Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4225

Experiment: apoplastic; Green bean; 6 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic; Green bean; 6 days
5,030,351	-				+1.2
5,030,361	+				-1.5
5,030,509	+				-1.0
5,030,509	+				+0.5
5,030,509	+				-0.5
5,030,510	-				+0.9
5,030,510	-				+1.6
5,030,510	-				-0.4
5,030,510	-				-1.2
5,030,623	+				+1.5
5,030,624	-				-2.1
5,030,649	+				+1.1
5,030,649	+				-0.2
5,030,649	+				+1.0
5,030,650	-				-2.9
5,030,650	-				+1.2
5,030,650	-				-0.6
5,030,650	-				-0.3
5,030,687	+				+0.0
5,030,687	+				+0.6
5,030,687	+				-3.4
5,030,687	+				-0.5
5,030,687	+				-0.4
5,030,687	+				+0.4
5,030,688	-				+0.4
5,030,688	-				+0.5
5,030,688	-				-2.1
5,030,688	-				+2.4
5,030,688	-				-0.4
5,030,789	+				+0.6
5,030,790	-				-1.9
5,030,790	-				+0.3
5,030,790	-				-0.2
5,030,790	-				-0.1
5,030,790	-				+0.2
5,030,801	+				-1.1
5,030,801	+				+1.1
5,030,802	-				-0.5
5,030,802	-				-0.5
5,030,844	+				+0.3
5,030,844	+				-0.2
5,030,844	+				+0.6
5,030,844	+				+0.9
5,030,844	+				-2.5
5,030,844	+				+1.5
5,030,845	-				-0.8
5,030,845	-				-0.1
5,030,845	-				-0.1
5,030,845	-				-0.4
5,030,845	-				-1.7
5,030,992	+		Psyr_4224	0.63	+0.9
5,030,993	-		Psyr_4224	0.64	+0.6
5,031,000	-		Psyr_4224	0.67	+2.0
5,031,126	+				+0.5
5,031,127	-				-0.5
5,031,127	-				-1.4
5,031,127	-				-2.0
5,031,131	+				+0.1
5,031,131	+				-1.0
5,031,131	+				-0.9
5,031,131	+				+0.1
5,031,132	-				-1.1
5,031,132	-				-1.7
5,031,132	-				-2.6
5,031,132	-				+1.4
5,031,132	-				-2.8
5,031,154	-				-1.2
5,031,167	+				-1.4
5,031,167	+				+0.7
5,031,168	-				+0.1
5,031,246	-				+0.4
5,031,251	+				+2.2
5,031,251	+				+0.6
5,031,251	+				+0.5
5,031,252	-				+0.5
5,031,252	-				-0.9
5,031,418	-				+1.1
5,031,485	+		Psyr_4225	0.10	-0.2
5,031,485	+		Psyr_4225	0.10	+0.2
5,031,485	+		Psyr_4225	0.10	+1.4
5,031,485	+		Psyr_4225	0.10	+2.2
5,031,485	+		Psyr_4225	0.10	-1.5
5,031,485	+		Psyr_4225	0.10	+2.5
5,031,485	+		Psyr_4225	0.10	+1.4
5,031,485	+		Psyr_4225	0.10	-0.6
5,031,485	+		Psyr_4225	0.10	+0.2
5,031,485	+		Psyr_4225	0.10	-0.7
5,031,485	+		Psyr_4225	0.10	-0.8
5,031,485	+		Psyr_4225	0.10	-0.2
5,031,485	+		Psyr_4225	0.10	-1.7
5,031,485	+		Psyr_4225	0.10	+0.0
5,031,485	+		Psyr_4225	0.10	-0.0
5,031,486	-		Psyr_4225	0.10	-2.8
5,031,486	-		Psyr_4225	0.10	+1.1
5,031,486	-		Psyr_4225	0.10	-0.4
5,031,486	-		Psyr_4225	0.10	+1.1
5,031,486	-		Psyr_4225	0.10	-1.0
5,031,486	-		Psyr_4225	0.10	-0.3
5,031,486	-		Psyr_4225	0.10	+0.0
5,031,486	-		Psyr_4225	0.10	+0.1
5,031,486	-		Psyr_4225	0.10	+0.6
5,031,486	-		Psyr_4225	0.10	+0.7
5,031,486	-		Psyr_4225	0.10	+0.9
5,031,486	-		Psyr_4225	0.10	+1.1
5,031,486	-		Psyr_4225	0.10	-0.5
5,031,486	-		Psyr_4225	0.10	+0.0
5,031,486	-		Psyr_4225	0.10	+1.4
5,031,489	+		Psyr_4225	0.11	-0.5
5,031,590	+		Psyr_4225	0.17	-2.6
5,031,590	+		Psyr_4225	0.17	-0.4
5,031,590	+		Psyr_4225	0.17	+1.0
5,031,590	+		Psyr_4225	0.17	+0.3
5,031,590	+		Psyr_4225	0.17	-0.7
5,031,590	+		Psyr_4225	0.17	-1.1
5,031,590	+		Psyr_4225	0.17	-0.3
5,031,590	+		Psyr_4225	0.17	+0.8
5,031,590	+		Psyr_4225	0.17	+0.6
5,031,590	+		Psyr_4225	0.17	-0.9
5,031,590	+		Psyr_4225	0.17	-1.7
5,031,590	+		Psyr_4225	0.17	-0.5
5,031,590	+		Psyr_4225	0.17	-0.5
5,031,590	+		Psyr_4225	0.17	-3.2
5,031,591	-		Psyr_4225	0.17	+0.0
5,031,591	-		Psyr_4225	0.17	+0.1
5,031,591	-		Psyr_4225	0.17	-1.1
5,031,591	-		Psyr_4225	0.17	+0.1
5,031,591	-		Psyr_4225	0.17	-1.1
5,031,591	-		Psyr_4225	0.17	+0.4
5,031,591	-		Psyr_4225	0.17	-0.2
5,031,906	+		Psyr_4225	0.38	-0.1
5,031,906	+		Psyr_4225	0.38	+1.0
5,031,907	-		Psyr_4225	0.38	-1.4
5,031,907	-		Psyr_4225	0.38	-1.2
5,031,907	-		Psyr_4225	0.38	-1.9
5,031,924	+		Psyr_4225	0.39	+0.6
5,031,981	+		Psyr_4225	0.42	+0.5
5,031,982	-		Psyr_4225	0.42	+0.5
5,032,172	+		Psyr_4225	0.55	+0.0
5,032,172	+		Psyr_4225	0.55	+0.9
5,032,172	+		Psyr_4225	0.55	-0.4
5,032,173	-		Psyr_4225	0.55	+0.5
5,032,173	-		Psyr_4225	0.55	+0.0
5,032,173	-		Psyr_4225	0.55	-1.1
5,032,173	-		Psyr_4225	0.55	-0.4
5,032,297	+		Psyr_4225	0.63	+0.3
5,032,297	+		Psyr_4225	0.63	+0.4
5,032,297	+		Psyr_4225	0.63	+1.3
5,032,302	-		Psyr_4225	0.63	+1.7
5,032,307	-		Psyr_4225	0.63	-0.1
5,032,320	+		Psyr_4225	0.64	+0.1
5,032,320	+		Psyr_4225	0.64	+1.6
5,032,320	+		Psyr_4225	0.64	+0.1
5,032,320	+		Psyr_4225	0.64	-0.2
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,320	+		Psyr_4225	0.64	+0.4
5,032,320	+		Psyr_4225	0.64	+1.7
5,032,320	+		Psyr_4225	0.64	-1.7
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	+0.1
5,032,320	+		Psyr_4225	0.64	+1.1
5,032,320	+		Psyr_4225	0.64	-0.8
5,032,320	+		Psyr_4225	0.64	-0.2
5,032,320	+		Psyr_4225	0.64	+0.8
5,032,320	+		Psyr_4225	0.64	+0.5
5,032,320	+		Psyr_4225	0.64	+0.6
5,032,320	+		Psyr_4225	0.64	-1.8
5,032,320	+		Psyr_4225	0.64	+0.4
5,032,320	+		Psyr_4225	0.64	-0.6
5,032,321	-		Psyr_4225	0.64	-1.1
5,032,321	-		Psyr_4225	0.64	+0.9
5,032,321	-		Psyr_4225	0.64	+0.1
5,032,321	-		Psyr_4225	0.64	-0.0
5,032,321	-		Psyr_4225	0.64	-1.4
5,032,321	-		Psyr_4225	0.64	+2.4
5,032,321	-		Psyr_4225	0.64	-0.9
5,032,321	-		Psyr_4225	0.64	+0.8
5,032,321	-		Psyr_4225	0.64	-0.1
5,032,321	-		Psyr_4225	0.64	+1.1
5,032,321	-		Psyr_4225	0.64	+0.1
5,032,321	-		Psyr_4225	0.64	+0.1
5,032,321	-		Psyr_4225	0.64	-0.6
5,032,321	-		Psyr_4225	0.64	+0.4
5,032,321	-		Psyr_4225	0.64	-0.9
5,032,321	-		Psyr_4225	0.64	-3.3
5,032,321	-		Psyr_4225	0.64	+2.3
5,032,321	-		Psyr_4225	0.64	+0.5
5,032,321	-		Psyr_4225	0.64	+0.4
5,032,321	-		Psyr_4225	0.64	-1.2
5,032,356	+		Psyr_4225	0.66	-1.0
5,032,357	-		Psyr_4225	0.67	-0.2
5,032,395	+		Psyr_4225	0.69	-1.7
5,032,395	+		Psyr_4225	0.69	+0.1
5,032,396	-		Psyr_4225	0.69	+0.4
5,032,533	+		Psyr_4225	0.78	-1.9
5,032,534	-		Psyr_4225	0.78	-0.9
5,032,534	-		Psyr_4225	0.78	-0.6
5,032,718	-		Psyr_4225	0.90	-0.1
5,032,727	-				-0.5
5,032,727	-				-0.5
5,032,740	-				+0.4
5,032,842	+				+0.4
5,032,842	+				+1.2
5,032,842	+				+2.1
5,032,842	+				+0.4
5,032,842	+				-1.2
5,032,842	+				-2.4
5,032,842	+				+0.1
5,032,843	-				-0.7
5,032,843	-				-0.5
5,032,843	-				-0.7
5,032,843	-				-3.1
5,032,843	-				-0.9
5,032,843	-				+1.0
5,032,843	-				-0.9
5,032,993	+				+2.0
5,032,993	+				-0.3
5,032,994	-				+1.1
5,033,071	+		Psyr_4226	0.13	+2.3
5,033,072	-		Psyr_4226	0.13	+0.6
5,033,072	-		Psyr_4226	0.13	-1.4
5,033,254	+		Psyr_4226	0.26	-3.0
5,033,254	+		Psyr_4226	0.26	-2.4
5,033,254	+		Psyr_4226	0.26	+0.8
5,033,254	+		Psyr_4226	0.26	+1.4
5,033,255	-		Psyr_4226	0.27	+1.0
5,033,255	-		Psyr_4226	0.27	-0.8
5,033,255	-		Psyr_4226	0.27	-0.3
5,033,255	-		Psyr_4226	0.27	-1.2
5,033,255	-		Psyr_4226	0.27	-3.0
5,033,482	+		Psyr_4226	0.43	+1.0
5,033,482	+		Psyr_4226	0.43	+0.3
5,033,482	+		Psyr_4226	0.43	-0.6
5,033,482	+		Psyr_4226	0.43	+0.7
5,033,483	-		Psyr_4226	0.43	-3.7
5,033,483	-		Psyr_4226	0.43	+1.1
5,033,483	-		Psyr_4226	0.43	-0.4
5,033,503	+		Psyr_4226	0.44	+0.4
5,033,515	+		Psyr_4226	0.45	+1.0
5,033,515	+		Psyr_4226	0.45	+0.3
5,033,515	+		Psyr_4226	0.45	+1.1
5,033,515	+		Psyr_4226	0.45	+0.5
5,033,515	+		Psyr_4226	0.45	+0.8
5,033,515	+		Psyr_4226	0.45	-0.7
5,033,515	+		Psyr_4226	0.45	-0.7
5,033,515	+		Psyr_4226	0.45	-0.6
5,033,515	+		Psyr_4226	0.45	+0.9
5,033,516	-		Psyr_4226	0.45	+0.2
5,033,516	-		Psyr_4226	0.45	+1.1
5,033,516	-		Psyr_4226	0.45	+0.8
5,033,516	-		Psyr_4226	0.45	+1.4
5,033,516	-		Psyr_4226	0.45	-0.9
5,033,516	-		Psyr_4226	0.45	-1.8
5,033,531	+		Psyr_4226	0.46	+0.7
5,033,531	+		Psyr_4226	0.46	+1.0
5,033,531	+		Psyr_4226	0.46	-1.3
5,033,531	+		Psyr_4226	0.46	-1.7
5,033,531	+		Psyr_4226	0.46	-0.8
5,033,531	+		Psyr_4226	0.46	-0.3
5,033,532	-		Psyr_4226	0.47	+1.5
5,033,532	-		Psyr_4226	0.47	-0.9
5,033,532	-		Psyr_4226	0.47	-0.5
5,033,532	-		Psyr_4226	0.47	+0.9
5,033,557	+		Psyr_4226	0.48	+0.5
5,033,557	+		Psyr_4226	0.48	+0.5
5,033,557	+		Psyr_4226	0.48	-0.6
5,033,557	+		Psyr_4226	0.48	+0.5
5,033,558	-		Psyr_4226	0.48	-1.2
5,033,558	-		Psyr_4226	0.48	-0.9
5,033,558	-		Psyr_4226	0.48	-0.1
5,033,558	-		Psyr_4226	0.48	+0.2
5,033,558	-		Psyr_4226	0.48	+2.8
5,033,558	-		Psyr_4226	0.48	-0.5
5,033,692	+		Psyr_4226	0.58	+0.7
5,033,692	+		Psyr_4226	0.58	-0.3
5,033,693	-		Psyr_4226	0.58	+0.7
5,033,768	-		Psyr_4226	0.64	+0.3
5,033,768	-		Psyr_4226	0.64	+0.8
5,033,773	+		Psyr_4226	0.64	-0.3
5,033,773	+		Psyr_4226	0.64	-1.9
5,033,774	-		Psyr_4226	0.64	+1.1
5,033,818	+		Psyr_4226	0.67	+0.2
5,033,819	-		Psyr_4226	0.67	-0.1
5,033,819	-		Psyr_4226	0.67	+0.1