Strain Fitness in Pseudomonas putida KT2440 around PP_2926

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,325,885	-		PP_2925	0.39	-0.7
3,325,885	-		PP_2925	0.39	+0.1
3,326,100	+		PP_2925	0.53	+2.0
3,326,100	+		PP_2925	0.53	-0.4
3,326,100	+		PP_2925	0.53	+0.1
3,326,179	-		PP_2925	0.57	+0.3
3,326,236	+		PP_2925	0.61	-0.2
3,326,451	+		PP_2925	0.74	-0.4
3,326,633	+		PP_2925	0.85	+0.6
3,326,633	+		PP_2925	0.85	+0.1
3,326,755	+				+0.7
3,326,772	+				-0.5
3,326,773	-				+0.0
3,326,774	+				+0.0
3,326,774	+				-1.0
3,326,774	+				-1.1
3,326,775	-				+0.2
3,326,775	-				-0.9
3,326,775	-				-0.4
3,326,866	-				+0.3
3,326,914	+				-0.0
3,326,914	+				+0.3
3,326,915	-				+0.1
3,327,023	-		PP_2926	0.11	-0.0
3,327,218	+		PP_2926	0.26	-0.0
3,327,445	+		PP_2926	0.43	+0.1
3,327,446	-		PP_2926	0.43	+0.1
3,327,583	+		PP_2926	0.53	+0.4
3,327,583	+		PP_2926	0.53	+1.2
3,327,584	-		PP_2926	0.53	+0.2
3,327,584	-		PP_2926	0.53	-0.2
3,327,584	-		PP_2926	0.53	+0.7
3,327,652	+		PP_2926	0.58	+0.1
3,327,653	-		PP_2926	0.58	+0.9
3,327,653	-		PP_2926	0.58	-0.3
3,327,830	+		PP_2926	0.72	+0.8
3,327,929	+		PP_2926	0.79	-1.3
3,327,929	+		PP_2926	0.79	+0.8
3,327,930	-		PP_2926	0.79	-0.3
3,327,950	+		PP_2926	0.81	-0.3
3,327,951	-		PP_2926	0.81	-0.8
3,327,979	+		PP_2926	0.83	+0.3
3,327,979	+		PP_2926	0.83	+1.0
3,327,980	-		PP_2926	0.83	+0.0
3,327,980	-		PP_2926	0.83	-0.6
3,328,141	-				+0.3
3,328,177	+				+0.0
3,328,256	-				-0.6
3,328,291	+				-0.4
3,328,327	+				-0.1
3,328,334	-				-0.9
3,328,663	+		PP_2927	0.20	-0.2
3,328,741	+		PP_2927	0.28	-1.0
3,328,741	+		PP_2927	0.28	-0.6
3,328,741	+		PP_2927	0.28	-0.5
3,328,742	-		PP_2927	0.28	+0.7
3,329,047	+		PP_2927	0.57	-0.3