Experiment: Methyl alpha-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2626 and Echvi_2627 are separated by 837 nucleotides Echvi_2627 and Echvi_2628 overlap by 8 nucleotides
Echvi_2626: Echvi_2626 - Predicted membrane protein, at 3,113,233 to 3,114,027
_2626
Echvi_2627: Echvi_2627 - hypothetical protein, at 3,114,865 to 3,115,101
_2627
Echvi_2628: Echvi_2628 - NhaP-type Na+/H+ and K+/H+ antiporters with a unique C-terminal domain, at 3,115,094 to 3,116,557
_2628
Position (kb)
3114
3115
3116 Strain fitness (log2 ratio)
-2
-1
0
1 at 3113.873 kb on - strand, within Echvi_2626 at 3113.875 kb on - strand, within Echvi_2626 at 3113.875 kb on - strand, within Echvi_2626 at 3113.914 kb on + strand, within Echvi_2626 at 3113.929 kb on + strand, within Echvi_2626 at 3113.930 kb on - strand, within Echvi_2626 at 3113.930 kb on - strand, within Echvi_2626 at 3113.932 kb on + strand, within Echvi_2626 at 3113.977 kb on + strand at 3113.983 kb on + strand at 3113.985 kb on + strand at 3113.985 kb on + strand at 3113.986 kb on - strand at 3113.986 kb on - strand at 3113.986 kb on - strand at 3113.987 kb on + strand at 3113.987 kb on + strand at 3113.987 kb on + strand at 3113.987 kb on + strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3113.988 kb on - strand at 3114.001 kb on - strand at 3114.031 kb on + strand at 3114.032 kb on - strand at 3114.032 kb on - strand at 3114.059 kb on + strand at 3114.079 kb on + strand at 3114.080 kb on - strand at 3114.084 kb on + strand at 3114.085 kb on - strand at 3114.157 kb on + strand at 3114.157 kb on + strand at 3114.214 kb on + strand at 3114.229 kb on + strand at 3114.229 kb on + strand at 3114.276 kb on - strand at 3114.351 kb on - strand at 3114.351 kb on - strand at 3114.355 kb on - strand at 3114.355 kb on - strand at 3114.413 kb on + strand at 3114.413 kb on + strand at 3114.448 kb on - strand at 3114.453 kb on - strand at 3114.539 kb on - strand at 3114.595 kb on + strand at 3114.595 kb on + strand at 3114.595 kb on + strand at 3114.595 kb on + strand at 3114.596 kb on - strand at 3114.596 kb on - strand at 3114.596 kb on - strand at 3114.603 kb on - strand at 3114.603 kb on - strand at 3114.709 kb on + strand at 3114.798 kb on + strand at 3114.798 kb on + strand at 3114.799 kb on - strand at 3114.820 kb on + strand at 3114.820 kb on + strand at 3114.820 kb on + strand at 3114.821 kb on - strand at 3114.826 kb on + strand at 3114.846 kb on - strand at 3114.856 kb on - strand at 3114.856 kb on - strand at 3114.944 kb on + strand, within Echvi_2627 at 3114.944 kb on + strand, within Echvi_2627 at 3114.944 kb on + strand, within Echvi_2627 at 3114.945 kb on - strand, within Echvi_2627 at 3114.945 kb on - strand, within Echvi_2627 at 3114.945 kb on - strand, within Echvi_2627 at 3114.945 kb on - strand, within Echvi_2627 at 3115.010 kb on + strand, within Echvi_2627 at 3115.010 kb on + strand, within Echvi_2627 at 3115.011 kb on - strand, within Echvi_2627 at 3115.011 kb on - strand, within Echvi_2627 at 3115.096 kb on - strand at 3115.222 kb on + strand at 3115.223 kb on - strand at 3115.223 kb on - strand at 3115.226 kb on + strand at 3115.227 kb on - strand at 3115.307 kb on + strand, within Echvi_2628 at 3115.308 kb on - strand, within Echvi_2628 at 3115.404 kb on - strand, within Echvi_2628 at 3115.404 kb on - strand, within Echvi_2628 at 3115.448 kb on - strand, within Echvi_2628 at 3115.455 kb on - strand, within Echvi_2628 at 3115.772 kb on + strand, within Echvi_2628 at 3115.773 kb on - strand, within Echvi_2628 at 3115.804 kb on + strand, within Echvi_2628 at 3115.804 kb on + strand, within Echvi_2628 at 3115.804 kb on + strand, within Echvi_2628 at 3115.804 kb on + strand, within Echvi_2628 at 3115.804 kb on + strand, within Echvi_2628 at 3115.805 kb on - strand, within Echvi_2628 at 3115.805 kb on - strand, within Echvi_2628 at 3115.805 kb on - strand, within Echvi_2628 at 3115.806 kb on + strand, within Echvi_2628 at 3115.806 kb on + strand, within Echvi_2628 at 3115.807 kb on - strand, within Echvi_2628 at 3115.807 kb on - strand, within Echvi_2628 at 3115.849 kb on + strand, within Echvi_2628 at 3115.850 kb on - strand, within Echvi_2628 at 3115.850 kb on - strand, within Echvi_2628 at 3115.850 kb on - strand, within Echvi_2628 at 3115.851 kb on + strand, within Echvi_2628 at 3115.887 kb on + strand, within Echvi_2628 at 3116.021 kb on + strand, within Echvi_2628 at 3116.050 kb on + strand, within Echvi_2628 at 3116.050 kb on + strand, within Echvi_2628 at 3116.058 kb on + strand, within Echvi_2628 at 3116.074 kb on + strand, within Echvi_2628 at 3116.075 kb on - strand, within Echvi_2628 at 3116.075 kb on - strand, within Echvi_2628
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl alpha-D-glucopyranoside (C) remove 3,113,873 - Echvi_2626 0.81 +0.3 3,113,875 - Echvi_2626 0.81 -0.0 3,113,875 - Echvi_2626 0.81 -0.1 3,113,914 + Echvi_2626 0.86 -1.4 3,113,929 + Echvi_2626 0.88 -2.7 3,113,930 - Echvi_2626 0.88 +0.7 3,113,930 - Echvi_2626 0.88 +0.9 3,113,932 + Echvi_2626 0.88 +0.0 3,113,977 + -0.2 3,113,983 + -0.3 3,113,985 + +0.2 3,113,985 + -0.9 3,113,986 - -0.3 3,113,986 - -0.6 3,113,986 - +0.3 3,113,987 + -0.0 3,113,987 + +0.4 3,113,987 + +0.5 3,113,987 + +0.2 3,113,988 - -0.1 3,113,988 - +0.1 3,113,988 - +0.8 3,113,988 - -0.2 3,113,988 - -0.5 3,113,988 - -0.1 3,113,988 - -0.5 3,113,988 - -0.2 3,113,988 - -0.3 3,114,001 - -1.2 3,114,031 + -0.7 3,114,032 - -0.1 3,114,032 - -0.5 3,114,059 + -0.3 3,114,079 + +0.1 3,114,080 - +0.5 3,114,084 + +0.1 3,114,085 - -0.3 3,114,157 + +0.7 3,114,157 + -0.9 3,114,214 + -0.7 3,114,229 + +0.0 3,114,229 + +0.4 3,114,276 - +0.8 3,114,351 - -0.5 3,114,351 - -0.0 3,114,355 - +0.9 3,114,355 - +0.5 3,114,413 + -0.6 3,114,413 + -1.0 3,114,448 - -0.7 3,114,453 - +0.3 3,114,539 - -0.3 3,114,595 + +0.4 3,114,595 + -1.3 3,114,595 + -0.2 3,114,595 + +0.3 3,114,596 - +0.0 3,114,596 - -0.6 3,114,596 - +1.3 3,114,603 - +0.1 3,114,603 - +0.9 3,114,709 + -0.1 3,114,798 + +0.4 3,114,798 + +0.2 3,114,799 - -1.5 3,114,820 + +1.4 3,114,820 + -0.5 3,114,820 + -0.2 3,114,821 - +0.1 3,114,826 + +1.2 3,114,846 - -0.1 3,114,856 - +1.1 3,114,856 - -0.3 3,114,944 + Echvi_2627 0.33 +1.1 3,114,944 + Echvi_2627 0.33 -0.4 3,114,944 + Echvi_2627 0.33 -0.0 3,114,945 - Echvi_2627 0.34 -1.6 3,114,945 - Echvi_2627 0.34 -2.1 3,114,945 - Echvi_2627 0.34 -0.5 3,114,945 - Echvi_2627 0.34 -1.0 3,115,010 + Echvi_2627 0.61 +1.7 3,115,010 + Echvi_2627 0.61 +0.1 3,115,011 - Echvi_2627 0.62 -0.3 3,115,011 - Echvi_2627 0.62 -1.3 3,115,096 - -0.1 3,115,222 + +0.3 3,115,223 - +0.6 3,115,223 - -0.8 3,115,226 + +0.7 3,115,227 - +0.7 3,115,307 + Echvi_2628 0.15 -0.5 3,115,308 - Echvi_2628 0.15 -0.8 3,115,404 - Echvi_2628 0.21 +0.4 3,115,404 - Echvi_2628 0.21 -0.1 3,115,448 - Echvi_2628 0.24 +0.1 3,115,455 - Echvi_2628 0.25 -0.0 3,115,772 + Echvi_2628 0.46 -0.0 3,115,773 - Echvi_2628 0.46 -0.2 3,115,804 + Echvi_2628 0.48 -0.5 3,115,804 + Echvi_2628 0.48 -0.0 3,115,804 + Echvi_2628 0.48 +0.1 3,115,804 + Echvi_2628 0.48 -0.7 3,115,804 + Echvi_2628 0.48 +0.1 3,115,805 - Echvi_2628 0.49 +0.2 3,115,805 - Echvi_2628 0.49 +0.7 3,115,805 - Echvi_2628 0.49 -0.9 3,115,806 + Echvi_2628 0.49 +0.0 3,115,806 + Echvi_2628 0.49 -0.6 3,115,807 - Echvi_2628 0.49 +0.4 3,115,807 - Echvi_2628 0.49 +0.1 3,115,849 + Echvi_2628 0.52 +0.1 3,115,850 - Echvi_2628 0.52 +1.4 3,115,850 - Echvi_2628 0.52 -1.7 3,115,850 - Echvi_2628 0.52 -0.1 3,115,851 + Echvi_2628 0.52 +0.6 3,115,887 + Echvi_2628 0.54 +0.1 3,116,021 + Echvi_2628 0.63 -0.0 3,116,050 + Echvi_2628 0.65 -0.2 3,116,050 + Echvi_2628 0.65 -2.0 3,116,058 + Echvi_2628 0.66 -0.4 3,116,074 + Echvi_2628 0.67 -0.4 3,116,075 - Echvi_2628 0.67 -1.3 3,116,075 - Echvi_2628 0.67 -0.1
Or see this region's nucleotide sequence