Experiment: Bas51
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_01011 and ECD_01012 are separated by 9 nucleotides ECD_01012 and ECD_01013 are separated by 7 nucleotides ECD_01013 and ECD_01014 are separated by 11 nucleotides ECD_01014 and ECD_01015 overlap by 1 nucleotides
ECD_01011: ECD_01011 - putative malonic semialdehyde reductase, at 1,074,647 to 1,075,237
_01011
ECD_01012: ECD_01012 - putative reactive intermediate detoxifying aminoacrylate hydrolase, at 1,075,247 to 1,076,047
_01012
ECD_01013: ECD_01013 - putative aminoacrylate deaminase, reactive intermediate detoxification; weak enamine/imine deaminase activity, at 1,076,055 to 1,076,441
_01013
ECD_01014: ECD_01014 - ureidoacrylate amidohydrolase, at 1,076,453 to 1,077,145
_01014
ECD_01015: ECD_01015 - pyrimidine oxygenase, FMN-dependent, at 1,077,145 to 1,078,293
_01015
Position (kb) 1076
1077 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1075.129 kb on - strand, within ECD_01011 at 1075.271 kb on + strand at 1075.272 kb on - strand at 1075.477 kb on + strand, within ECD_01012 at 1075.501 kb on + strand, within ECD_01012 at 1075.867 kb on - strand, within ECD_01012 at 1075.892 kb on - strand, within ECD_01012 at 1076.204 kb on + strand, within ECD_01013 at 1076.324 kb on + strand, within ECD_01013 at 1076.325 kb on - strand, within ECD_01013 at 1076.356 kb on + strand, within ECD_01013 at 1076.356 kb on + strand, within ECD_01013 at 1076.356 kb on + strand, within ECD_01013 at 1076.357 kb on - strand, within ECD_01013 at 1076.357 kb on - strand, within ECD_01013 at 1076.848 kb on + strand, within ECD_01014 at 1076.913 kb on + strand, within ECD_01014 at 1076.914 kb on - strand, within ECD_01014 at 1077.038 kb on + strand, within ECD_01014 at 1077.060 kb on + strand, within ECD_01014
Per-strain Table
Position Strand Gene LocusTag Fraction Bas51 remove 1,075,129 - ECD_01011 0.82 -1.6 1,075,271 + -0.3 1,075,272 - -1.9 1,075,477 + ECD_01012 0.29 +2.1 1,075,501 + ECD_01012 0.32 -0.6 1,075,867 - ECD_01012 0.77 -1.9 1,075,892 - ECD_01012 0.81 +1.4 1,076,204 + ECD_01013 0.39 +1.6 1,076,324 + ECD_01013 0.70 +1.0 1,076,325 - ECD_01013 0.70 +0.1 1,076,356 + ECD_01013 0.78 -1.6 1,076,356 + ECD_01013 0.78 +0.4 1,076,356 + ECD_01013 0.78 -0.8 1,076,357 - ECD_01013 0.78 +0.4 1,076,357 - ECD_01013 0.78 +2.8 1,076,848 + ECD_01014 0.57 +0.4 1,076,913 + ECD_01014 0.66 -0.0 1,076,914 - ECD_01014 0.67 +0.1 1,077,038 + ECD_01014 0.84 -1.2 1,077,060 + ECD_01014 0.88 -0.3
Or see this region's nucleotide sequence