Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2615

Experiment: NAG (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	NAG (C)
3,098,442	-		Echvi_2614	0.45	+0.1
3,098,445	+		Echvi_2614	0.45	+0.3
3,098,458	-		Echvi_2614	0.46	+0.7
3,098,513	-		Echvi_2614	0.50	+0.1
3,098,549	+		Echvi_2614	0.52	+1.3
3,098,549	+		Echvi_2614	0.52	+0.4
3,098,549	+		Echvi_2614	0.52	-0.5
3,098,550	-		Echvi_2614	0.52	-0.5
3,098,622	+		Echvi_2614	0.56	-1.3
3,098,622	+		Echvi_2614	0.56	+0.2
3,098,622	+		Echvi_2614	0.56	-0.0
3,098,622	+		Echvi_2614	0.56	+0.5
3,098,623	-		Echvi_2614	0.56	-0.6
3,098,651	+		Echvi_2614	0.58	+0.5
3,098,655	-		Echvi_2614	0.58	+0.9
3,098,819	+		Echvi_2614	0.69	+0.3
3,098,825	+		Echvi_2614	0.69	-0.5
3,098,960	+		Echvi_2614	0.77	+0.3
3,098,960	+		Echvi_2614	0.77	+0.7
3,098,960	+		Echvi_2614	0.77	-0.4
3,099,077	+		Echvi_2614	0.85	-1.1
3,099,159	-		Echvi_2614	0.90	-2.9
3,099,180	+				+0.2
3,099,185	+				+0.4
3,099,186	-				-0.3
3,099,186	-				+0.6
3,099,264	+				-0.6
3,099,264	+				-0.5
3,099,264	+				+0.3
3,099,264	+				-0.1
3,099,264	+				+0.3
3,099,264	+				+0.3
3,099,265	-				-0.4
3,099,265	-				-0.6
3,099,353	+				+1.2
3,099,353	+				-1.3
3,099,373	+				-1.8
3,099,382	+				+0.2
3,099,386	-				+0.3
3,099,430	-				+0.6
3,099,468	+				-2.1
3,099,469	-				-0.8
3,099,487	+				-0.3
3,099,487	+				+0.9
3,099,487	+				-0.5
3,099,487	+				+0.8
3,099,548	+				+0.4
3,099,565	+				-0.0
3,099,630	-				+1.3
3,099,630	-				-0.5
3,099,672	-		Echvi_2615	0.11	-0.1
3,099,749	+		Echvi_2615	0.14	+0.3
3,099,813	+		Echvi_2615	0.16	+2.2
3,099,814	-		Echvi_2615	0.16	-1.3
3,099,892	+		Echvi_2615	0.18	-1.8
3,099,893	-		Echvi_2615	0.18	+0.1
3,099,903	+		Echvi_2615	0.19	+1.1
3,100,257	+		Echvi_2615	0.30	-0.4
3,100,257	+		Echvi_2615	0.30	-1.4
3,100,303	+		Echvi_2615	0.32	-1.1
3,100,303	+		Echvi_2615	0.32	-1.4
3,100,304	-		Echvi_2615	0.32	-0.3
3,100,317	+		Echvi_2615	0.32	+0.8
3,100,318	-		Echvi_2615	0.32	-0.7
3,100,348	+		Echvi_2615	0.33	+0.1
3,100,348	+		Echvi_2615	0.33	+1.7
3,100,349	-		Echvi_2615	0.33	-0.8
3,100,349	-		Echvi_2615	0.33	-0.3
3,100,349	-		Echvi_2615	0.33	+0.5
3,100,440	+		Echvi_2615	0.36	-1.1
3,100,629	-		Echvi_2615	0.42	+0.1
3,100,640	+		Echvi_2615	0.43	+0.0
3,100,640	+		Echvi_2615	0.43	+0.4
3,100,642	+		Echvi_2615	0.43	-1.7
3,100,643	-		Echvi_2615	0.43	-1.1
3,100,643	-		Echvi_2615	0.43	+0.5
3,100,721	+		Echvi_2615	0.45	-0.4
3,100,730	-		Echvi_2615	0.46	-1.1
3,100,767	+		Echvi_2615	0.47	+0.4
3,100,785	-		Echvi_2615	0.48	+0.2
3,100,804	+		Echvi_2615	0.48	+0.0
3,100,804	+		Echvi_2615	0.48	-0.4
3,100,804	+		Echvi_2615	0.48	-1.6
3,100,805	-		Echvi_2615	0.48	+0.6
3,100,805	-		Echvi_2615	0.48	-0.7
3,100,805	-		Echvi_2615	0.48	-0.8
3,100,834	+		Echvi_2615	0.49	-0.6
3,100,835	-		Echvi_2615	0.49	-0.8
3,100,848	-		Echvi_2615	0.50	+0.2
3,100,921	+		Echvi_2615	0.52	+0.3
3,100,938	+		Echvi_2615	0.53	-0.4
3,100,939	-		Echvi_2615	0.53	-1.6
3,100,939	-		Echvi_2615	0.53	-0.2
3,100,939	-		Echvi_2615	0.53	-0.0
3,100,939	-		Echvi_2615	0.53	+0.3
3,100,955	+		Echvi_2615	0.53	-0.3
3,100,955	+		Echvi_2615	0.53	-1.2
3,100,971	-		Echvi_2615	0.54	-0.9
3,100,986	+		Echvi_2615	0.54	+0.7
3,100,987	-		Echvi_2615	0.54	-0.3
3,100,987	-		Echvi_2615	0.54	-0.7
3,101,072	-		Echvi_2615	0.57	+0.2
3,101,072	-		Echvi_2615	0.57	-0.9
3,101,074	+		Echvi_2615	0.57	+1.2
3,101,174	+		Echvi_2615	0.60	+0.9
3,101,174	+		Echvi_2615	0.60	-0.2
3,101,177	+		Echvi_2615	0.60	-1.3
3,101,177	+		Echvi_2615	0.60	-0.1
3,101,178	-		Echvi_2615	0.60	-0.8
3,101,197	+		Echvi_2615	0.61	-1.6
3,101,267	-		Echvi_2615	0.63	+0.5
3,101,334	-		Echvi_2615	0.65	+0.1
3,101,361	+		Echvi_2615	0.66	-0.4
3,101,362	-		Echvi_2615	0.66	+0.5
3,101,439	+		Echvi_2615	0.69	+1.9
3,101,439	+		Echvi_2615	0.69	+0.2
3,101,458	+		Echvi_2615	0.70	-1.9
3,101,459	-		Echvi_2615	0.70	+1.9
3,101,490	+		Echvi_2615	0.71	-1.8
3,101,491	-		Echvi_2615	0.71	-0.3
3,101,521	+		Echvi_2615	0.72	-0.3
3,101,521	+		Echvi_2615	0.72	-0.6
3,101,521	+		Echvi_2615	0.72	-0.8
3,101,521	+		Echvi_2615	0.72	+1.5
3,101,522	-		Echvi_2615	0.72	-0.6
3,101,522	-		Echvi_2615	0.72	+0.9
3,101,522	-		Echvi_2615	0.72	+0.3
3,101,522	-		Echvi_2615	0.72	-0.3
3,101,530	+		Echvi_2615	0.72	-1.6
3,101,531	-		Echvi_2615	0.72	-1.9
3,101,741	+		Echvi_2615	0.79	-1.1
3,101,944	-		Echvi_2615	0.85	-0.1
3,101,944	-		Echvi_2615	0.85	+1.2
3,102,036	+		Echvi_2615	0.88	-0.1
3,102,037	-		Echvi_2615	0.88	-0.3
3,102,037	-		Echvi_2615	0.88	-0.5
3,102,037	-		Echvi_2615	0.88	+0.4
3,102,055	-		Echvi_2615	0.89	-0.6
3,102,060	+		Echvi_2615	0.89	-1.6
3,102,186	+				-1.3
3,102,258	-				-0.1
3,102,377	+				+0.0
3,102,378	-				+0.2
3,102,378	-				+0.6
3,102,382	-				-0.3
3,102,398	-				+0.3
3,102,414	-				-2.1
3,102,421	+				+0.7
3,102,444	+				+0.4
3,102,489	-				-1.4
3,102,498	+				-1.1
3,102,520	+				+0.8
3,102,528	+				+0.5
3,102,531	+				-0.5
3,102,604	+				+1.6
3,102,663	+				+0.0
3,102,663	+				-1.6
3,102,664	-				+1.0
3,102,735	-				-0.2
3,102,825	+				-0.1
3,102,831	+				-1.3
3,102,831	+				-0.6
3,102,831	+				+0.4
3,102,831	+				+0.4
3,102,831	+				-1.5
3,102,831	+				-0.1
3,102,831	+				-0.7
3,102,831	+				-0.1
3,102,832	-				+2.0
3,102,832	-				-0.5
3,102,833	+				-1.6
3,102,833	+				-0.0
3,102,834	-				-0.6
3,102,834	-				+1.7
3,102,834	-				-0.1
3,102,834	-				-1.6
3,102,834	-				-0.2
3,102,834	-				+0.7
3,102,835	+				+0.3
3,102,836	-				+0.7
3,102,878	+		Echvi_2616	0.12	+1.4
3,102,940	-		Echvi_2616	0.18	-0.7
3,102,940	-		Echvi_2616	0.18	+0.9
3,102,978	+		Echvi_2616	0.21	-0.0
3,102,978	+		Echvi_2616	0.21	-0.6
3,102,979	-		Echvi_2616	0.21	+0.9
3,102,979	-		Echvi_2616	0.21	-0.5
3,102,979	-		Echvi_2616	0.21	+0.1
3,102,979	-		Echvi_2616	0.21	-0.3
3,102,982	-		Echvi_2616	0.21	+0.3
3,102,985	-		Echvi_2616	0.22	+0.1
3,103,151	+		Echvi_2616	0.36	-0.3
3,103,152	-		Echvi_2616	0.36	-0.7
3,103,152	-		Echvi_2616	0.36	+3.2
3,103,152	-		Echvi_2616	0.36	+1.0
3,103,160	-		Echvi_2616	0.37	+0.4
3,103,191	+		Echvi_2616	0.39	+0.1
3,103,191	+		Echvi_2616	0.39	-0.7
3,103,192	-		Echvi_2616	0.39	+0.2
3,103,192	-		Echvi_2616	0.39	-0.3
3,103,192	-		Echvi_2616	0.39	-0.3
3,103,192	-		Echvi_2616	0.39	-0.1
3,103,217	+		Echvi_2616	0.42	+1.9
3,103,268	-		Echvi_2616	0.46	-0.5
3,103,283	+		Echvi_2616	0.47	-0.0
3,103,297	-		Echvi_2616	0.48	-0.4
3,103,309	+		Echvi_2616	0.49	+0.5
3,103,348	-		Echvi_2616	0.53	-0.6
3,103,365	+		Echvi_2616	0.54	+0.8