Experiment: methyl 3-keto-a-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0736 and Echvi_0737 are separated by 908 nucleotides Echvi_0737 and Echvi_0738 are separated by 221 nucleotides
Echvi_0736: Echvi_0736 - hypothetical protein, at 824,961 to 825,338
_0736
Echvi_0737: Echvi_0737 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 826,247 to 826,879
_0737
Echvi_0738: Echvi_0738 - Acyl-CoA dehydrogenases, at 827,101 to 828,459
_0738
Position (kb) 826
827 Strain fitness (log2 ratio) -2
-1
0
1
2 at 825.343 kb on + strand at 825.344 kb on - strand at 825.344 kb on - strand at 825.347 kb on + strand at 825.351 kb on + strand at 825.385 kb on + strand at 825.386 kb on - strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.395 kb on + strand at 825.396 kb on - strand at 825.398 kb on + strand at 825.398 kb on + strand at 825.399 kb on - strand at 825.442 kb on + strand at 825.497 kb on + strand at 825.498 kb on - strand at 825.498 kb on - strand at 825.568 kb on + strand at 825.569 kb on - strand at 825.569 kb on - strand at 825.574 kb on + strand at 825.574 kb on + strand at 825.585 kb on - strand at 825.594 kb on - strand at 825.594 kb on - strand at 825.703 kb on + strand at 825.728 kb on - strand at 825.728 kb on - strand at 825.748 kb on - strand at 825.808 kb on + strand at 825.808 kb on + strand at 825.808 kb on + strand at 825.810 kb on + strand at 825.810 kb on + strand at 825.846 kb on + strand at 825.846 kb on + strand at 825.847 kb on - strand at 825.848 kb on + strand at 825.848 kb on + strand at 825.849 kb on - strand at 825.902 kb on - strand at 825.902 kb on - strand at 825.902 kb on - strand at 825.973 kb on + strand at 825.973 kb on + strand at 825.975 kb on + strand at 825.975 kb on + strand at 825.985 kb on + strand at 825.985 kb on + strand at 825.985 kb on + strand at 826.019 kb on + strand at 826.047 kb on + strand at 826.048 kb on - strand at 826.052 kb on + strand at 826.184 kb on + strand at 826.184 kb on + strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.185 kb on - strand at 826.233 kb on + strand at 826.272 kb on - strand at 826.301 kb on + strand at 826.366 kb on + strand, within Echvi_0737 at 826.366 kb on + strand, within Echvi_0737 at 826.391 kb on - strand, within Echvi_0737 at 826.474 kb on + strand, within Echvi_0737 at 826.475 kb on - strand, within Echvi_0737 at 826.495 kb on + strand, within Echvi_0737 at 826.540 kb on - strand, within Echvi_0737 at 826.631 kb on - strand, within Echvi_0737 at 826.735 kb on + strand, within Echvi_0737 at 826.745 kb on + strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.746 kb on - strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.747 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.749 kb on + strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.750 kb on - strand, within Echvi_0737 at 826.777 kb on - strand, within Echvi_0737 at 826.796 kb on - strand, within Echvi_0737 at 826.858 kb on + strand at 826.951 kb on - strand at 826.979 kb on - strand at 826.992 kb on + strand at 827.031 kb on - strand at 827.038 kb on - strand at 827.038 kb on - strand at 827.040 kb on + strand at 827.041 kb on - strand at 827.041 kb on - strand at 827.043 kb on + strand at 827.050 kb on - strand at 827.063 kb on + strand at 827.063 kb on + strand at 827.064 kb on - strand at 827.095 kb on + strand at 827.095 kb on + strand at 827.111 kb on + strand at 827.189 kb on + strand at 827.288 kb on + strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.289 kb on - strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.436 kb on + strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.437 kb on - strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.479 kb on + strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.480 kb on - strand, within Echvi_0738 at 827.560 kb on - strand, within Echvi_0738 at 827.608 kb on + strand, within Echvi_0738 at 827.702 kb on + strand, within Echvi_0738 at 827.733 kb on + strand, within Echvi_0738 at 827.740 kb on - strand, within Echvi_0738 at 827.859 kb on + strand, within Echvi_0738 at 827.860 kb on - strand, within Echvi_0738
Per-strain Table
Position Strand Gene LocusTag Fraction methyl 3-keto-a-D-glucopyranoside (C) remove 825,343 + +0.1 825,344 - -0.7 825,344 - +0.6 825,347 + -1.2 825,351 + -0.3 825,385 + +0.2 825,386 - +1.5 825,395 + -0.3 825,395 + +0.4 825,395 + -0.2 825,395 + -0.4 825,396 - -0.1 825,398 + -1.4 825,398 + -1.2 825,399 - +1.3 825,442 + +0.6 825,497 + -0.3 825,498 - +0.7 825,498 - -1.2 825,568 + -0.9 825,569 - -0.8 825,569 - +0.4 825,574 + -1.2 825,574 + -0.1 825,585 - +0.3 825,594 - +1.1 825,594 - -0.4 825,703 + +0.2 825,728 - +0.7 825,728 - -0.4 825,748 - +0.9 825,808 + -0.2 825,808 + -0.5 825,808 + -1.7 825,810 + -1.8 825,810 + -0.6 825,846 + +0.4 825,846 + +0.1 825,847 - -0.8 825,848 + +0.2 825,848 + -0.2 825,849 - +0.6 825,902 - +0.5 825,902 - -1.0 825,902 - +0.8 825,973 + +0.2 825,973 + +0.6 825,975 + +0.9 825,975 + -1.0 825,985 + -0.7 825,985 + -0.6 825,985 + -0.6 826,019 + +0.5 826,047 + -0.3 826,048 - -0.9 826,052 + -0.6 826,184 + +0.0 826,184 + -0.7 826,185 - +0.6 826,185 - +0.7 826,185 - +0.2 826,185 - -0.2 826,233 + -0.6 826,272 - +0.9 826,301 + -0.5 826,366 + Echvi_0737 0.19 +0.1 826,366 + Echvi_0737 0.19 -0.3 826,391 - Echvi_0737 0.23 -0.3 826,474 + Echvi_0737 0.36 +1.3 826,475 - Echvi_0737 0.36 -0.2 826,495 + Echvi_0737 0.39 -0.8 826,540 - Echvi_0737 0.46 -0.3 826,631 - Echvi_0737 0.61 -0.0 826,735 + Echvi_0737 0.77 -0.1 826,745 + Echvi_0737 0.79 -0.1 826,746 - Echvi_0737 0.79 -0.7 826,746 - Echvi_0737 0.79 -1.0 826,746 - Echvi_0737 0.79 +0.4 826,747 + Echvi_0737 0.79 +0.6 826,747 + Echvi_0737 0.79 -0.6 826,747 + Echvi_0737 0.79 -1.1 826,749 + Echvi_0737 0.79 -0.4 826,749 + Echvi_0737 0.79 +0.1 826,749 + Echvi_0737 0.79 -0.1 826,749 + Echvi_0737 0.79 +0.4 826,750 - Echvi_0737 0.79 +0.6 826,750 - Echvi_0737 0.79 -1.1 826,750 - Echvi_0737 0.79 -0.9 826,750 - Echvi_0737 0.79 -0.2 826,750 - Echvi_0737 0.79 -0.0 826,750 - Echvi_0737 0.79 -1.7 826,750 - Echvi_0737 0.79 -0.8 826,750 - Echvi_0737 0.79 +0.8 826,777 - Echvi_0737 0.84 -2.0 826,796 - Echvi_0737 0.87 -1.0 826,858 + -1.1 826,951 - +0.1 826,979 - +0.6 826,992 + -2.1 827,031 - -0.2 827,038 - -0.0 827,038 - +2.7 827,040 + -0.7 827,041 - -0.2 827,041 - -2.6 827,043 + -0.4 827,050 - -1.7 827,063 + +0.9 827,063 + -0.1 827,064 - -0.0 827,095 + -0.9 827,095 + +0.3 827,111 + +0.4 827,189 + -1.2 827,288 + Echvi_0738 0.14 -1.7 827,289 - Echvi_0738 0.14 -0.4 827,289 - Echvi_0738 0.14 -0.7 827,436 + Echvi_0738 0.25 +0.1 827,436 + Echvi_0738 0.25 -0.3 827,436 + Echvi_0738 0.25 +1.1 827,437 - Echvi_0738 0.25 +0.6 827,437 - Echvi_0738 0.25 +0.0 827,437 - Echvi_0738 0.25 +0.3 827,437 - Echvi_0738 0.25 +1.8 827,437 - Echvi_0738 0.25 -0.7 827,437 - Echvi_0738 0.25 -0.7 827,437 - Echvi_0738 0.25 -0.0 827,479 + Echvi_0738 0.28 +0.3 827,479 + Echvi_0738 0.28 +0.6 827,479 + Echvi_0738 0.28 -0.2 827,479 + Echvi_0738 0.28 -0.8 827,479 + Echvi_0738 0.28 -0.6 827,480 - Echvi_0738 0.28 -0.1 827,480 - Echvi_0738 0.28 -1.0 827,480 - Echvi_0738 0.28 +0.4 827,480 - Echvi_0738 0.28 +1.1 827,480 - Echvi_0738 0.28 +1.0 827,480 - Echvi_0738 0.28 +0.2 827,480 - Echvi_0738 0.28 -0.9 827,480 - Echvi_0738 0.28 -0.4 827,560 - Echvi_0738 0.34 -0.5 827,608 + Echvi_0738 0.37 -0.7 827,702 + Echvi_0738 0.44 +0.3 827,733 + Echvi_0738 0.47 +0.1 827,740 - Echvi_0738 0.47 +0.1 827,859 + Echvi_0738 0.56 +0.4 827,860 - Echvi_0738 0.56 -1.8
Or see this region's nucleotide sequence