Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4343

Experiment: Xylobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylobiose (C)
5,193,735	-		Echvi_4342	0.65	+0.4
5,193,736	+		Echvi_4342	0.65	+0.6
5,193,817	+		Echvi_4342	0.68	+0.6
5,193,818	-		Echvi_4342	0.68	-0.3
5,193,869	+		Echvi_4342	0.70	+0.0
5,193,870	-		Echvi_4342	0.70	+0.8
5,193,895	-		Echvi_4342	0.71	+1.6
5,193,895	-		Echvi_4342	0.71	-1.4
5,193,934	+		Echvi_4342	0.72	+0.3
5,193,940	+		Echvi_4342	0.72	+0.6
5,193,940	+		Echvi_4342	0.72	+0.5
5,193,952	+		Echvi_4342	0.73	-0.1
5,193,953	-		Echvi_4342	0.73	+0.2
5,193,953	-		Echvi_4342	0.73	-0.2
5,193,963	+		Echvi_4342	0.73	+1.4
5,194,173	+		Echvi_4342	0.81	+0.8
5,194,174	-		Echvi_4342	0.81	-0.5
5,194,174	-		Echvi_4342	0.81	-0.3
5,194,222	+		Echvi_4342	0.83	-0.2
5,194,227	+		Echvi_4342	0.83	-0.2
5,194,242	+		Echvi_4342	0.83	+0.9
5,194,264	-		Echvi_4342	0.84	+1.7
5,194,421	-				-1.9
5,194,659	+				+0.3
5,194,671	-				+0.2
5,194,674	-				-0.3
5,194,675	+				-1.0
5,194,675	+				+1.2
5,194,675	+				+0.4
5,194,675	+				+0.6
5,194,675	+				-0.0
5,194,675	+				+0.6
5,194,675	+				-0.3
5,194,676	-				+0.0
5,194,676	-				+0.1
5,194,676	-				+1.2
5,194,676	-				+0.2
5,194,676	-				+0.4
5,194,676	-				+0.2
5,194,680	+				+0.1
5,194,680	+				-0.9
5,194,680	+				-0.2
5,194,680	+				-0.5
5,194,682	+				+0.8
5,194,682	+				+0.7
5,194,682	+				+0.3
5,194,682	+				+0.4
5,194,682	+				+1.1
5,194,683	-				+0.8
5,194,683	-				-0.2
5,194,719	+				+0.1
5,194,719	+				+0.0
5,194,719	+				-0.7
5,194,719	+				-0.7
5,194,719	+				-0.2
5,194,719	+				+0.6
5,194,750	-				+1.0
5,194,752	+				+0.2
5,194,753	-				+1.2
5,194,753	-				+0.4
5,194,755	+				+0.7
5,194,755	+				+1.1
5,194,756	-				-0.3
5,194,756	-				-1.5
5,194,757	+				+0.2
5,194,758	-				+1.5
5,194,803	-				-0.1
5,194,803	-				+0.5
5,194,898	+		Echvi_4343	0.18	+0.4
5,194,898	+		Echvi_4343	0.18	-1.0
5,194,899	-		Echvi_4343	0.18	-0.5
5,195,009	+		Echvi_4343	0.30	-0.1
5,195,010	-		Echvi_4343	0.30	+0.3
5,195,013	+		Echvi_4343	0.31	+0.5
5,195,013	+		Echvi_4343	0.31	-0.7
5,195,013	+		Echvi_4343	0.31	+2.4
5,195,014	-		Echvi_4343	0.31	+0.4
5,195,014	-		Echvi_4343	0.31	+0.2
5,195,014	-		Echvi_4343	0.31	-0.8
5,195,015	+		Echvi_4343	0.31	+0.4
5,195,015	+		Echvi_4343	0.31	+0.1
5,195,016	-		Echvi_4343	0.31	-0.2
5,195,016	-		Echvi_4343	0.31	-1.7
5,195,016	-		Echvi_4343	0.31	+0.7
5,195,016	-		Echvi_4343	0.31	+2.0
5,195,093	+		Echvi_4343	0.39	-1.7
5,195,093	+		Echvi_4343	0.39	+0.5
5,195,094	-		Echvi_4343	0.39	-0.4
5,195,125	-		Echvi_4343	0.43	-1.2
5,195,142	+		Echvi_4343	0.44	+0.3
5,195,150	+		Echvi_4343	0.45	+0.8
5,195,151	-		Echvi_4343	0.45	+0.1
5,195,185	+		Echvi_4343	0.49	-0.6
5,195,185	+		Echvi_4343	0.49	-1.1
5,195,185	+		Echvi_4343	0.49	+0.5
5,195,186	-		Echvi_4343	0.49	-0.2
5,195,219	-		Echvi_4343	0.53	+0.2
5,195,244	-		Echvi_4343	0.55	+0.0
5,195,291	+		Echvi_4343	0.60	+0.2
5,195,291	+		Echvi_4343	0.60	+0.4
5,195,291	+		Echvi_4343	0.60	+0.6
5,195,296	+		Echvi_4343	0.61	+0.5
5,195,327	+		Echvi_4343	0.64	+0.8
5,195,327	+		Echvi_4343	0.64	+0.8
5,195,327	+		Echvi_4343	0.64	-0.4
5,195,328	-		Echvi_4343	0.64	+0.5
5,195,328	-		Echvi_4343	0.64	+1.5
5,195,328	-		Echvi_4343	0.64	-0.0
5,195,330	+		Echvi_4343	0.65	+0.1
5,195,330	+		Echvi_4343	0.65	+0.1
5,195,331	-		Echvi_4343	0.65	-0.9
5,195,428	+		Echvi_4343	0.75	+0.3
5,195,429	-		Echvi_4343	0.75	+0.8
5,195,489	+		Echvi_4343	0.82	+0.1
5,195,490	-		Echvi_4343	0.82	+0.5
5,195,541	+		Echvi_4343	0.87	-1.5
5,195,542	-		Echvi_4343	0.87	+0.3
5,195,542	-		Echvi_4343	0.87	-0.3
5,195,665	+				-1.7
5,195,759	+				-0.2
5,195,788	+				+0.6
5,195,788	+				-0.2
5,195,788	+				-1.1
5,195,789	-				+1.0
5,195,875	+		Echvi_4344	0.11	+0.2
5,195,876	-		Echvi_4344	0.11	-0.1
5,196,059	-		Echvi_4344	0.23	-0.1
5,196,064	+		Echvi_4344	0.24	+0.1
5,196,064	+		Echvi_4344	0.24	+0.8
5,196,065	-		Echvi_4344	0.24	-0.5
5,196,069	+		Echvi_4344	0.24	-1.3
5,196,069	+		Echvi_4344	0.24	-1.0
5,196,105	+		Echvi_4344	0.27	+0.3
5,196,105	+		Echvi_4344	0.27	-1.7
5,196,105	+		Echvi_4344	0.27	+0.2
5,196,105	+		Echvi_4344	0.27	-0.3
5,196,106	-		Echvi_4344	0.27	+0.4
5,196,106	-		Echvi_4344	0.27	-0.1
5,196,109	+		Echvi_4344	0.27	-2.0
5,196,109	+		Echvi_4344	0.27	-0.6
5,196,126	+		Echvi_4344	0.28	+0.2
5,196,129	+		Echvi_4344	0.28	+1.3
5,196,129	+		Echvi_4344	0.28	-0.8
5,196,129	+		Echvi_4344	0.28	+1.2
5,196,129	+		Echvi_4344	0.28	-0.2
5,196,129	+		Echvi_4344	0.28	+1.1
5,196,130	-		Echvi_4344	0.28	-1.5
5,196,130	-		Echvi_4344	0.28	-1.2
5,196,130	-		Echvi_4344	0.28	+1.1
5,196,130	-		Echvi_4344	0.28	-1.1
5,196,130	-		Echvi_4344	0.28	+0.5
5,196,130	-		Echvi_4344	0.28	+0.2
5,196,130	-		Echvi_4344	0.28	-0.3
5,196,130	-		Echvi_4344	0.28	-2.1
5,196,131	+		Echvi_4344	0.28	+1.6
5,196,139	+		Echvi_4344	0.29	+0.6
5,196,140	-		Echvi_4344	0.29	+0.8
5,196,140	-		Echvi_4344	0.29	+0.8
5,196,140	-		Echvi_4344	0.29	-0.9
5,196,180	-		Echvi_4344	0.32	-1.1
5,196,251	+		Echvi_4344	0.36	+0.3
5,196,273	+		Echvi_4344	0.38	+1.0
5,196,286	-		Echvi_4344	0.39	+0.3
5,196,329	-		Echvi_4344	0.41	+0.7
5,196,329	-		Echvi_4344	0.41	+2.5
5,196,329	-		Echvi_4344	0.41	+1.3
5,196,344	-		Echvi_4344	0.43	-0.9
5,196,344	-		Echvi_4344	0.43	+0.9
5,196,344	-		Echvi_4344	0.43	-0.9
5,196,347	+		Echvi_4344	0.43	-0.3
5,196,348	-		Echvi_4344	0.43	-1.0
5,196,422	+		Echvi_4344	0.48	-0.6
5,196,504	-		Echvi_4344	0.53	+0.2
5,196,535	+		Echvi_4344	0.55	-0.7
5,196,535	+		Echvi_4344	0.55	+0.2
5,196,629	+		Echvi_4344	0.62	-0.2
5,196,629	+		Echvi_4344	0.62	+0.2
5,196,630	-		Echvi_4344	0.62	+0.0