Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3945

Experiment: Xylobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylobiose (C)
4,724,376	+				+0.9
4,724,382	+				-0.2
4,724,400	-				+0.2
4,724,455	+				-1.7
4,724,455	+				+0.1
4,724,506	-				-1.4
4,724,526	-				-0.5
4,724,548	+				-0.9
4,724,548	+				+0.1
4,724,571	+				+0.0
4,724,582	-				-0.1
4,724,587	+				+1.6
4,724,603	+				+0.8
4,724,648	+		Echvi_3944	0.10	+0.5
4,724,648	+		Echvi_3944	0.10	-0.4
4,724,649	-		Echvi_3944	0.10	-0.2
4,724,649	-		Echvi_3944	0.10	+0.8
4,724,661	-		Echvi_3944	0.12	+0.9
4,724,669	+		Echvi_3944	0.13	+0.4
4,724,680	+		Echvi_3944	0.15	+0.9
4,724,680	+		Echvi_3944	0.15	+1.3
4,724,680	+		Echvi_3944	0.15	-0.1
4,724,680	+		Echvi_3944	0.15	+1.3
4,724,680	+		Echvi_3944	0.15	-1.1
4,724,681	-		Echvi_3944	0.15	+0.5
4,724,689	-		Echvi_3944	0.16	+0.0
4,724,728	+		Echvi_3944	0.21	-0.7
4,724,785	+		Echvi_3944	0.29	+0.1
4,724,843	+		Echvi_3944	0.37	-0.0
4,724,872	+		Echvi_3944	0.41	+0.3
4,724,873	-		Echvi_3944	0.41	+0.9
4,724,873	-		Echvi_3944	0.41	-0.3
4,724,911	-		Echvi_3944	0.46	+0.1
4,724,989	+		Echvi_3944	0.57	-0.4
4,724,990	-		Echvi_3944	0.57	+0.8
4,724,990	-		Echvi_3944	0.57	-0.2
4,724,991	+		Echvi_3944	0.57	-0.9
4,725,001	+		Echvi_3944	0.58	-0.5
4,725,001	+		Echvi_3944	0.58	+0.3
4,725,002	-		Echvi_3944	0.59	+0.1
4,725,002	-		Echvi_3944	0.59	-1.2
4,725,008	+		Echvi_3944	0.59	-0.4
4,725,009	-		Echvi_3944	0.59	+0.5
4,725,046	+		Echvi_3944	0.64	-0.0
4,725,207	+		Echvi_3944	0.86	+0.2
4,725,208	-		Echvi_3944	0.87	+0.2
4,725,208	-		Echvi_3944	0.87	-0.5
4,725,280	+				-0.3
4,725,309	+				+1.7
4,725,351	+				+0.2
4,725,351	+				+0.7
4,725,373	+				+0.9
4,725,411	-				-0.1
4,725,411	-				-0.8
4,725,514	-				+1.3
4,725,514	-				-1.8
4,725,609	+		Echvi_3945	0.11	+0.8
4,725,691	-		Echvi_3945	0.14	-0.5
4,725,721	+		Echvi_3945	0.15	+0.5
4,725,723	+		Echvi_3945	0.15	+0.1
4,725,840	-		Echvi_3945	0.19	+0.2
4,725,859	+		Echvi_3945	0.20	+0.4
4,725,910	-		Echvi_3945	0.22	-0.8
4,725,975	-		Echvi_3945	0.24	+0.3
4,726,101	-		Echvi_3945	0.29	-1.5
4,726,101	-		Echvi_3945	0.29	+0.0
4,726,311	+		Echvi_3945	0.36	+0.2
4,726,326	-		Echvi_3945	0.37	+0.7
4,726,326	-		Echvi_3945	0.37	-0.5
4,726,326	-		Echvi_3945	0.37	+1.3
4,726,335	+		Echvi_3945	0.37	+0.5
4,726,358	-		Echvi_3945	0.38	+0.6
4,726,399	+		Echvi_3945	0.39	-0.7
4,726,400	-		Echvi_3945	0.39	-0.2
4,726,434	+		Echvi_3945	0.41	+0.6
4,726,435	-		Echvi_3945	0.41	+0.3
4,726,517	-		Echvi_3945	0.44	+0.7
4,726,601	+		Echvi_3945	0.47	-1.2
4,726,693	+		Echvi_3945	0.50	+0.3
4,726,694	-		Echvi_3945	0.50	-0.3
4,726,729	+		Echvi_3945	0.51	-0.2
4,726,729	+		Echvi_3945	0.51	+1.0
4,726,733	-		Echvi_3945	0.51	-1.2
4,726,777	+		Echvi_3945	0.53	-0.3
4,726,819	+		Echvi_3945	0.55	+0.1
4,726,820	-		Echvi_3945	0.55	-0.6
4,726,846	+		Echvi_3945	0.56	+0.8
4,726,847	-		Echvi_3945	0.56	+0.5
4,726,847	-		Echvi_3945	0.56	+0.2
4,726,890	+		Echvi_3945	0.57	+1.1
4,726,918	+		Echvi_3945	0.58	-0.3
4,726,918	+		Echvi_3945	0.58	+0.9
4,726,919	-		Echvi_3945	0.58	+0.8
4,726,919	-		Echvi_3945	0.58	+0.4
4,726,919	-		Echvi_3945	0.58	-0.5
4,726,921	+		Echvi_3945	0.58	+0.5
4,726,921	+		Echvi_3945	0.58	+0.9
4,726,921	+		Echvi_3945	0.58	+1.1
4,726,921	+		Echvi_3945	0.58	-0.5
4,726,922	-		Echvi_3945	0.58	+1.9
4,726,922	-		Echvi_3945	0.58	-0.2
4,726,922	-		Echvi_3945	0.58	+0.1
4,726,953	-		Echvi_3945	0.59	+1.7
4,727,063	-		Echvi_3945	0.63	-0.3
4,727,074	+		Echvi_3945	0.64	-0.9
4,727,084	-		Echvi_3945	0.64	-0.4
4,727,211	-		Echvi_3945	0.69	-1.3
4,727,227	+		Echvi_3945	0.69	-0.1
4,727,227	+		Echvi_3945	0.69	+1.3
4,727,227	+		Echvi_3945	0.69	-0.1
4,727,228	-		Echvi_3945	0.69	+0.1
4,727,228	-		Echvi_3945	0.69	+1.1
4,727,228	-		Echvi_3945	0.69	-1.1
4,727,229	+		Echvi_3945	0.69	+0.3
4,727,229	+		Echvi_3945	0.69	+1.6
4,727,230	-		Echvi_3945	0.69	+0.7
4,727,230	-		Echvi_3945	0.69	+0.2
4,727,230	-		Echvi_3945	0.69	-0.9
4,727,230	-		Echvi_3945	0.69	+1.0
4,727,230	-		Echvi_3945	0.69	+0.2
4,727,251	-		Echvi_3945	0.70	-1.3
4,727,263	+		Echvi_3945	0.71	-0.4
4,727,264	-		Echvi_3945	0.71	+0.2
4,727,282	-		Echvi_3945	0.71	-0.1
4,727,282	-		Echvi_3945	0.71	+0.0
4,727,282	-		Echvi_3945	0.71	+1.1
4,727,347	+		Echvi_3945	0.74	+0.6
4,727,392	-		Echvi_3945	0.75	+1.9
4,727,415	+		Echvi_3945	0.76	+0.2
4,727,440	+		Echvi_3945	0.77	+0.8
4,727,440	+		Echvi_3945	0.77	+0.9
4,727,441	-		Echvi_3945	0.77	+0.1
4,727,444	-		Echvi_3945	0.77	+0.1
4,727,495	+		Echvi_3945	0.79	+0.0
4,727,601	+		Echvi_3945	0.83	-0.4
4,727,601	+		Echvi_3945	0.83	+0.7
4,727,602	-		Echvi_3945	0.83	-0.2
4,727,602	-		Echvi_3945	0.83	-1.0
4,727,605	+		Echvi_3945	0.83	+1.2
4,727,605	+		Echvi_3945	0.83	+2.2
4,727,719	+		Echvi_3945	0.87	+0.7
4,727,719	+		Echvi_3945	0.87	-0.1
4,727,719	+		Echvi_3945	0.87	-0.5
4,727,720	-		Echvi_3945	0.87	+0.2
4,727,806	+				+0.7
4,727,808	+				-0.9
4,727,809	-				+0.3
4,727,809	-				+0.1
4,727,809	-				-2.3
4,727,827	+				-0.7
4,727,828	-				-1.7
4,727,849	-				-0.2
4,727,947	+				+0.0
4,727,947	+				-0.1
4,727,948	-				-0.2
4,727,948	-				-0.1
4,727,948	-				-0.2
4,727,975	-				-0.5
4,727,981	+				+0.7
4,727,982	-				-0.2
4,728,027	+				-1.7
4,728,027	+				-0.5
4,728,028	-				-0.7
4,728,028	-				+0.5
4,728,028	-				+0.6
4,728,031	+				+0.0
4,728,031	+				+0.3
4,728,031	+				+0.0
4,728,031	+				-0.4
4,728,032	-				-0.1
4,728,032	-				-0.0
4,728,032	-				+0.4
4,728,032	-				+0.3
4,728,032	-				+0.3
4,728,049	+				+3.3
4,728,049	+				+0.6
4,728,054	+				+0.1
4,728,054	+				-0.2
4,728,054	+				-0.2
4,728,074	-				-0.5
4,728,101	+				+1.3
4,728,103	+				+0.9
4,728,103	+				-0.0
4,728,103	+				+0.3
4,728,104	-				+0.2
4,728,104	-				-0.2
4,728,104	-				-0.7
4,728,151	+				+0.6
4,728,246	+		Echvi_3946	0.14	+0.0
4,728,277	+		Echvi_3946	0.17	+0.1
4,728,277	+		Echvi_3946	0.17	+1.5
4,728,280	-		Echvi_3946	0.17	-0.4
4,728,281	+		Echvi_3946	0.17	+1.7
4,728,292	-		Echvi_3946	0.18	-0.5
4,728,303	-		Echvi_3946	0.19	+0.3
4,728,303	-		Echvi_3946	0.19	+0.9
4,728,307	-		Echvi_3946	0.19	+0.9
4,728,362	-		Echvi_3946	0.24	-1.0
4,728,482	+		Echvi_3946	0.34	+0.7
4,728,482	+		Echvi_3946	0.34	-0.4
4,728,483	-		Echvi_3946	0.34	-0.4
4,728,501	+		Echvi_3946	0.36	-0.5
4,728,502	-		Echvi_3946	0.36	+0.4
4,728,502	-		Echvi_3946	0.36	-0.1
4,728,526	+		Echvi_3946	0.38	+0.9
4,728,574	+		Echvi_3946	0.42	+0.2
4,728,661	-		Echvi_3946	0.49	+0.4
4,728,698	-		Echvi_3946	0.53	-0.1
4,728,711	+		Echvi_3946	0.54	+0.3
4,728,745	+		Echvi_3946	0.57	-1.5
4,728,745	+		Echvi_3946	0.57	-0.1
4,728,745	+		Echvi_3946	0.57	-0.9
4,728,745	+		Echvi_3946	0.57	+0.8
4,728,746	-		Echvi_3946	0.57	+1.6
4,728,746	-		Echvi_3946	0.57	-0.7
4,728,850	-		Echvi_3946	0.66	+1.7
4,728,850	-		Echvi_3946	0.66	-0.1
4,728,885	+		Echvi_3946	0.69	+0.3
4,728,924	+		Echvi_3946	0.72	-0.3
4,728,955	+		Echvi_3946	0.75	-0.4
4,728,997	-		Echvi_3946	0.78	-0.2
4,729,041	+		Echvi_3946	0.82	+1.1
4,729,071	-		Echvi_3946	0.85	-0.2