Strain Fitness in Pseudomonas putida KT2440 around PP_2524

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,870,774	-				+0.3
2,870,778	+				+1.1
2,870,779	-				+0.3
2,870,928	+				-0.1
2,870,929	-				+1.0
2,870,929	-				+1.2
2,870,930	+				-0.3
2,870,930	+				-0.9
2,871,056	-				+1.8
2,871,056	-				-1.1
2,871,079	+				+0.1
2,871,120	+				+0.1
2,871,120	+				-1.5
2,871,153	+				+0.4
2,871,215	+				+0.7
2,871,215	+				+0.1
2,871,216	-				-1.9
2,871,247	+				+1.1
2,871,277	+				-0.1
2,871,278	-				-0.0
2,871,321	+		PP_2524	0.15	+0.2
2,871,440	+				-0.1
2,871,440	+		PP_2524	0.33	+0.8
2,871,441	-		PP_2524	0.33	-0.1
2,871,527	+		PP_2524	0.46	+0.8
2,871,528	-		PP_2524	0.46	+0.6
2,871,554	-		PP_2524	0.50	+0.4
2,871,652	+		PP_2524	0.65	+0.4
2,871,683	-		PP_2524	0.70	+1.1
2,871,683	-		PP_2524	0.70	+1.7
2,871,783	+		PP_2524	0.85	-1.1
2,871,784	-		PP_2524	0.85	+0.7
2,871,784	-		PP_2524	0.85	+0.4
2,871,894	+				-0.6
2,871,895	-				+0.8
2,871,992	+				+0.5
2,871,993	-				-0.1
2,872,050	-		PP_2525	0.12	+0.6
2,872,265	+		PP_2525	0.30	-0.3
2,872,266	-		PP_2525	0.30	-0.2
2,872,695	-		PP_2525	0.67	+0.5