Strain Fitness in Pseudomonas putida KT2440 around PP_4597

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
5,216,191	+		PP_4596	0.78	+0.3
5,216,192	-		PP_4596	0.78	+0.2
5,216,212	+		PP_4596	0.79	-0.0
5,216,251	+		PP_4596	0.80	+0.2
5,216,252	-		PP_4596	0.81	+0.2
5,216,252	-		PP_4596	0.81	-0.1
5,216,252	-		PP_4596	0.81	+0.4
5,216,336	-		PP_4596	0.84	+0.5
5,216,336	-		PP_4596	0.84	+0.4
5,216,336	-		PP_4596	0.84	+0.7
5,216,386	+		PP_4596	0.86	+0.6
5,216,386	+		PP_4596	0.86	-0.1
5,216,386	+		PP_4596	0.86	-0.8
5,216,398	+		PP_4596	0.87	-1.0
5,216,398	+		PP_4596	0.87	+0.1
5,216,431	+		PP_4596	0.88	-0.4
5,216,431	+		PP_4596	0.88	-0.4
5,216,431	+		PP_4596	0.88	+0.4
5,216,432	-		PP_4596	0.88	-0.2
5,216,432	-		PP_4596	0.88	-0.1
5,216,432	-		PP_4596	0.88	-0.1
5,216,432	-		PP_4596	0.88	+0.6
5,216,678	-				+0.7
5,216,678	-				-0.4
5,216,678	-				-0.3
5,216,678	-				+0.5
5,216,678	-				+0.4
5,216,743	+				-0.3
5,216,743	+				+0.1
5,216,743	+				+0.9
5,216,743	+				+0.1
5,216,744	-				+0.1
5,216,780	+				+0.6
5,216,820	+				+0.7
5,216,821	-				+0.6
5,216,833	-				-0.7
5,216,890	+				-0.4
5,216,890	+				-0.5
5,216,891	-				-0.2
5,217,024	+				+0.0
5,217,024	+				+0.0
5,217,024	+				+0.5
5,217,025	-				-0.8
5,217,025	-				-0.2
5,217,025	-				-0.3
5,217,157	+		PP_4597	0.23	+0.6
5,217,157	+		PP_4597	0.23	-0.2
5,217,157	+		PP_4597	0.23	-0.9
5,217,352	+		PP_4597	0.42	+0.2
5,217,353	-		PP_4597	0.42	-1.2
5,217,353	-		PP_4597	0.42	-1.0
5,217,362	-		PP_4597	0.43	-0.5
5,217,571	+		PP_4597	0.64	-0.7
5,217,639	+		PP_4597	0.71	+0.4
5,218,094	+		PP_4598	0.16	+0.3
5,218,094	+		PP_4598	0.16	+0.2
5,218,099	-		PP_4598	0.16	+1.6
5,218,481	+		PP_4598	0.59	+0.6
5,218,482	-		PP_4598	0.59	-0.9
5,218,588	+		PP_4598	0.71	+0.5
5,218,588	+		PP_4598	0.71	+0.8
5,218,588	+		PP_4598	0.71	+0.7
5,218,589	-		PP_4598	0.71	-0.5
5,218,589	-		PP_4598	0.71	+0.4
5,218,589	-		PP_4598	0.71	+0.1
5,218,589	-		PP_4598	0.71	+0.9
5,218,591	+		PP_4598	0.71	+0.2
5,218,592	-		PP_4598	0.71	+0.3
5,218,592	-		PP_4598	0.71	+0.4
5,218,592	-		PP_4598	0.71	+0.4
5,218,595	+		PP_4598	0.71	-0.2
5,218,595	+		PP_4598	0.71	-0.5
5,218,838	+				-0.6
5,218,839	-				-0.4
5,218,839	-				-1.1
5,218,839	-				-0.3
5,218,901	-				-0.2
5,218,901	-				-0.7
5,218,906	-				+0.3