Strain Fitness in Bosea sp. OAE506 around ABIE41_RS02365

Experiment: R2A no stress control

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntABIE41_RS02355 and ABIE41_RS02360 are separated by 9 nucleotidesABIE41_RS02360 and ABIE41_RS02365 overlap by 4 nucleotidesABIE41_RS02365 and ABIE41_RS02370 overlap by 4 nucleotides ABIE41_RS02355: ABIE41_RS02355 - Lrp/AsnC family transcriptional regulator, at 469,659 to 470,114 _RS02355 ABIE41_RS02360: ABIE41_RS02360 - ABC transporter permease, at 470,124 to 470,939 _RS02360 ABIE41_RS02365: ABIE41_RS02365 - ABC transporter permease, at 470,936 to 471,841 _RS02365 ABIE41_RS02370: ABIE41_RS02370 - ABC transporter ATP-binding protein, at 471,838 to 472,929 _RS02370 Position (kb) 470 471 472Strain fitness (log2 ratio) -2 -1 0 1 2 3 4at 470.278 kb on + strand, within ABIE41_RS02360at 470.491 kb on + strand, within ABIE41_RS02360at 470.491 kb on + strand, within ABIE41_RS02360at 470.491 kb on + strand, within ABIE41_RS02360at 470.492 kb on - strand, within ABIE41_RS02360at 470.492 kb on - strand, within ABIE41_RS02360at 470.492 kb on - strand, within ABIE41_RS02360at 470.592 kb on - strand, within ABIE41_RS02360at 470.592 kb on - strand, within ABIE41_RS02360at 470.592 kb on - strand, within ABIE41_RS02360at 470.592 kb on - strand, within ABIE41_RS02360at 470.764 kb on + strand, within ABIE41_RS02360at 470.764 kb on + strand, within ABIE41_RS02360at 470.765 kb on - strand, within ABIE41_RS02360at 470.765 kb on - strand, within ABIE41_RS02360at 470.765 kb on - strand, within ABIE41_RS02360at 470.765 kb on - strand, within ABIE41_RS02360at 470.801 kb on + strand, within ABIE41_RS02360at 470.801 kb on + strand, within ABIE41_RS02360at 470.801 kb on + strand, within ABIE41_RS02360at 470.802 kb on - strand, within ABIE41_RS02360at 470.803 kb on + strand, within ABIE41_RS02360at 470.803 kb on + strand, within ABIE41_RS02360at 470.803 kb on + strand, within ABIE41_RS02360at 470.803 kb on + strand, within ABIE41_RS02360at 470.804 kb on - strand, within ABIE41_RS02360at 471.064 kb on - strand, within ABIE41_RS02365at 471.078 kb on + strand, within ABIE41_RS02365at 471.078 kb on + strand, within ABIE41_RS02365at 471.102 kb on + strand, within ABIE41_RS02365at 471.102 kb on + strand, within ABIE41_RS02365at 471.103 kb on - strand, within ABIE41_RS02365at 471.103 kb on - strand, within ABIE41_RS02365at 471.103 kb on - strand, within ABIE41_RS02365at 471.103 kb on - strand, within ABIE41_RS02365at 471.103 kb on - strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.144 kb on + strand, within ABIE41_RS02365at 471.145 kb on - strand, within ABIE41_RS02365at 471.145 kb on - strand, within ABIE41_RS02365at 471.145 kb on - strand, within ABIE41_RS02365at 471.145 kb on - strand, within ABIE41_RS02365at 471.145 kb on - strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.447 kb on + strand, within ABIE41_RS02365at 471.448 kb on - strand, within ABIE41_RS02365at 471.448 kb on - strand, within ABIE41_RS02365at 471.448 kb on - strand, within ABIE41_RS02365at 471.448 kb on - strand, within ABIE41_RS02365at 471.500 kb on - strand, within ABIE41_RS02365at 471.500 kb on - strand, within ABIE41_RS02365at 471.537 kb on + strand, within ABIE41_RS02365at 471.537 kb on + strand, within ABIE41_RS02365at 471.538 kb on - strand, within ABIE41_RS02365at 471.538 kb on - strand, within ABIE41_RS02365at 471.538 kb on - strand, within ABIE41_RS02365at 471.618 kb on + strand, within ABIE41_RS02365at 471.619 kb on - strand, within ABIE41_RS02365at 471.619 kb on - strand, within ABIE41_RS02365at 471.977 kb on + strand, within ABIE41_RS02370at 471.977 kb on + strand, within ABIE41_RS02370at 471.977 kb on + strand, within ABIE41_RS02370at 471.977 kb on + strand, within ABIE41_RS02370at 471.977 kb on + strand, within ABIE41_RS02370at 471.978 kb on - strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.196 kb on + strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.197 kb on - strand, within ABIE41_RS02370at 472.494 kb on - strand, within ABIE41_RS02370at 472.589 kb on + strand, within ABIE41_RS02370at 472.590 kb on - strand, within ABIE41_RS02370at 472.631 kb on + strand, within ABIE41_RS02370at 472.631 kb on + strand, within ABIE41_RS02370at 472.631 kb on + strand, within ABIE41_RS02370at 472.631 kb on + strand, within ABIE41_RS02370at 472.632 kb on - strand, within ABIE41_RS02370at 472.632 kb on - strand, within ABIE41_RS02370at 472.632 kb on - strand, within ABIE41_RS02370at 472.632 kb on - strand, within ABIE41_RS02370at 472.632 kb on - strand, within ABIE41_RS02370

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Per-strain Table

Position Strand Gene LocusTag Fraction R2A no stress control
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470,278 + ABIE41_RS02360 0.19 +0.1
470,491 + ABIE41_RS02360 0.45 -0.0
470,491 + ABIE41_RS02360 0.45 +0.4
470,491 + ABIE41_RS02360 0.45 -1.4
470,492 - ABIE41_RS02360 0.45 -1.2
470,492 - ABIE41_RS02360 0.45 +0.7
470,492 - ABIE41_RS02360 0.45 +4.0
470,592 - ABIE41_RS02360 0.57 +0.0
470,592 - ABIE41_RS02360 0.57 -0.2
470,592 - ABIE41_RS02360 0.57 +0.3
470,592 - ABIE41_RS02360 0.57 -0.2
470,764 + ABIE41_RS02360 0.78 -0.1
470,764 + ABIE41_RS02360 0.78 -0.7
470,765 - ABIE41_RS02360 0.79 -1.5
470,765 - ABIE41_RS02360 0.79 -0.1
470,765 - ABIE41_RS02360 0.79 -2.7
470,765 - ABIE41_RS02360 0.79 +0.2
470,801 + ABIE41_RS02360 0.83 +0.3
470,801 + ABIE41_RS02360 0.83 -0.8
470,801 + ABIE41_RS02360 0.83 -0.8
470,802 - ABIE41_RS02360 0.83 -0.2
470,803 + ABIE41_RS02360 0.83 +1.0
470,803 + ABIE41_RS02360 0.83 +0.3
470,803 + ABIE41_RS02360 0.83 +0.4
470,803 + ABIE41_RS02360 0.83 -0.7
470,804 - ABIE41_RS02360 0.83 -0.6
471,064 - ABIE41_RS02365 0.14 +0.2
471,078 + ABIE41_RS02365 0.16 +1.9
471,078 + ABIE41_RS02365 0.16 -0.2
471,102 + ABIE41_RS02365 0.18 -1.8
471,102 + ABIE41_RS02365 0.18 +0.7
471,103 - ABIE41_RS02365 0.18 -0.6
471,103 - ABIE41_RS02365 0.18 +0.9
471,103 - ABIE41_RS02365 0.18 -0.5
471,103 - ABIE41_RS02365 0.18 +0.6
471,103 - ABIE41_RS02365 0.18 -1.0
471,144 + ABIE41_RS02365 0.23 -0.2
471,144 + ABIE41_RS02365 0.23 -0.6
471,144 + ABIE41_RS02365 0.23 +0.6
471,144 + ABIE41_RS02365 0.23 +2.1
471,144 + ABIE41_RS02365 0.23 +0.3
471,144 + ABIE41_RS02365 0.23 -0.5
471,144 + ABIE41_RS02365 0.23 +0.4
471,145 - ABIE41_RS02365 0.23 +0.3
471,145 - ABIE41_RS02365 0.23 +1.0
471,145 - ABIE41_RS02365 0.23 +0.1
471,145 - ABIE41_RS02365 0.23 -1.4
471,145 - ABIE41_RS02365 0.23 +0.6
471,447 + ABIE41_RS02365 0.56 -0.0
471,447 + ABIE41_RS02365 0.56 -1.1
471,447 + ABIE41_RS02365 0.56 +0.3
471,447 + ABIE41_RS02365 0.56 -0.9
471,447 + ABIE41_RS02365 0.56 +0.4
471,447 + ABIE41_RS02365 0.56 +0.4
471,447 + ABIE41_RS02365 0.56 -0.1
471,447 + ABIE41_RS02365 0.56 +0.9
471,447 + ABIE41_RS02365 0.56 +3.9
471,447 + ABIE41_RS02365 0.56 +0.5
471,448 - ABIE41_RS02365 0.57 -0.2
471,448 - ABIE41_RS02365 0.57 +2.0
471,448 - ABIE41_RS02365 0.57 +0.1
471,448 - ABIE41_RS02365 0.57 +0.3
471,500 - ABIE41_RS02365 0.62 +0.1
471,500 - ABIE41_RS02365 0.62 -0.8
471,537 + ABIE41_RS02365 0.66 +0.6
471,537 + ABIE41_RS02365 0.66 -2.1
471,538 - ABIE41_RS02365 0.66 -0.5
471,538 - ABIE41_RS02365 0.66 +0.1
471,538 - ABIE41_RS02365 0.66 +1.9
471,618 + ABIE41_RS02365 0.75 -1.7
471,619 - ABIE41_RS02365 0.75 +0.3
471,619 - ABIE41_RS02365 0.75 -0.7
471,977 + ABIE41_RS02370 0.13 +0.0
471,977 + ABIE41_RS02370 0.13 +0.4
471,977 + ABIE41_RS02370 0.13 -0.8
471,977 + ABIE41_RS02370 0.13 +1.7
471,977 + ABIE41_RS02370 0.13 +0.8
471,978 - ABIE41_RS02370 0.13 +1.2
472,196 + ABIE41_RS02370 0.33 -0.5
472,196 + ABIE41_RS02370 0.33 +0.4
472,196 + ABIE41_RS02370 0.33 -0.5
472,196 + ABIE41_RS02370 0.33 -0.2
472,196 + ABIE41_RS02370 0.33 +0.7
472,196 + ABIE41_RS02370 0.33 +0.4
472,196 + ABIE41_RS02370 0.33 +0.2
472,196 + ABIE41_RS02370 0.33 -0.7
472,196 + ABIE41_RS02370 0.33 -0.8
472,197 - ABIE41_RS02370 0.33 -0.1
472,197 - ABIE41_RS02370 0.33 -0.5
472,197 - ABIE41_RS02370 0.33 +0.0
472,197 - ABIE41_RS02370 0.33 -0.3
472,197 - ABIE41_RS02370 0.33 -0.3
472,197 - ABIE41_RS02370 0.33 -0.5
472,197 - ABIE41_RS02370 0.33 +1.0
472,197 - ABIE41_RS02370 0.33 +0.9
472,494 - ABIE41_RS02370 0.60 +1.8
472,589 + ABIE41_RS02370 0.69 -1.8
472,590 - ABIE41_RS02370 0.69 +0.9
472,631 + ABIE41_RS02370 0.73 -2.4
472,631 + ABIE41_RS02370 0.73 -1.1
472,631 + ABIE41_RS02370 0.73 +0.7
472,631 + ABIE41_RS02370 0.73 -0.1
472,632 - ABIE41_RS02370 0.73 -0.1
472,632 - ABIE41_RS02370 0.73 +0.6
472,632 - ABIE41_RS02370 0.73 -0.4
472,632 - ABIE41_RS02370 0.73 +3.1
472,632 - ABIE41_RS02370 0.73 +0.3

Or see this region's nucleotide sequence