Strain Fitness in Escherichia coli BW25113 around b2928

Experiment: inner cut, LB soft agar motility assay

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	inner cut, LB soft agar motility assay
3,071,084	-				+4.2
3,071,184	+	epd	b2927	0.48	+1.5
3,071,199	-	epd	b2927	0.50	-0.1
3,071,204	-	epd	b2927	0.50	+0.6
3,071,204	-	epd	b2927	0.50	+0.9
3,071,230	+	epd	b2927	0.53	-0.7
3,071,230	+	epd	b2927	0.53	+0.8
3,071,268	+	epd	b2927	0.56	-0.8
3,071,294	+				+1.9
3,071,294	+	epd	b2927	0.59	-0.8
3,071,309	+	epd	b2927	0.60	-0.0
3,071,450	+	epd	b2927	0.74	+1.4
3,071,464	+	epd	b2927	0.75	-1.5
3,071,494	+	epd	b2927	0.78	-1.8
3,071,536	+	epd	b2927	0.83	+1.5
3,071,557	-	epd	b2927	0.85	+0.3
3,071,557	-	epd	b2927	0.85	+0.2
3,071,600	-	epd	b2927	0.89	+0.7
3,071,717	-				-1.2
3,071,763	-				-2.1
3,071,763	-				-0.7
3,071,942	-				-0.4
3,071,946	+				+1.4
3,071,954	-				+1.3
3,072,064	-				-2.2
3,072,064	-				+1.8
3,072,088	-	yggC	b2928	0.13	-0.5
3,072,160	-	yggC	b2928	0.23	+0.2
3,072,240	-	yggC	b2928	0.34	-1.4
3,072,240	-	yggC	b2928	0.34	-1.2
3,072,340	+	yggC	b2928	0.48	-1.0
3,072,340	+	yggC	b2928	0.48	+1.7
3,072,367	-	yggC	b2928	0.52	+1.3
3,072,434	-	yggC	b2928	0.61	+0.2
3,072,495	+	yggC	b2928	0.70	-0.4
3,072,495	+	yggC	b2928	0.70	+1.3
3,072,551	+	yggC	b2928	0.77	+4.1
3,072,551	+	yggC	b2928	0.77	+1.3
3,072,578	+	yggC	b2928	0.81	+0.6
3,072,612	-	yggC	b2928	0.86	+2.1
3,072,671	+				-0.6
3,072,672	-				-2.0
3,072,695	-				+1.3
3,072,695	-				-0.2
3,072,827	+	yggD	b2929	0.23	+1.3
3,072,856	+	yggD	b2929	0.29	-1.0
3,072,939	-	yggD	b2929	0.45	-0.3
3,072,969	-	yggD	b2929	0.51	-0.3
3,073,062	+	yggD	b2929	0.69	+0.9
3,073,062	+	yggD	b2929	0.69	+0.7
3,073,174	+				+0.1
3,073,204	-				+0.6
3,073,204	-				+0.6
3,073,263	-				-0.4
3,073,272	-				-0.3
3,073,322	+				+1.9
3,073,328	-				+0.1
3,073,330	-				+0.0
3,073,414	-	yggF	b2930	0.18	+0.1
3,073,518	+	yggF	b2930	0.29	+1.3
3,073,518	+	yggF	b2930	0.29	+2.3