Experiment: Xylobiose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0696 and Echvi_0697 are separated by 15 nucleotides Echvi_0697 and Echvi_0698 are separated by 131 nucleotides
Echvi_0696: Echvi_0696 - galactokinase, at 786,406 to 787,557
_0696
Echvi_0697: Echvi_0697 - Aldose 1-epimerase (EC 5.1.3.3) <small>(from data)</small>, at 787,573 to 788,652
_0697
Echvi_0698: Echvi_0698 - Transcriptional regulators, at 788,784 to 789,800
_0698
Position (kb) 787
788
789 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 786.643 kb on + strand, within Echvi_0696 at 786.671 kb on + strand, within Echvi_0696 at 786.671 kb on + strand, within Echvi_0696 at 786.868 kb on + strand, within Echvi_0696 at 786.869 kb on - strand, within Echvi_0696 at 787.289 kb on + strand, within Echvi_0696 at 787.543 kb on - strand at 787.566 kb on - strand at 787.566 kb on - strand at 787.566 kb on - strand at 787.566 kb on - strand at 787.574 kb on + strand at 787.575 kb on - strand at 787.578 kb on + strand at 787.579 kb on - strand at 787.634 kb on - strand at 787.637 kb on - strand at 787.760 kb on + strand, within Echvi_0697 at 787.760 kb on + strand, within Echvi_0697 at 787.761 kb on - strand, within Echvi_0697 at 787.882 kb on + strand, within Echvi_0697 at 787.882 kb on + strand, within Echvi_0697 at 787.883 kb on - strand, within Echvi_0697 at 787.958 kb on - strand, within Echvi_0697 at 787.983 kb on + strand, within Echvi_0697 at 788.004 kb on + strand, within Echvi_0697 at 788.005 kb on - strand, within Echvi_0697 at 788.005 kb on - strand, within Echvi_0697 at 788.006 kb on + strand, within Echvi_0697 at 788.006 kb on + strand, within Echvi_0697 at 788.006 kb on + strand, within Echvi_0697 at 788.006 kb on + strand, within Echvi_0697 at 788.007 kb on - strand, within Echvi_0697 at 788.007 kb on - strand, within Echvi_0697 at 788.007 kb on - strand, within Echvi_0697 at 788.070 kb on + strand, within Echvi_0697 at 788.076 kb on - strand, within Echvi_0697 at 788.160 kb on + strand, within Echvi_0697 at 788.192 kb on + strand, within Echvi_0697 at 788.311 kb on - strand, within Echvi_0697 at 788.314 kb on + strand, within Echvi_0697 at 788.314 kb on + strand, within Echvi_0697 at 788.315 kb on - strand, within Echvi_0697 at 788.328 kb on - strand, within Echvi_0697 at 788.370 kb on + strand, within Echvi_0697 at 788.430 kb on + strand, within Echvi_0697 at 788.430 kb on + strand, within Echvi_0697 at 788.431 kb on - strand, within Echvi_0697 at 788.432 kb on + strand, within Echvi_0697 at 788.432 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.441 kb on + strand, within Echvi_0697 at 788.442 kb on - strand, within Echvi_0697 at 788.442 kb on - strand, within Echvi_0697 at 788.442 kb on - strand, within Echvi_0697 at 788.442 kb on - strand, within Echvi_0697 at 788.442 kb on - strand, within Echvi_0697 at 788.519 kb on + strand, within Echvi_0697 at 788.519 kb on + strand, within Echvi_0697 at 788.520 kb on - strand, within Echvi_0697 at 788.520 kb on - strand, within Echvi_0697 at 788.520 kb on - strand, within Echvi_0697 at 788.566 kb on + strand at 788.657 kb on - strand at 788.666 kb on + strand at 788.667 kb on - strand at 788.689 kb on + strand at 788.689 kb on + strand at 788.690 kb on - strand at 788.690 kb on - strand at 788.690 kb on - strand at 788.712 kb on - strand at 788.785 kb on + strand at 788.819 kb on + strand at 788.850 kb on - strand at 788.960 kb on + strand, within Echvi_0698 at 788.960 kb on + strand, within Echvi_0698 at 789.134 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.217 kb on + strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.218 kb on - strand, within Echvi_0698 at 789.239 kb on + strand, within Echvi_0698 at 789.246 kb on + strand, within Echvi_0698 at 789.287 kb on + strand, within Echvi_0698 at 789.289 kb on + strand, within Echvi_0698 at 789.290 kb on - strand, within Echvi_0698 at 789.520 kb on + strand, within Echvi_0698 at 789.617 kb on + strand, within Echvi_0698
Per-strain Table
Position Strand Gene LocusTag Fraction Xylobiose (C) remove 786,643 + Echvi_0696 0.21 -0.6 786,671 + Echvi_0696 0.23 -0.2 786,671 + Echvi_0696 0.23 +0.3 786,868 + Echvi_0696 0.40 -1.4 786,869 - Echvi_0696 0.40 -0.1 787,289 + Echvi_0696 0.77 -1.9 787,543 - +1.3 787,566 - +0.2 787,566 - -0.6 787,566 - -3.1 787,566 - +1.1 787,574 + +0.9 787,575 - +0.7 787,578 + -0.1 787,579 - +0.9 787,634 - -1.6 787,637 - +0.4 787,760 + Echvi_0697 0.17 +0.0 787,760 + Echvi_0697 0.17 -0.8 787,761 - Echvi_0697 0.17 -0.9 787,882 + Echvi_0697 0.29 -1.4 787,882 + Echvi_0697 0.29 -0.7 787,883 - Echvi_0697 0.29 +0.1 787,958 - Echvi_0697 0.36 -0.4 787,983 + Echvi_0697 0.38 +1.0 788,004 + Echvi_0697 0.40 -0.3 788,005 - Echvi_0697 0.40 -0.7 788,005 - Echvi_0697 0.40 -2.6 788,006 + Echvi_0697 0.40 +0.6 788,006 + Echvi_0697 0.40 -2.8 788,006 + Echvi_0697 0.40 -0.2 788,006 + Echvi_0697 0.40 -1.1 788,007 - Echvi_0697 0.40 +0.5 788,007 - Echvi_0697 0.40 -2.6 788,007 - Echvi_0697 0.40 +1.3 788,070 + Echvi_0697 0.46 -3.0 788,076 - Echvi_0697 0.47 -0.5 788,160 + Echvi_0697 0.54 -0.1 788,192 + Echvi_0697 0.57 -0.3 788,311 - Echvi_0697 0.68 -1.7 788,314 + Echvi_0697 0.69 +0.1 788,314 + Echvi_0697 0.69 -0.2 788,315 - Echvi_0697 0.69 -1.2 788,328 - Echvi_0697 0.70 -1.1 788,370 + Echvi_0697 0.74 +0.8 788,430 + Echvi_0697 0.79 -0.1 788,430 + Echvi_0697 0.79 +0.5 788,431 - Echvi_0697 0.79 -1.4 788,432 + Echvi_0697 0.80 +0.2 788,432 + Echvi_0697 0.80 -0.9 788,441 + Echvi_0697 0.80 -0.2 788,441 + Echvi_0697 0.80 -0.9 788,441 + Echvi_0697 0.80 -1.3 788,441 + Echvi_0697 0.80 -0.2 788,441 + Echvi_0697 0.80 -0.1 788,441 + Echvi_0697 0.80 -0.4 788,441 + Echvi_0697 0.80 +1.4 788,442 - Echvi_0697 0.80 -1.6 788,442 - Echvi_0697 0.80 -0.6 788,442 - Echvi_0697 0.80 -2.0 788,442 - Echvi_0697 0.80 -2.1 788,442 - Echvi_0697 0.80 -0.1 788,519 + Echvi_0697 0.88 +0.2 788,519 + Echvi_0697 0.88 -0.8 788,520 - Echvi_0697 0.88 -0.5 788,520 - Echvi_0697 0.88 +1.0 788,520 - Echvi_0697 0.88 -1.3 788,566 + -0.5 788,657 - +0.2 788,666 + -0.1 788,667 - +2.0 788,689 + +0.4 788,689 + +1.2 788,690 - -0.2 788,690 - -0.3 788,690 - -1.6 788,712 - -0.3 788,785 + +2.8 788,819 + +0.7 788,850 - +0.3 788,960 + Echvi_0698 0.17 +0.5 788,960 + Echvi_0698 0.17 -0.5 789,134 + Echvi_0698 0.34 -1.1 789,217 + Echvi_0698 0.43 -0.9 789,217 + Echvi_0698 0.43 +1.5 789,217 + Echvi_0698 0.43 -1.0 789,217 + Echvi_0698 0.43 +0.3 789,217 + Echvi_0698 0.43 +1.4 789,217 + Echvi_0698 0.43 -0.6 789,217 + Echvi_0698 0.43 -1.4 789,218 - Echvi_0698 0.43 +1.2 789,218 - Echvi_0698 0.43 -0.8 789,218 - Echvi_0698 0.43 -0.2 789,218 - Echvi_0698 0.43 -0.6 789,218 - Echvi_0698 0.43 +0.5 789,218 - Echvi_0698 0.43 -0.1 789,218 - Echvi_0698 0.43 +0.3 789,218 - Echvi_0698 0.43 -0.6 789,239 + Echvi_0698 0.45 -0.1 789,246 + Echvi_0698 0.45 +0.2 789,287 + Echvi_0698 0.49 +1.2 789,289 + Echvi_0698 0.50 +0.6 789,290 - Echvi_0698 0.50 -1.9 789,520 + Echvi_0698 0.72 +0.2 789,617 + Echvi_0698 0.82 -0.2
Or see this region's nucleotide sequence