Strain Fitness in Pseudomonas putida KT2440 around PP_2683

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,071,343	+		PP_2682	0.17	+0.1
3,071,344	-		PP_2682	0.17	-0.5
3,071,353	-		PP_2682	0.18	+0.2
3,071,409	+		PP_2682	0.22	-0.2
3,071,410	-		PP_2682	0.23	+0.9
3,071,862	-		PP_2682	0.61	+0.2
3,071,867	+		PP_2682	0.62	+0.2
3,071,868	-		PP_2682	0.62	+1.1
3,071,868	-		PP_2682	0.62	+0.2
3,072,206	+				-0.0
3,072,294	+				+0.4
3,072,294	+				+0.4
3,072,612	+		PP_2683	0.19	-0.3
3,072,889	+		PP_2683	0.36	-0.0
3,072,889	+		PP_2683	0.36	-0.3
3,073,100	-		PP_2683	0.48	-0.6
3,073,370	+		PP_2683	0.64	-0.2
3,073,370	+		PP_2683	0.64	+0.2
3,073,371	-		PP_2683	0.64	-1.3
3,073,526	+		PP_2683	0.74	+0.3
3,073,637	+				-0.4
3,073,638	-		PP_2683	0.80	+0.9
3,073,756	+		PP_2683	0.87	+0.2
3,073,757	-		PP_2683	0.87	+0.8
3,073,775	+		PP_2683	0.89	-1.2
3,073,799	-				-0.2
3,073,966	+				-1.8
3,073,967	-				+0.5
3,073,971	+				+0.4
3,073,972	-				-2.2
3,074,003	+				-0.0
3,074,096	+				-0.0
3,074,352	-				+0.3
3,074,416	-				+0.5
3,074,422	-				+0.3
3,074,429	+				-0.7
3,074,463	+				-0.2
3,074,464	-				+0.2
3,074,464	-				-1.5
3,074,519	-		PP_2684	0.17	-0.2
3,074,529	-		PP_2684	0.19	+2.2
3,074,563	-		PP_2684	0.24	+0.8
3,074,813	+		PP_2684	0.59	+0.6
3,074,817	-		PP_2684	0.59	+0.8
3,074,864	+		PP_2684	0.66	+0.6