Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3816

Experiment: Xylobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylobiose (C)
4,557,143	+		Echvi_3815	0.16	+0.5
4,557,174	+		Echvi_3815	0.19	-1.4
4,557,175	-		Echvi_3815	0.19	-0.6
4,557,236	-		Echvi_3815	0.25	-0.9
4,557,236	-		Echvi_3815	0.25	-0.0
4,557,236	-		Echvi_3815	0.25	-1.3
4,557,262	-		Echvi_3815	0.27	-0.4
4,557,262	-		Echvi_3815	0.27	+0.5
4,557,333	-		Echvi_3815	0.34	-0.1
4,557,353	+		Echvi_3815	0.35	+0.3
4,557,353	+		Echvi_3815	0.35	-1.0
4,557,353	+		Echvi_3815	0.35	+0.2
4,557,354	-		Echvi_3815	0.36	+0.6
4,557,354	-		Echvi_3815	0.36	+0.2
4,557,358	+		Echvi_3815	0.36	-0.0
4,557,359	-		Echvi_3815	0.36	-0.4
4,557,398	-		Echvi_3815	0.40	+1.6
4,557,439	-		Echvi_3815	0.43	+0.1
4,557,542	+		Echvi_3815	0.53	-0.6
4,557,543	-		Echvi_3815	0.53	+0.1
4,557,560	-		Echvi_3815	0.55	-1.3
4,557,560	-		Echvi_3815	0.55	-0.3
4,557,638	-		Echvi_3815	0.62	-0.1
4,557,745	+		Echvi_3815	0.72	-1.5
4,557,746	-		Echvi_3815	0.72	+1.3
4,557,758	-		Echvi_3815	0.73	-0.7
4,557,760	+		Echvi_3815	0.73	-1.2
4,557,760	+		Echvi_3815	0.73	-0.5
4,557,760	+		Echvi_3815	0.73	-0.1
4,557,772	+		Echvi_3815	0.74	+0.4
4,557,803	+		Echvi_3815	0.77	-0.2
4,557,821	-		Echvi_3815	0.79	-0.4
4,557,821	-		Echvi_3815	0.79	-0.1
4,557,837	-		Echvi_3815	0.80	+0.6
4,557,837	-		Echvi_3815	0.80	+0.3
4,557,861	+		Echvi_3815	0.82	+0.2
4,557,861	+		Echvi_3815	0.82	-0.2
4,557,862	-		Echvi_3815	0.83	+0.0
4,557,863	+		Echvi_3815	0.83	-0.3
4,557,863	+		Echvi_3815	0.83	-0.5
4,557,863	+		Echvi_3815	0.83	-0.3
4,557,864	-		Echvi_3815	0.83	-1.0
4,557,916	-		Echvi_3815	0.88	+0.9
4,557,917	+		Echvi_3815	0.88	-0.5
4,557,917	+		Echvi_3815	0.88	-0.7
4,557,917	+		Echvi_3815	0.88	+0.4
4,557,918	-		Echvi_3815	0.88	-0.6
4,557,969	+				-0.5
4,557,969	+				-0.1
4,557,972	+				+0.0
4,557,972	+				+0.4
4,557,972	+				+1.3
4,557,972	+				+0.0
4,557,972	+				+0.1
4,557,972	+				+0.0
4,557,973	-				-0.1
4,558,029	+				+0.3
4,558,029	+				+0.0
4,558,030	-				-0.6
4,558,061	+				-0.2
4,558,061	+				+0.3
4,558,061	+				-0.0
4,558,061	+				+0.3
4,558,062	-				+0.2
4,558,064	+				+0.9
4,558,105	+				-0.4
4,558,249	-				-0.7
4,558,258	-				+0.9
4,558,258	-				-0.2
4,558,259	+				-0.4
4,558,259	+				+0.5
4,558,259	+				+1.7
4,558,260	-				-0.4
4,558,260	-				-0.2
4,558,294	+		Echvi_3816	0.12	-0.8
4,558,294	+		Echvi_3816	0.12	+0.4
4,558,295	-		Echvi_3816	0.12	+0.6
4,558,295	-		Echvi_3816	0.12	-0.9
4,558,299	-		Echvi_3816	0.12	+0.1
4,558,313	-		Echvi_3816	0.13	+0.9
4,558,314	+		Echvi_3816	0.13	+0.8
4,558,314	+		Echvi_3816	0.13	+0.0
4,558,580	-		Echvi_3816	0.30	+0.1
4,558,581	+		Echvi_3816	0.30	-0.2
4,558,581	+		Echvi_3816	0.30	-0.8
4,558,582	-		Echvi_3816	0.30	-1.3
4,558,647	+		Echvi_3816	0.34	+0.3
4,558,744	+		Echvi_3816	0.41	+0.6
4,558,852	-		Echvi_3816	0.48	-0.3
4,558,853	+		Echvi_3816	0.48	+0.6
4,558,853	+		Echvi_3816	0.48	+1.4
4,558,853	+		Echvi_3816	0.48	-0.9
4,558,961	-		Echvi_3816	0.55	-1.0
4,558,967	+		Echvi_3816	0.55	+1.9
4,558,968	-		Echvi_3816	0.55	-0.4
4,558,997	-		Echvi_3816	0.57	+0.1
4,559,038	+		Echvi_3816	0.59	+0.5
4,559,089	+		Echvi_3816	0.63	-0.4
4,559,134	-		Echvi_3816	0.66	-1.1
4,559,134	-		Echvi_3816	0.66	+1.5
4,559,134	-		Echvi_3816	0.66	+0.8
4,559,170	+		Echvi_3816	0.68	+0.3
4,559,170	+		Echvi_3816	0.68	+0.7
4,559,171	-		Echvi_3816	0.68	-0.9
4,559,189	+		Echvi_3816	0.69	+0.3
4,559,190	-		Echvi_3816	0.69	+0.4
4,559,190	-		Echvi_3816	0.69	+0.1
4,559,229	-		Echvi_3816	0.72	+0.4
4,559,276	-		Echvi_3816	0.75	+0.4
4,559,277	+		Echvi_3816	0.75	+1.0
4,559,277	+		Echvi_3816	0.75	+2.3
4,559,277	+		Echvi_3816	0.75	-0.5
4,559,278	-		Echvi_3816	0.75	-0.6
4,559,278	-		Echvi_3816	0.75	+0.3
4,559,280	+		Echvi_3816	0.75	+0.7
4,559,280	+		Echvi_3816	0.75	+0.0
4,559,280	+		Echvi_3816	0.75	+1.9
4,559,280	+		Echvi_3816	0.75	+0.1
4,559,281	-		Echvi_3816	0.75	+0.1
4,559,281	-		Echvi_3816	0.75	-0.1
4,559,416	+		Echvi_3816	0.84	+1.0
4,559,417	-		Echvi_3816	0.84	-0.7
4,559,436	+		Echvi_3816	0.85	-0.0
4,559,488	+		Echvi_3816	0.88	-0.4
4,559,491	+		Echvi_3816	0.89	+0.3
4,559,491	+		Echvi_3816	0.89	+0.8
4,559,544	+				-1.3
4,559,545	-				+0.5
4,559,545	-				+0.2
4,559,558	-				+0.7
4,559,611	+				-0.3
4,559,612	-				-2.1
4,559,660	-				-1.3
4,559,680	+				-0.4
4,559,681	-				+0.4
4,559,696	+				-0.9
4,559,697	-				+0.6
4,559,735	+				-0.1
4,559,876	-				+0.5
4,559,878	-				+0.4
4,559,881	-				-0.6
4,559,988	+				+1.3
4,559,999	+				-1.2
4,559,999	+				+0.7
4,560,000	-				+0.7
4,560,001	+				-0.5
4,560,001	+				-1.0
4,560,017	-				-0.1
4,560,131	-				+0.9
4,560,171	-		Echvi_3817	0.14	-0.5
4,560,177	-		Echvi_3817	0.15	+0.1
4,560,177	-		Echvi_3817	0.15	-0.0
4,560,177	-		Echvi_3817	0.15	+0.7
4,560,207	+		Echvi_3817	0.17	-1.9
4,560,207	+		Echvi_3817	0.17	+0.4
4,560,207	+		Echvi_3817	0.17	-0.6
4,560,208	-		Echvi_3817	0.17	-0.3
4,560,208	-		Echvi_3817	0.17	-0.4
4,560,208	-		Echvi_3817	0.17	+0.1
4,560,214	+		Echvi_3817	0.17	-1.3
4,560,214	+		Echvi_3817	0.17	+0.6
4,560,219	+		Echvi_3817	0.18	+0.1
4,560,219	+		Echvi_3817	0.18	-1.4
4,560,219	+		Echvi_3817	0.18	+0.0
4,560,219	+		Echvi_3817	0.18	-0.6
4,560,219	+		Echvi_3817	0.18	+2.2
4,560,219	+		Echvi_3817	0.18	-0.7
4,560,220	-				-0.1
4,560,221	+		Echvi_3817	0.18	+2.1
4,560,222	-		Echvi_3817	0.18	+0.0
4,560,222	-		Echvi_3817	0.18	+0.4
4,560,269	+		Echvi_3817	0.21	+0.0
4,560,269	+		Echvi_3817	0.21	+1.0
4,560,269	+		Echvi_3817	0.21	-0.6
4,560,269	+		Echvi_3817	0.21	-0.8
4,560,270	-		Echvi_3817	0.21	-0.3
4,560,270	-		Echvi_3817	0.21	-0.2
4,560,270	-		Echvi_3817	0.21	+1.2
4,560,270	-		Echvi_3817	0.21	+0.9
4,560,270	-		Echvi_3817	0.21	+0.2
4,560,270	-		Echvi_3817	0.21	+0.4
4,560,273	+		Echvi_3817	0.21	-0.0
4,560,274	-		Echvi_3817	0.21	+0.3
4,560,274	-		Echvi_3817	0.21	-0.9
4,560,274	-		Echvi_3817	0.21	-0.2
4,560,350	-		Echvi_3817	0.27	+0.3
4,560,363	-		Echvi_3817	0.28	+0.2
4,560,484	-		Echvi_3817	0.36	-0.1
4,560,489	+		Echvi_3817	0.37	-0.1
4,560,490	-		Echvi_3817	0.37	-1.2
4,560,490	-		Echvi_3817	0.37	-0.7
4,560,518	+		Echvi_3817	0.39	-0.2
4,560,519	-		Echvi_3817	0.39	-0.5
4,560,577	-				-1.6
4,560,626	+		Echvi_3817	0.47	+1.2