +0.2 1,108,287 - +0.9 1,108,419 + +0.0 1,108,422 + -1.0 1,108,587 + ECD_01042 0.37 -0.2 1,108,588 - ECD_01042 0.38 +0.4 1,108,724 - ECD_01042 0.63 -0.9 1,109,069 + ECD_01043 0.10 +0.8 1,109,069 + ECD_01043 0.10 +2.0 1,109,070 - ECD_01043 0.10 +1.4 1,109,070 - ECD_01043 0.10 +3.1 1,109,086 + ECD_01043 0.12 +0.9 1,109,274 - ECD_01043 0.25 +1.0 1,109,275 + ECD_01043 0.25 -0.3 1,109,276 - ECD_01043 0.25 -0.6 1,109,783 + ECD_01043 0.61 -0.2 1,110,180 - ECD_01043 0.88 +0.4 1,110,465 + +0.1 1,110,524 - ECD_01044 0.15 +1.4 1,110,563 - ECD_01044 0.18 +1.1 1,110,733 - ECD_01044 0.33 +0.7
Or see this region's nucleotide sequence