Strain Fitness in Bosea sp. OAE506 around ABIE41_RS04690

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS04685 and ABIE41_RS04690 are separated by 39 nucleotidesABIE41_RS04690 and ABIE41_RS04695 overlap by 4 nucleotidesABIE41_RS04695 and ABIE41_RS04700 are separated by 31 nucleotides ABIE41_RS04685: ABIE41_RS04685 - tRNA uridine-5-carboxymethylaminomethyl(34) synthesis enzyme MnmG, at 975,216 to 977,099 _RS04685 ABIE41_RS04690: ABIE41_RS04690 - 16S rRNA (guanine(527)-N(7))-methyltransferase RsmG, at 977,139 to 977,786 _RS04690 ABIE41_RS04695: ABIE41_RS04695 - ParA family protein, at 977,783 to 978,613 _RS04695 ABIE41_RS04700: ABIE41_RS04700 - ParB/RepB/Spo0J family partition protein, at 978,645 to 979,523 _RS04700 Position (kb) 977 978Strain fitness (log2 ratio) -2 -1 0 1at 976.740 kb on + strand, within ABIE41_RS04685at 977.662 kb on + strand, within ABIE41_RS04690at 977.662 kb on + strand, within ABIE41_RS04690

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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976,740 + ABIE41_RS04685 0.81 +1.2
977,662 + ABIE41_RS04690 0.81 -2.5
977,662 + ABIE41_RS04690 0.81 -0.1

Or see this region's nucleotide sequence