Strain Fitness in Escherichia coli BL21 around ECD_00458

Experiment: Bas51

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00457 and ECD_00458 are separated by 12 nucleotidesECD_00458 and ECD_00459 are separated by 99 nucleotides ECD_00457: ECD_00457 - glyoxylate carboligase, at 503,061 to 504,842 _00457 ECD_00458: ECD_00458 - hydroxypyruvate isomerase, at 504,855 to 505,631 _00458 ECD_00459: ECD_00459 - tartronate semialdehyde reductase, NADH-dependent, at 505,731 to 506,609 _00459 Position (kb) 504 505 506Strain fitness (log2 ratio) -1 0 1at 503.960 kb on + strand, within ECD_00457at 503.960 kb on + strand, within ECD_00457at 503.961 kb on - strand, within ECD_00457at 504.027 kb on - strand, within ECD_00457at 504.186 kb on + strand, within ECD_00457at 504.457 kb on - strand, within ECD_00457at 504.483 kb on + strand, within ECD_00457at 504.614 kb on - strand, within ECD_00457at 504.620 kb on + strand, within ECD_00457at 504.720 kb on - strandat 505.807 kb on + strandat 505.807 kb on + strandat 506.004 kb on - strand, within ECD_00459at 506.129 kb on + strand, within ECD_00459at 506.165 kb on + strand, within ECD_00459at 506.166 kb on - strand, within ECD_00459at 506.515 kb on + strand, within ECD_00459

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Per-strain Table

Position Strand Gene LocusTag Fraction Bas51
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503,960 + ECD_00457 0.50 -1.0
503,960 + ECD_00457 0.50 -0.2
503,961 - ECD_00457 0.51 +0.4
504,027 - ECD_00457 0.54 -0.7
504,186 + ECD_00457 0.63 +0.2
504,457 - ECD_00457 0.78 +0.0
504,483 + ECD_00457 0.80 +0.6
504,614 - ECD_00457 0.87 -0.1
504,620 + ECD_00457 0.87 +0.2
504,720 - +0.5
505,807 + -0.6
505,807 + -0.3
506,004 - ECD_00459 0.31 +0.2
506,129 + ECD_00459 0.45 -1.3
506,165 + ECD_00459 0.49 -0.9
506,166 - ECD_00459 0.49 +0.1
506,515 + ECD_00459 0.89 -0.5

Or see this region's nucleotide sequence