Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3789

Experiment: D-Glucose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C)
4,520,218	+				+0.3
4,520,218	+				+0.0
4,520,219	-				+0.1
4,520,219	-				+0.3
4,520,219	-				-0.6
4,520,220	+				+0.6
4,520,220	+				+0.7
4,520,221	-				-0.6
4,520,221	-				+1.1
4,520,278	-				-1.6
4,520,352	+				-0.1
4,520,364	+				-0.1
4,520,364	+				+0.3
4,520,364	+				+0.6
4,520,560	+		Echvi_3788	0.27	+0.3
4,520,560	+		Echvi_3788	0.27	+0.2
4,520,561	-		Echvi_3788	0.27	+0.2
4,520,597	-		Echvi_3788	0.31	-0.8
4,520,674	-		Echvi_3788	0.40	-2.7
4,520,674	-		Echvi_3788	0.40	-0.0
4,520,764	+		Echvi_3788	0.50	-0.4
4,520,764	+		Echvi_3788	0.50	+0.3
4,520,765	-		Echvi_3788	0.50	+1.3
4,520,786	-		Echvi_3788	0.52	+0.1
4,520,786	-		Echvi_3788	0.52	-0.4
4,520,786	-		Echvi_3788	0.52	-0.3
4,520,804	+		Echvi_3788	0.55	+1.2
4,520,833	-		Echvi_3788	0.58	+0.3
4,520,883	-		Echvi_3788	0.63	-0.9
4,520,921	+		Echvi_3788	0.68	+0.7
4,520,921	+		Echvi_3788	0.68	-1.3
4,520,958	+		Echvi_3788	0.72	+0.8
4,520,959	-		Echvi_3788	0.72	-1.3
4,520,976	-		Echvi_3788	0.74	-0.3
4,520,998	-		Echvi_3788	0.76	+0.4
4,521,117	-		Echvi_3788	0.90	-0.6
4,521,117	-		Echvi_3788	0.90	-0.1
4,521,117	-		Echvi_3788	0.90	+1.5
4,521,119	+				-0.3
4,521,119	+				-1.5
4,521,119	+				+1.3
4,521,119	+				+0.0
4,521,119	+				+0.0
4,521,120	-				-0.2
4,521,120	-				-1.0
4,521,120	-				-0.3
4,521,120	-				-0.9
4,521,120	-				-0.3
4,521,120	-				+0.5
4,521,120	-				-0.9
4,521,120	-				+0.0
4,521,120	-				-1.1
4,521,173	-				-0.8
4,521,215	+				+0.6
4,521,276	+				+0.1
4,521,276	+				-0.4
4,521,277	-				-1.6
4,521,277	-				+0.7
4,521,280	+				-1.0
4,521,280	+				+0.3
4,521,287	+				-0.4
4,521,291	-				-0.2
4,521,458	-		Echvi_3789	0.17	-0.3
4,521,458	-		Echvi_3789	0.17	-0.7
4,521,459	+		Echvi_3789	0.17	-1.3
4,521,460	-		Echvi_3789	0.17	-0.9
4,521,460	-		Echvi_3789	0.17	+0.2
4,521,461	+		Echvi_3789	0.17	+0.1
4,521,461	+		Echvi_3789	0.17	+0.2
4,521,462	-		Echvi_3789	0.17	-0.4
4,521,620	-		Echvi_3789	0.28	+0.1
4,521,708	+		Echvi_3789	0.34	-0.3
4,521,715	-		Echvi_3789	0.35	-0.4
4,521,764	+		Echvi_3789	0.38	-0.4
4,521,764	+		Echvi_3789	0.38	-0.2
4,521,764	+		Echvi_3789	0.38	-0.0
4,521,764	+		Echvi_3789	0.38	+0.6
4,521,764	+		Echvi_3789	0.38	+0.2
4,521,765	-		Echvi_3789	0.38	-0.6
4,521,765	-		Echvi_3789	0.38	+0.6
4,521,765	-		Echvi_3789	0.38	-0.5
4,521,765	-		Echvi_3789	0.38	-2.8
4,521,771	-		Echvi_3789	0.39	-0.3
4,521,799	-		Echvi_3789	0.41	-1.0
4,521,926	+		Echvi_3789	0.49	-0.3
4,521,977	+		Echvi_3789	0.53	+0.0
4,521,977	+		Echvi_3789	0.53	-0.2
4,521,987	-		Echvi_3789	0.54	-0.1
4,522,000	-		Echvi_3789	0.54	-1.2
4,522,000	-		Echvi_3789	0.54	-0.8
4,522,024	-		Echvi_3789	0.56	-0.8
4,522,090	-		Echvi_3789	0.61	+0.5
4,522,090	-		Echvi_3789	0.61	-0.2
4,522,090	-		Echvi_3789	0.61	-0.2
4,522,092	-		Echvi_3789	0.61	+0.7
4,522,092	-		Echvi_3789	0.61	+0.2
4,522,092	-		Echvi_3789	0.61	+0.3
4,522,092	-		Echvi_3789	0.61	+0.8
4,522,092	-		Echvi_3789	0.61	+0.1
4,522,185	+		Echvi_3789	0.67	+0.5
4,522,186	-		Echvi_3789	0.67	+0.1
4,522,195	+		Echvi_3789	0.68	-0.1
4,522,230	-		Echvi_3789	0.70	+1.1
4,522,230	-		Echvi_3789	0.70	+0.1
4,522,365	+		Echvi_3789	0.80	+0.3
4,522,367	+		Echvi_3789	0.80	+0.1
4,522,368	-		Echvi_3789	0.80	-0.1
4,522,370	+		Echvi_3789	0.80	+0.3
4,522,374	+		Echvi_3789	0.80	+0.2
4,522,393	+		Echvi_3789	0.82	-0.1
4,522,394	-		Echvi_3789	0.82	-0.1
4,522,411	-		Echvi_3789	0.83	-0.4
4,522,475	+		Echvi_3789	0.87	-0.5
4,522,533	-				+0.3
4,522,601	+				+0.7
4,522,675	+				-1.0
4,522,675	+				+0.2
4,522,759	-				+0.1
4,522,770	+				+0.9
4,522,770	+				+0.2
4,522,830	+				-2.0
4,522,830	+				-2.3
4,522,830	+				-0.4
4,522,831	-				-1.0
4,522,865	-		Echvi_3790	0.12	-0.6
4,522,887	+		Echvi_3790	0.15	-0.2
4,522,950	+		Echvi_3790	0.23	-1.2
4,522,950	+		Echvi_3790	0.23	-0.2
4,522,951	-		Echvi_3790	0.24	+1.9
4,522,951	-		Echvi_3790	0.24	-0.7
4,522,951	-		Echvi_3790	0.24	-0.7
4,522,955	+		Echvi_3790	0.24	+0.8
4,522,956	-		Echvi_3790	0.24	+0.7
4,522,956	-		Echvi_3790	0.24	+1.7
4,523,051	-		Echvi_3790	0.37	+0.2
4,523,056	+		Echvi_3790	0.37	-0.8
4,523,067	+		Echvi_3790	0.39	-0.4
4,523,068	-		Echvi_3790	0.39	-0.3
4,523,128	-		Echvi_3790	0.47	-1.6
4,523,139	+		Echvi_3790	0.48	+0.0
4,523,267	+		Echvi_3790	0.65	-0.2
4,523,402	-		Echvi_3790	0.82	+0.2
4,523,407	-		Echvi_3790	0.83	+0.6
4,523,407	-		Echvi_3790	0.83	+0.9
4,523,410	+		Echvi_3790	0.83	+2.2
4,523,410	+		Echvi_3790	0.83	+0.6
4,523,410	+		Echvi_3790	0.83	+0.5
4,523,411	-		Echvi_3790	0.83	-0.1
4,523,411	-		Echvi_3790	0.83	+0.1
4,523,411	-		Echvi_3790	0.83	+0.1
4,523,412	+		Echvi_3790	0.83	-0.1
4,523,413	-		Echvi_3790	0.84	-0.5
4,523,413	-		Echvi_3790	0.84	-1.1
4,523,413	-		Echvi_3790	0.84	+0.4
4,523,435	+		Echvi_3790	0.86	-0.1
4,523,436	-		Echvi_3790	0.87	+0.0
4,523,443	+		Echvi_3790	0.87	+0.2
4,523,500	+				+2.4
4,523,500	+				-0.1
4,523,501	-				+0.3
4,523,501	-				+0.0
4,523,530	+				-0.1
4,523,533	-				+0.3
4,523,582	+				+1.3