Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4341

Experiment: Xylobiose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Xylobiose (C)
5,189,408	-		Echvi_4340	0.35	+0.3
5,189,415	+		Echvi_4340	0.35	-1.7
5,189,416	-		Echvi_4340	0.36	+1.1
5,189,416	-		Echvi_4340	0.36	-1.2
5,189,470	-		Echvi_4340	0.39	-0.4
5,189,473	-		Echvi_4340	0.39	+0.3
5,189,473	-		Echvi_4340	0.39	-2.0
5,189,517	-		Echvi_4340	0.42	+0.8
5,189,612	+		Echvi_4340	0.48	+0.5
5,189,612	+		Echvi_4340	0.48	-0.5
5,189,612	+		Echvi_4340	0.48	-2.2
5,189,612	+		Echvi_4340	0.48	-0.6
5,189,613	-		Echvi_4340	0.48	-1.7
5,189,625	+		Echvi_4340	0.49	-1.4
5,189,697	+		Echvi_4340	0.54	+0.3
5,189,698	-		Echvi_4340	0.54	-1.0
5,189,698	-		Echvi_4340	0.54	-0.9
5,189,703	-		Echvi_4340	0.54	-1.0
5,189,703	-		Echvi_4340	0.54	+0.2
5,189,703	-		Echvi_4340	0.54	+1.3
5,189,715	+		Echvi_4340	0.55	+0.8
5,189,716	-		Echvi_4340	0.55	+0.1
5,189,717	+		Echvi_4340	0.55	-0.5
5,189,733	+		Echvi_4340	0.56	-0.6
5,189,749	-		Echvi_4340	0.57	-0.2
5,189,818	+		Echvi_4340	0.62	+1.0
5,189,852	-		Echvi_4340	0.64	-0.3
5,189,859	-		Echvi_4340	0.64	+0.0
5,189,907	-		Echvi_4340	0.68	+1.2
5,189,955	-		Echvi_4340	0.71	+0.3
5,189,955	-		Echvi_4340	0.71	+2.2
5,189,955	-		Echvi_4340	0.71	+0.1
5,190,028	+		Echvi_4340	0.75	-0.4
5,190,028	+		Echvi_4340	0.75	+3.5
5,190,032	+		Echvi_4340	0.76	-0.7
5,190,033	-		Echvi_4340	0.76	-1.4
5,190,156	-		Echvi_4340	0.84	-0.4
5,190,174	+		Echvi_4340	0.85	-0.2
5,190,190	-		Echvi_4340	0.86	-0.5
5,190,389	-				+1.8
5,190,400	-				+0.0
5,190,427	-				+0.3
5,190,534	+				-1.1
5,190,545	+				+0.3
5,190,590	+		Echvi_4341	0.12	+0.5
5,190,590	+		Echvi_4341	0.12	+1.1
5,190,591	-		Echvi_4341	0.12	+0.4
5,190,592	+		Echvi_4341	0.12	-2.0
5,190,668	+		Echvi_4341	0.17	+0.2
5,190,668	+		Echvi_4341	0.17	-0.2
5,190,668	+		Echvi_4341	0.17	-0.9
5,190,753	-		Echvi_4341	0.23	+0.5
5,190,780	-		Echvi_4341	0.25	+0.4
5,190,795	-		Echvi_4341	0.26	+1.0
5,190,825	+		Echvi_4341	0.28	-1.1
5,190,896	-		Echvi_4341	0.32	+1.5
5,190,896	-		Echvi_4341	0.32	-0.9
5,190,910	+		Echvi_4341	0.33	+1.8
5,190,911	-		Echvi_4341	0.33	+0.4
5,190,934	+		Echvi_4341	0.35	-0.0
5,190,956	+		Echvi_4341	0.36	-0.1
5,190,971	+		Echvi_4341	0.37	+1.4
5,191,035	-		Echvi_4341	0.41	+0.7
5,191,177	+		Echvi_4341	0.51	-0.1
5,191,178	-		Echvi_4341	0.51	+0.2
5,191,178	-		Echvi_4341	0.51	+1.9
5,191,184	+		Echvi_4341	0.51	+0.8
5,191,184	+		Echvi_4341	0.51	+0.7
5,191,185	-		Echvi_4341	0.51	-1.9
5,191,187	+		Echvi_4341	0.51	+0.3
5,191,204	-		Echvi_4341	0.53	-0.3
5,191,206	+		Echvi_4341	0.53	+0.5
5,191,206	+		Echvi_4341	0.53	-0.3
5,191,307	+		Echvi_4341	0.59	+1.4
5,191,307	+		Echvi_4341	0.59	-0.6
5,191,332	-		Echvi_4341	0.61	-0.7
5,191,341	+		Echvi_4341	0.61	+1.1
5,191,366	-		Echvi_4341	0.63	-0.1
5,191,366	-		Echvi_4341	0.63	+0.2
5,191,367	+		Echvi_4341	0.63	+1.0
5,191,372	+		Echvi_4341	0.64	-0.5
5,191,372	+		Echvi_4341	0.64	-0.5
5,191,372	+		Echvi_4341	0.64	+0.8
5,191,372	+		Echvi_4341	0.64	-3.4
5,191,373	-		Echvi_4341	0.64	+0.1
5,191,373	-		Echvi_4341	0.64	+0.4
5,191,373	-		Echvi_4341	0.64	-0.8
5,191,421	+		Echvi_4341	0.67	+0.5
5,191,422	-		Echvi_4341	0.67	-0.0
5,191,422	-		Echvi_4341	0.67	+1.2
5,191,422	-		Echvi_4341	0.67	-0.9
5,191,422	-		Echvi_4341	0.67	+2.4
5,191,422	-		Echvi_4341	0.67	+1.0
5,191,455	+		Echvi_4341	0.69	+0.2
5,191,527	+		Echvi_4341	0.74	-0.3
5,191,601	+		Echvi_4341	0.79	+0.0
5,191,660	-		Echvi_4341	0.82	-0.1
5,191,682	+		Echvi_4341	0.84	-0.6
5,191,683	-		Echvi_4341	0.84	+0.0
5,191,712	-		Echvi_4341	0.86	+0.9
5,191,758	+		Echvi_4341	0.89	+0.6
5,191,807	-				+1.2
5,191,858	-				-0.6
5,191,895	+				-0.5
5,191,896	-				-0.8
5,191,896	-				+0.9
5,191,896	-				+1.1
5,191,896	-				-0.5
5,191,896	-				+0.2
5,191,896	-				+1.6
5,191,917	+				+0.1
5,192,063	+				+0.4
5,192,085	+				-0.9
5,192,085	+				+0.1
5,192,085	+				+0.6
5,192,089	+				+0.6
5,192,089	+				+0.1
5,192,089	+				+0.2
5,192,089	+				-0.4
5,192,089	+				+0.0
5,192,089	+				-0.7
5,192,089	+				+1.2
5,192,089	+				-0.1
5,192,090	-				+3.1
5,192,090	-				+0.5
5,192,090	-				+0.4
5,192,090	-				-0.3
5,192,110	-				-0.6
5,192,129	-				-0.3
5,192,130	+				-0.4
5,192,130	+				+0.2
5,192,131	-				-0.5
5,192,131	-				+0.4
5,192,131	-				+0.4
5,192,131	-				+0.7
5,192,155	+				+0.2
5,192,156	-				-0.9
5,192,156	-				-0.3
5,192,190	+				+0.7
5,192,191	-				+0.1
5,192,210	+				-0.2
5,192,277	+		Echvi_4342	0.11	+0.3
5,192,364	+		Echvi_4342	0.14	+0.3
5,192,364	+		Echvi_4342	0.14	+0.2
5,192,394	-		Echvi_4342	0.15	+1.0
5,192,431	+		Echvi_4342	0.17	-0.7
5,192,548	-		Echvi_4342	0.21	-2.1
5,192,565	+		Echvi_4342	0.22	-0.2
5,192,565	+		Echvi_4342	0.22	-3.0
5,192,567	+		Echvi_4342	0.22	-0.7
5,192,567	+		Echvi_4342	0.22	+0.2
5,192,568	-		Echvi_4342	0.22	-0.4
5,192,568	-		Echvi_4342	0.22	+0.3
5,192,617	+		Echvi_4342	0.23	-1.3
5,192,626	+		Echvi_4342	0.24	-1.1
5,192,626	+		Echvi_4342	0.24	+0.3
5,192,731	+		Echvi_4342	0.28	-2.1
5,192,761	+		Echvi_4342	0.29	+0.3
5,192,761	+		Echvi_4342	0.29	+0.4
5,192,762	-		Echvi_4342	0.29	+0.7
5,192,762	-		Echvi_4342	0.29	+0.6
5,192,766	+		Echvi_4342	0.29	-0.1
5,192,766	+		Echvi_4342	0.29	-0.2
5,192,767	-		Echvi_4342	0.29	+0.8
5,192,878	-		Echvi_4342	0.33	+0.5
5,192,925	+		Echvi_4342	0.35	-0.1
5,192,926	-		Echvi_4342	0.35	+0.5
5,192,926	-		Echvi_4342	0.35	-0.3