Experiment: Methyl beta-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4394 and Echvi_4395 are separated by 7 nucleotides Echvi_4395 and Echvi_4396 are separated by 66 nucleotides
Echvi_4394: Echvi_4394 - Glycosyltransferase, at 5,252,967 to 5,254,091
_4394
Echvi_4395: Echvi_4395 - Membrane protein involved in the export of O-antigen and teichoic acid, at 5,254,099 to 5,255,352
_4395
Echvi_4396: Echvi_4396 - Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis, at 5,255,419 to 5,256,576
_4396
Position (kb) 5254
5255
5256 Strain fitness (log2 ratio) -2
-1
0
1 at 5254.087 kb on - strand at 5254.105 kb on - strand at 5255.363 kb on - strand at 5255.369 kb on - strand at 5255.369 kb on - strand at 5255.552 kb on - strand, within Echvi_4396 at 5255.612 kb on - strand, within Echvi_4396 at 5255.644 kb on - strand, within Echvi_4396 at 5255.644 kb on - strand, within Echvi_4396 at 5255.663 kb on - strand, within Echvi_4396 at 5255.683 kb on - strand, within Echvi_4396 at 5255.765 kb on - strand, within Echvi_4396 at 5255.765 kb on - strand, within Echvi_4396 at 5255.839 kb on - strand, within Echvi_4396 at 5255.841 kb on - strand, within Echvi_4396 at 5255.841 kb on - strand, within Echvi_4396 at 5255.860 kb on - strand, within Echvi_4396 at 5255.889 kb on + strand, within Echvi_4396 at 5255.893 kb on - strand, within Echvi_4396 at 5255.914 kb on + strand, within Echvi_4396 at 5255.941 kb on + strand, within Echvi_4396 at 5255.942 kb on - strand, within Echvi_4396 at 5255.948 kb on - strand, within Echvi_4396 at 5255.956 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.961 kb on - strand, within Echvi_4396 at 5255.986 kb on - strand, within Echvi_4396 at 5256.021 kb on - strand, within Echvi_4396 at 5256.021 kb on - strand, within Echvi_4396 at 5256.027 kb on + strand, within Echvi_4396 at 5256.028 kb on - strand, within Echvi_4396 at 5256.028 kb on - strand, within Echvi_4396 at 5256.073 kb on - strand, within Echvi_4396 at 5256.073 kb on - strand, within Echvi_4396 at 5256.116 kb on - strand, within Echvi_4396 at 5256.131 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.185 kb on - strand, within Echvi_4396 at 5256.188 kb on - strand, within Echvi_4396 at 5256.250 kb on + strand, within Echvi_4396 at 5256.253 kb on - strand, within Echvi_4396 at 5256.300 kb on - strand, within Echvi_4396 at 5256.303 kb on - strand, within Echvi_4396 at 5256.319 kb on + strand, within Echvi_4396 at 5256.319 kb on + strand, within Echvi_4396
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl beta-D-glucopyranoside (C) remove 5,254,087 - -0.4 5,254,105 - -0.4 5,255,363 - +0.3 5,255,369 - -0.6 5,255,369 - +0.0 5,255,552 - Echvi_4396 0.11 -1.2 5,255,612 - Echvi_4396 0.17 -0.1 5,255,644 - Echvi_4396 0.19 +1.1 5,255,644 - Echvi_4396 0.19 -0.5 5,255,663 - Echvi_4396 0.21 -0.8 5,255,683 - Echvi_4396 0.23 -0.1 5,255,765 - Echvi_4396 0.30 -0.4 5,255,765 - Echvi_4396 0.30 -0.3 5,255,839 - Echvi_4396 0.36 -1.1 5,255,841 - Echvi_4396 0.36 -1.0 5,255,841 - Echvi_4396 0.36 -0.5 5,255,860 - Echvi_4396 0.38 -0.7 5,255,889 + Echvi_4396 0.41 +0.1 5,255,893 - Echvi_4396 0.41 -0.4 5,255,914 + Echvi_4396 0.43 -1.6 5,255,941 + Echvi_4396 0.45 -1.9 5,255,942 - Echvi_4396 0.45 -0.5 5,255,948 - Echvi_4396 0.46 -1.0 5,255,956 - Echvi_4396 0.46 -0.7 5,255,961 - Echvi_4396 0.47 +0.4 5,255,961 - Echvi_4396 0.47 -0.8 5,255,961 - Echvi_4396 0.47 -1.4 5,255,986 - Echvi_4396 0.49 +0.9 5,256,021 - Echvi_4396 0.52 +0.0 5,256,021 - Echvi_4396 0.52 -0.4 5,256,027 + Echvi_4396 0.53 +0.1 5,256,028 - Echvi_4396 0.53 +0.6 5,256,028 - Echvi_4396 0.53 +0.3 5,256,073 - Echvi_4396 0.56 -0.6 5,256,073 - Echvi_4396 0.56 +0.1 5,256,116 - Echvi_4396 0.60 -0.7 5,256,131 - Echvi_4396 0.61 -0.4 5,256,185 - Echvi_4396 0.66 -0.5 5,256,185 - Echvi_4396 0.66 -0.9 5,256,185 - Echvi_4396 0.66 -0.9 5,256,188 - Echvi_4396 0.66 -0.5 5,256,250 + Echvi_4396 0.72 -1.0 5,256,253 - Echvi_4396 0.72 -0.4 5,256,300 - Echvi_4396 0.76 -0.8 5,256,303 - Echvi_4396 0.76 -0.3 5,256,319 + Echvi_4396 0.78 +1.2 5,256,319 + Echvi_4396 0.78 -0.3
Or see this region's nucleotide sequence