Strain Fitness in Pseudomonas syringae pv. syringae B728a ΔmexB around Psyr_4023

Experiment: apoplastic; Green bean; 6 days

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	apoplastic; Green bean; 6 days
4,789,477	+				+0.8
4,789,477	+				+0.6
4,789,478	-				-0.8
4,789,478	-				-0.2
4,789,478	-				+1.3
4,789,478	-				-2.1
4,789,850	-		Psyr_4022	0.38	-0.7
4,789,850	-		Psyr_4022	0.38	-2.0
4,789,850	-		Psyr_4022	0.38	-1.1
4,789,870	+		Psyr_4022	0.40	+1.0
4,789,870	+		Psyr_4022	0.40	+0.7
4,789,870	+		Psyr_4022	0.40	+1.6
4,789,870	+		Psyr_4022	0.40	-1.4
4,789,871	-		Psyr_4022	0.40	-0.8
4,789,871	-		Psyr_4022	0.40	+0.0
4,789,871	-		Psyr_4022	0.40	-0.3
4,789,871	-		Psyr_4022	0.40	+1.6
4,789,911	+		Psyr_4022	0.44	+2.9
4,789,911	+		Psyr_4022	0.44	+0.0
4,789,911	+		Psyr_4022	0.44	-1.7
4,789,911	+		Psyr_4022	0.44	+1.0
4,789,911	+		Psyr_4022	0.44	-0.5
4,789,911	+		Psyr_4022	0.44	+0.2
4,789,911	+		Psyr_4022	0.44	-0.5
4,789,911	+		Psyr_4022	0.44	-1.9
4,789,911	+		Psyr_4022	0.44	-0.1
4,789,911	+		Psyr_4022	0.44	+0.2
4,789,911	+		Psyr_4022	0.44	-2.8
4,789,911	+		Psyr_4022	0.44	-1.5
4,789,911	+		Psyr_4022	0.44	+0.6
4,789,911	+		Psyr_4022	0.44	+0.5
4,789,912	-		Psyr_4022	0.44	-0.5
4,789,912	-		Psyr_4022	0.44	-1.6
4,789,912	-		Psyr_4022	0.44	-2.9
4,789,912	-		Psyr_4022	0.44	-0.2
4,789,912	-		Psyr_4022	0.44	+0.2
4,789,912	-		Psyr_4022	0.44	+1.0
4,789,912	-		Psyr_4022	0.44	-0.2
4,789,912	-		Psyr_4022	0.44	+0.9
4,789,912	-		Psyr_4022	0.44	-0.0
4,789,912	-		Psyr_4022	0.44	-0.8
4,789,912	-		Psyr_4022	0.44	+0.3
4,789,912	-		Psyr_4022	0.44	-0.7
4,789,912	-		Psyr_4022	0.44	+1.6
4,789,912	-		Psyr_4022	0.44	+0.0
4,789,912	-		Psyr_4022	0.44	-0.0
4,789,912	-		Psyr_4022	0.44	-1.1
4,789,915	+		Psyr_4022	0.44	-1.1
4,789,915	+		Psyr_4022	0.44	+1.0
4,789,915	+		Psyr_4022	0.44	-0.2
4,789,915	+		Psyr_4022	0.44	-0.7
4,789,915	+		Psyr_4022	0.44	+0.5
4,789,915	+		Psyr_4022	0.44	-0.1
4,789,915	+		Psyr_4022	0.44	+1.0
4,789,915	+		Psyr_4022	0.44	-0.5
4,789,915	+		Psyr_4022	0.44	+0.3
4,789,916	-		Psyr_4022	0.44	-0.7
4,789,916	-		Psyr_4022	0.44	+0.4
4,789,916	-		Psyr_4022	0.44	-2.0
4,789,916	-		Psyr_4022	0.44	-0.2
4,789,916	-		Psyr_4022	0.44	+0.6
4,789,916	-		Psyr_4022	0.44	-0.2
4,789,916	-		Psyr_4022	0.44	-3.0
4,789,916	-		Psyr_4022	0.44	-0.2
4,789,916	-		Psyr_4022	0.44	-1.0
4,789,916	-		Psyr_4022	0.44	+1.2
4,789,916	-		Psyr_4022	0.44	-0.0
4,789,916	-		Psyr_4022	0.44	-1.0
4,789,916	-		Psyr_4022	0.44	-1.3
4,789,990	+		Psyr_4022	0.52	-0.5
4,789,990	+		Psyr_4022	0.52	-2.3
4,789,990	+		Psyr_4022	0.52	+0.5
4,789,990	+		Psyr_4022	0.52	-0.9
4,789,990	+		Psyr_4022	0.52	+0.8
4,789,990	+		Psyr_4022	0.52	+0.8
4,789,990	+		Psyr_4022	0.52	-3.8
4,789,990	+		Psyr_4022	0.52	-0.8
4,789,990	+		Psyr_4022	0.52	+0.5
4,789,990	+		Psyr_4022	0.52	-2.0
4,789,990	+		Psyr_4022	0.52	-0.6
4,789,991	-		Psyr_4022	0.52	+0.1
4,789,991	-		Psyr_4022	0.52	-1.1
4,789,991	-		Psyr_4022	0.52	-0.5
4,789,991	-		Psyr_4022	0.52	+0.3
4,789,991	-		Psyr_4022	0.52	+0.5
4,789,991	-		Psyr_4022	0.52	-1.4
4,790,027	-		Psyr_4022	0.56	-0.2
4,790,027	-		Psyr_4022	0.56	+1.1
4,790,027	-		Psyr_4022	0.56	+0.2
4,790,027	-		Psyr_4022	0.56	-0.1
4,790,381	-				-1.3
4,790,381	-				+0.3
4,790,419	+				-2.1
4,790,420	-				+0.7
4,790,439	+				-1.2
4,790,439	+				+1.7
4,790,439	+				-1.8
4,790,439	+				-1.5
4,790,439	+				+1.2
4,790,439	+				-1.0
4,790,439	+				-1.8
4,790,439	+				+0.3
4,790,440	-				-0.8
4,790,440	-				+0.1
4,790,440	-				-0.5
4,790,440	-				-1.3
4,790,440	-				-0.7
4,790,440	-				-0.8
4,790,440	-				-2.5
4,790,514	+				-0.3
4,790,515	-				+1.0
4,790,927	+		Psyr_4023	0.30	-0.5
4,790,928	-		Psyr_4023	0.30	+0.5
4,790,960	+		Psyr_4023	0.32	+1.1
4,790,961	-		Psyr_4023	0.32	+0.3
4,790,961	-		Psyr_4023	0.32	-1.3
4,790,961	-		Psyr_4023	0.32	-0.5
4,791,062	+		Psyr_4023	0.39	+0.3
4,791,062	+		Psyr_4023	0.39	-0.5
4,791,062	+		Psyr_4023	0.39	-1.0
4,791,062	+		Psyr_4023	0.39	-0.2
4,791,062	+		Psyr_4023	0.39	+1.5
4,791,062	+		Psyr_4023	0.39	-0.8
4,791,062	+		Psyr_4023	0.39	-1.8
4,791,063	-		Psyr_4023	0.39	-0.5
4,791,063	-		Psyr_4023	0.39	+0.8
4,791,063	-		Psyr_4023	0.39	+0.3
4,791,063	-		Psyr_4023	0.39	+0.6
4,791,063	-		Psyr_4023	0.39	+0.6
4,791,078	+		Psyr_4023	0.40	-1.0
4,791,078	+		Psyr_4023	0.40	-0.7
4,791,079	-		Psyr_4023	0.40	-2.8
4,791,093	+		Psyr_4023	0.41	+0.4
4,791,093	+		Psyr_4023	0.41	-2.0
4,791,093	+		Psyr_4023	0.41	-1.5
4,791,093	+		Psyr_4023	0.41	+0.6
4,791,093	+		Psyr_4023	0.41	+4.6
4,791,093	+		Psyr_4023	0.41	-1.5
4,791,093	+		Psyr_4023	0.41	-0.3
4,791,093	+		Psyr_4023	0.41	+1.0
4,791,093	+		Psyr_4023	0.41	-0.8
4,791,093	+		Psyr_4023	0.41	+0.9
4,791,093	+		Psyr_4023	0.41	+0.2
4,791,093	+		Psyr_4023	0.41	+0.2
4,791,093	+		Psyr_4023	0.41	+1.5
4,791,093	+		Psyr_4023	0.41	-1.1
4,791,093	+		Psyr_4023	0.41	+1.0
4,791,093	+		Psyr_4023	0.41	-0.7
4,791,093	+		Psyr_4023	0.41	+0.9
4,791,094	-		Psyr_4023	0.41	+0.7
4,791,094	-		Psyr_4023	0.41	-0.5
4,791,094	-		Psyr_4023	0.41	+0.6
4,791,094	-		Psyr_4023	0.41	+0.4
4,791,094	-		Psyr_4023	0.41	-0.4
4,791,094	-		Psyr_4023	0.41	+0.7
4,791,094	-		Psyr_4023	0.41	-0.0
4,791,094	-		Psyr_4023	0.41	+0.8
4,791,094	-		Psyr_4023	0.41	+0.9
4,791,094	-		Psyr_4023	0.41	-1.1
4,791,094	-		Psyr_4023	0.41	+0.0
4,791,094	-		Psyr_4023	0.41	+0.7
4,791,095	+		Psyr_4023	0.41	+0.0
4,791,095	+		Psyr_4023	0.41	+1.3
4,791,095	+		Psyr_4023	0.41	+1.3
4,791,095	+		Psyr_4023	0.41	-0.3
4,791,095	+		Psyr_4023	0.41	-0.7
4,791,095	+		Psyr_4023	0.41	+0.6
4,791,095	+		Psyr_4023	0.41	+0.5
4,791,095	+		Psyr_4023	0.41	+1.0
4,791,095	+		Psyr_4023	0.41	+0.6
4,791,095	+		Psyr_4023	0.41	-1.2
4,791,095	+		Psyr_4023	0.41	+0.1
4,791,095	+		Psyr_4023	0.41	+1.5
4,791,095	+		Psyr_4023	0.41	-0.1
4,791,095	+		Psyr_4023	0.41	-1.1
4,791,095	+		Psyr_4023	0.41	+0.0
4,791,096	-		Psyr_4023	0.41	-3.3
4,791,096	-		Psyr_4023	0.41	+1.0
4,791,096	-		Psyr_4023	0.41	+1.2
4,791,096	-		Psyr_4023	0.41	+0.0
4,791,096	-		Psyr_4023	0.41	-0.4
4,791,096	-		Psyr_4023	0.41	+1.0
4,791,096	-		Psyr_4023	0.41	+0.1
4,791,096	-		Psyr_4023	0.41	+0.2
4,791,096	-		Psyr_4023	0.41	-0.5
4,791,096	-		Psyr_4023	0.41	-0.0
4,791,096	-		Psyr_4023	0.41	+0.2
4,791,096	-		Psyr_4023	0.41	+0.4
4,791,120	-		Psyr_4023	0.42	+0.3
4,791,120	-		Psyr_4023	0.42	+0.1
4,791,120	-		Psyr_4023	0.42	-1.4
4,791,156	+		Psyr_4023	0.45	-0.6
4,791,156	+		Psyr_4023	0.45	-0.4
4,791,156	+		Psyr_4023	0.45	-0.6
4,791,156	+		Psyr_4023	0.45	+0.4
4,791,156	+		Psyr_4023	0.45	-0.5
4,791,156	+		Psyr_4023	0.45	+0.3
4,791,156	+		Psyr_4023	0.45	+0.6
4,791,156	+		Psyr_4023	0.45	+0.6
4,791,156	+		Psyr_4023	0.45	-0.5
4,791,156	+		Psyr_4023	0.45	-0.1
4,791,157	-		Psyr_4023	0.45	-1.1
4,791,157	-		Psyr_4023	0.45	-1.1
4,791,157	-		Psyr_4023	0.45	+0.2
4,791,157	-		Psyr_4023	0.45	+0.3
4,791,157	-		Psyr_4023	0.45	+0.8
4,791,157	-		Psyr_4023	0.45	-1.8
4,791,157	-		Psyr_4023	0.45	-0.8
4,791,157	-		Psyr_4023	0.45	+1.8
4,791,157	-		Psyr_4023	0.45	+0.5
4,791,204	-		Psyr_4023	0.48	-2.2
4,791,210	+		Psyr_4023	0.48	-1.1
4,791,232	-		Psyr_4023	0.49	-1.3
4,791,232	-		Psyr_4023	0.49	+1.9
4,791,232	-		Psyr_4023	0.49	+1.3
4,791,276	-		Psyr_4023	0.52	+0.9
4,791,567	+		Psyr_4023	0.70	-1.9
4,791,567	+		Psyr_4023	0.70	-2.0
4,791,567	+		Psyr_4023	0.70	+1.1
4,791,567	+		Psyr_4023	0.70	+1.3
4,791,567	+		Psyr_4023	0.70	-1.1
4,791,568	-		Psyr_4023	0.71	-1.8
4,791,568	-		Psyr_4023	0.71	+0.2
4,791,568	-		Psyr_4023	0.71	+0.2
4,791,568	-		Psyr_4023	0.71	+0.6
4,791,868	-		Psyr_4023	0.89	+1.0
4,792,438	+		Psyr_4024	0.33	+0.1
4,792,438	+		Psyr_4024	0.33	-0.3
4,792,438	+		Psyr_4024	0.33	-0.8
4,792,439	-		Psyr_4024	0.33	+1.3
4,792,538	+		Psyr_4024	0.41	+0.2
4,792,539	-		Psyr_4024	0.42	+0.0
4,792,539	-		Psyr_4024	0.42	+0.3
4,792,591	+		Psyr_4024	0.46	+0.3
4,792,591	+		Psyr_4024	0.46	+0.1
4,792,591	+		Psyr_4024	0.46	-0.0
4,792,591	+		Psyr_4024	0.46	-1.5
4,792,591	+		Psyr_4024	0.46	+0.1
4,792,592	-		Psyr_4024	0.46	-2.3
4,792,592	-		Psyr_4024	0.46	+1.2
4,792,592	-		Psyr_4024	0.46	+1.2
4,792,685	+		Psyr_4024	0.54	+0.7
4,792,756	+		Psyr_4024	0.59	-3.2
4,792,757	-		Psyr_4024	0.59	+0.8
4,792,858	+		Psyr_4024	0.68	-0.7