Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3449

Experiment: Xylobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylobiose (C)
4,078,032	-		Echvi_3447	0.58	-0.4
4,078,036	+		Echvi_3447	0.58	+0.5
4,078,037	-		Echvi_3447	0.58	+1.0
4,078,038	+		Echvi_3447	0.59	-0.7
4,078,055	-		Echvi_3447	0.61	-0.6
4,078,116	-		Echvi_3447	0.70	-0.9
4,078,125	+		Echvi_3447	0.71	+1.0
4,078,125	+		Echvi_3447	0.71	+0.3
4,078,125	+		Echvi_3447	0.71	-0.2
4,078,126	-		Echvi_3447	0.71	-0.3
4,078,224	+		Echvi_3447	0.85	+0.2
4,078,224	+		Echvi_3447	0.85	+0.0
4,078,226	+		Echvi_3447	0.85	+0.1
4,078,226	+		Echvi_3447	0.85	-1.6
4,078,248	+		Echvi_3447	0.89	-0.1
4,078,313	+				+0.1
4,078,352	+				+1.2
4,078,352	+				-0.3
4,078,352	+				-1.5
4,078,353	-				+0.4
4,078,373	+				-0.6
4,078,373	+				-1.3
4,078,374	-				-1.0
4,078,426	+				+0.4
4,078,427	-				-0.5
4,078,427	-				+0.9
4,078,437	-				-0.4
4,078,523	-		Echvi_3448	0.22	+0.2
4,078,525	+		Echvi_3448	0.22	-0.1
4,078,525	+		Echvi_3448	0.22	-0.4
4,078,526	-		Echvi_3448	0.23	-0.3
4,078,526	-		Echvi_3448	0.23	-0.4
4,078,536	-		Echvi_3448	0.25	-1.0
4,078,561	-		Echvi_3448	0.29	+0.7
4,078,561	-		Echvi_3448	0.29	+0.1
4,078,561	-		Echvi_3448	0.29	+1.0
4,078,661	+		Echvi_3448	0.48	-0.6
4,078,661	+		Echvi_3448	0.48	+0.4
4,078,662	-		Echvi_3448	0.49	-0.1
4,078,662	-		Echvi_3448	0.49	+0.4
4,078,726	-		Echvi_3448	0.61	-0.4
4,078,776	+		Echvi_3448	0.70	+0.1
4,078,777	-		Echvi_3448	0.70	-1.6
4,078,777	-		Echvi_3448	0.70	-0.9
4,078,793	+		Echvi_3448	0.74	-0.2
4,078,794	-		Echvi_3448	0.74	-0.9
4,078,794	-		Echvi_3448	0.74	-0.4
4,078,808	+		Echvi_3448	0.76	-0.1
4,078,808	+		Echvi_3448	0.76	+0.1
4,078,844	+		Echvi_3448	0.83	-1.3
4,078,845	-		Echvi_3448	0.83	+0.1
4,078,847	+		Echvi_3448	0.84	+0.4
4,078,867	-		Echvi_3448	0.88	-0.6
4,078,870	+		Echvi_3448	0.88	+0.3
4,078,888	+				-0.4
4,078,955	+				-1.3
4,078,956	-				+0.1
4,078,961	-				-0.4
4,079,001	+				-0.2
4,079,006	+				+0.4
4,079,007	-				+0.7
4,079,007	-				-0.3
4,079,010	+				-0.2
4,079,011	-				-0.4
4,079,011	-				-0.1
4,079,011	-				-0.3
4,079,011	-				-0.7
4,079,043	+				+1.4
4,079,043	+				+0.3
4,079,044	-				-1.7
4,079,044	-				-0.9
4,079,044	-				-0.2
4,079,044	-				-0.8
4,079,081	+				-0.7
4,079,152	+		Echvi_3449	0.21	+0.9
4,079,153	-		Echvi_3449	0.21	-0.8
4,079,171	+		Echvi_3449	0.24	-1.8
4,079,171	+		Echvi_3449	0.24	-0.6
4,079,171	+		Echvi_3449	0.24	-0.2
4,079,177	+		Echvi_3449	0.25	+0.3
4,079,178	-		Echvi_3449	0.25	-0.4
4,079,178	-		Echvi_3449	0.25	-0.5
4,079,197	+		Echvi_3449	0.28	-0.3
4,079,197	+		Echvi_3449	0.28	+0.7
4,079,233	+		Echvi_3449	0.34	+0.0
4,079,234	-		Echvi_3449	0.35	-2.2
4,079,251	+		Echvi_3449	0.37	+0.2
4,079,268	+		Echvi_3449	0.40	-0.7
4,079,332	+		Echvi_3449	0.51	-0.7
4,079,332	+		Echvi_3449	0.51	-0.7
4,079,332	+		Echvi_3449	0.51	+0.3
4,079,389	+		Echvi_3449	0.61	-0.6
4,079,390	-		Echvi_3449	0.61	-1.1
4,079,401	+		Echvi_3449	0.63	+0.6
4,079,410	+		Echvi_3449	0.64	-0.1
4,079,410	+		Echvi_3449	0.64	+1.4
4,079,410	+		Echvi_3449	0.64	-0.6
4,079,410	+		Echvi_3449	0.64	+0.0
4,079,410	+		Echvi_3449	0.64	-0.2
4,079,411	-		Echvi_3449	0.64	-0.6
4,079,411	-		Echvi_3449	0.64	-0.9
4,079,415	+		Echvi_3449	0.65	+0.1
4,079,415	+		Echvi_3449	0.65	+1.2
4,079,415	+		Echvi_3449	0.65	-0.8
4,079,415	+		Echvi_3449	0.65	-0.1
4,079,416	-		Echvi_3449	0.65	+0.1
4,079,416	-		Echvi_3449	0.65	-0.7
4,079,416	-		Echvi_3449	0.65	-0.7
4,079,416	-		Echvi_3449	0.65	-1.3
4,079,418	-		Echvi_3449	0.66	+0.0
4,079,446	-		Echvi_3449	0.70	-0.2
4,079,490	+		Echvi_3449	0.78	-0.4
4,079,490	+		Echvi_3449	0.78	-0.5
4,079,490	+		Echvi_3449	0.78	+0.6
4,079,490	+		Echvi_3449	0.78	+1.2
4,079,490	+		Echvi_3449	0.78	+0.2
4,079,491	-		Echvi_3449	0.78	-0.9
4,079,491	-		Echvi_3449	0.78	+0.1
4,079,491	-		Echvi_3449	0.78	+1.2
4,079,491	-		Echvi_3449	0.78	-0.4
4,079,491	-				+1.9
4,079,496	-		Echvi_3449	0.79	+0.5
4,079,496	-		Echvi_3449	0.79	-0.4
4,079,498	-		Echvi_3449	0.79	+0.4
4,079,522	-		Echvi_3449	0.83	-0.5
4,079,536	-		Echvi_3449	0.86	-0.1
4,079,596	+				+0.7
4,079,596	+				+0.4
4,079,596	+				+0.0
4,079,596	+				+1.0
4,079,596	+				+1.1
4,079,597	-				+0.2
4,079,597	-				+0.9
4,079,649	+				+0.2
4,079,649	+				+1.0
4,079,690	-				+0.1
4,079,690	-				+0.5
4,079,700	+				+0.5
4,079,700	+				-0.8
4,079,700	+				+1.3
4,079,700	+				+0.9
4,079,700	+				-0.2
4,079,700	+				+1.5
4,079,701	-				+0.6
4,079,701	-				-0.1
4,079,701	-				+0.8
4,079,704	+				+0.2
4,079,704	+				-0.6
4,079,705	-				-1.0
4,079,705	-				+0.7
4,079,705	-				+0.2
4,079,820	+		Echvi_3450	0.21	+0.9
4,079,820	+		Echvi_3450	0.21	-0.5
4,079,822	+		Echvi_3450	0.21	+0.2
4,079,822	+		Echvi_3450	0.21	-0.4
4,079,823	-		Echvi_3450	0.21	+0.4
4,079,841	+		Echvi_3450	0.23	+0.8
4,079,877	+		Echvi_3450	0.28	-0.3
4,079,917	-		Echvi_3450	0.33	-0.0
4,080,021	-		Echvi_3450	0.47	-0.0
4,080,071	+		Echvi_3450	0.53	+1.6
4,080,119	-		Echvi_3450	0.60	-0.5
4,080,185	-		Echvi_3450	0.68	-1.6
4,080,188	+		Echvi_3450	0.68	+0.2
4,080,189	-		Echvi_3450	0.69	-0.0
4,080,189	-		Echvi_3450	0.69	-0.5
4,080,189	-		Echvi_3450	0.69	+0.9
4,080,275	+		Echvi_3450	0.80	-0.2
4,080,276	-		Echvi_3450	0.80	-0.3
4,080,276	-		Echvi_3450	0.80	-0.6
4,080,276	-		Echvi_3450	0.80	+0.5
4,080,327	+		Echvi_3450	0.87	+0.9
4,080,347	+		Echvi_3450	0.89	-0.9
4,080,352	-		Echvi_3450	0.90	+1.2
4,080,400	+				-0.2
4,080,400	+				+0.2
4,080,401	-				-0.4
4,080,401	-				+0.3
4,080,401	-				-0.1
4,080,466	+				+1.2
4,080,466	+				+0.3
4,080,466	+				+1.0
4,080,466	+				+0.3
4,080,466	+				-0.2
4,080,467	-				+0.0
4,080,513	-				+0.8
4,080,549	+				-0.1
4,080,549	+				-1.5
4,080,565	-				+0.2