Experiment: Methyl alpha-D-glucopyranoside (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_3067 and Echvi_3068 are separated by 462 nucleotides Echvi_3068 and Echvi_3069 overlap by 47 nucleotides
Echvi_3067: Echvi_3067 - Prolyl oligopeptidase family., at 3,660,923 to 3,663,748
_3067
Echvi_3068: Echvi_3068 - hypothetical protein, at 3,664,211 to 3,664,447
_3068
Echvi_3069: Echvi_3069 - hypothetical protein, at 3,664,401 to 3,664,997
_3069
Position (kb)
3660
3661
3662
3663
3664 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3659.982 kb on + strand at 3659.982 kb on + strand at 3660.018 kb on - strand at 3660.018 kb on - strand at 3660.018 kb on - strand at 3660.018 kb on - strand at 3660.018 kb on - strand at 3660.018 kb on - strand at 3660.032 kb on - strand at 3660.032 kb on - strand at 3660.269 kb on - strand at 3660.269 kb on - strand at 3660.269 kb on - strand at 3660.286 kb on - strand at 3660.286 kb on - strand at 3660.286 kb on - strand at 3660.564 kb on - strand at 3660.586 kb on + strand at 3660.586 kb on + strand at 3660.586 kb on + strand at 3660.609 kb on + strand at 3660.609 kb on + strand at 3660.609 kb on + strand at 3660.609 kb on + strand at 3660.609 kb on + strand at 3660.610 kb on - strand at 3660.657 kb on + strand at 3660.658 kb on - strand at 3660.712 kb on + strand at 3660.734 kb on + strand at 3660.734 kb on + strand at 3660.734 kb on + strand at 3660.743 kb on - strand at 3660.745 kb on + strand at 3660.792 kb on + strand at 3660.806 kb on + strand at 3660.816 kb on + strand at 3660.816 kb on + strand at 3660.817 kb on - strand at 3660.841 kb on + strand at 3660.848 kb on + strand at 3660.860 kb on - strand at 3660.862 kb on - strand at 3660.862 kb on - strand at 3660.920 kb on + strand at 3660.920 kb on + strand at 3660.928 kb on + strand at 3660.942 kb on + strand at 3660.942 kb on + strand at 3660.943 kb on - strand at 3660.943 kb on - strand at 3660.966 kb on + strand at 3660.967 kb on - strand at 3660.998 kb on - strand at 3661.164 kb on - strand at 3661.234 kb on + strand, within Echvi_3067 at 3661.283 kb on - strand, within Echvi_3067 at 3661.390 kb on + strand, within Echvi_3067 at 3661.447 kb on + strand, within Echvi_3067 at 3661.447 kb on + strand, within Echvi_3067 at 3661.448 kb on - strand, within Echvi_3067 at 3661.562 kb on + strand, within Echvi_3067 at 3661.569 kb on - strand, within Echvi_3067 at 3661.591 kb on + strand, within Echvi_3067 at 3661.592 kb on - strand, within Echvi_3067 at 3661.671 kb on - strand, within Echvi_3067 at 3661.752 kb on - strand, within Echvi_3067 at 3661.752 kb on - strand, within Echvi_3067 at 3661.772 kb on - strand, within Echvi_3067 at 3661.846 kb on + strand, within Echvi_3067 at 3661.846 kb on + strand, within Echvi_3067 at 3661.847 kb on - strand, within Echvi_3067 at 3661.910 kb on + strand, within Echvi_3067 at 3661.936 kb on + strand, within Echvi_3067 at 3661.937 kb on - strand, within Echvi_3067 at 3661.937 kb on - strand, within Echvi_3067 at 3661.937 kb on - strand, within Echvi_3067 at 3661.937 kb on - strand, within Echvi_3067 at 3661.937 kb on - strand, within Echvi_3067 at 3662.049 kb on + strand, within Echvi_3067 at 3662.058 kb on - strand, within Echvi_3067 at 3662.065 kb on + strand, within Echvi_3067 at 3662.142 kb on + strand, within Echvi_3067 at 3662.143 kb on - strand, within Echvi_3067 at 3662.143 kb on - strand, within Echvi_3067 at 3662.181 kb on - strand, within Echvi_3067 at 3662.182 kb on + strand, within Echvi_3067 at 3662.209 kb on + strand, within Echvi_3067 at 3662.210 kb on - strand, within Echvi_3067 at 3662.214 kb on - strand, within Echvi_3067 at 3662.275 kb on + strand, within Echvi_3067 at 3662.297 kb on + strand, within Echvi_3067 at 3662.297 kb on + strand, within Echvi_3067 at 3662.297 kb on + strand, within Echvi_3067 at 3662.298 kb on - strand, within Echvi_3067 at 3662.298 kb on - strand, within Echvi_3067 at 3662.298 kb on - strand, within Echvi_3067 at 3662.309 kb on + strand, within Echvi_3067 at 3662.339 kb on + strand, within Echvi_3067 at 3662.339 kb on + strand, within Echvi_3067 at 3662.339 kb on + strand, within Echvi_3067 at 3662.340 kb on - strand, within Echvi_3067 at 3662.340 kb on - strand, within Echvi_3067 at 3662.340 kb on - strand, within Echvi_3067 at 3662.340 kb on - strand, within Echvi_3067 at 3662.344 kb on + strand, within Echvi_3067 at 3662.345 kb on - strand, within Echvi_3067 at 3662.378 kb on - strand, within Echvi_3067 at 3662.378 kb on - strand, within Echvi_3067 at 3662.380 kb on + strand, within Echvi_3067 at 3662.396 kb on + strand, within Echvi_3067 at 3662.419 kb on + strand, within Echvi_3067 at 3662.419 kb on + strand, within Echvi_3067 at 3662.532 kb on + strand, within Echvi_3067 at 3662.657 kb on - strand, within Echvi_3067 at 3662.684 kb on - strand, within Echvi_3067 at 3662.686 kb on + strand, within Echvi_3067 at 3662.687 kb on - strand, within Echvi_3067 at 3662.736 kb on - strand, within Echvi_3067 at 3662.771 kb on - strand, within Echvi_3067 at 3662.931 kb on + strand, within Echvi_3067 at 3662.931 kb on + strand, within Echvi_3067 at 3662.932 kb on - strand, within Echvi_3067 at 3662.945 kb on + strand, within Echvi_3067 at 3662.946 kb on - strand, within Echvi_3067 at 3662.946 kb on - strand, within Echvi_3067 at 3662.947 kb on + strand, within Echvi_3067 at 3662.993 kb on + strand, within Echvi_3067 at 3662.994 kb on - strand, within Echvi_3067 at 3663.000 kb on - strand, within Echvi_3067 at 3663.016 kb on + strand, within Echvi_3067 at 3663.029 kb on + strand, within Echvi_3067 at 3663.029 kb on + strand, within Echvi_3067 at 3663.030 kb on - strand, within Echvi_3067 at 3663.031 kb on + strand, within Echvi_3067 at 3663.032 kb on - strand, within Echvi_3067 at 3663.032 kb on - strand, within Echvi_3067 at 3663.032 kb on - strand, within Echvi_3067 at 3663.090 kb on - strand, within Echvi_3067 at 3663.112 kb on + strand, within Echvi_3067 at 3663.112 kb on + strand, within Echvi_3067 at 3663.116 kb on + strand, within Echvi_3067 at 3663.154 kb on + strand, within Echvi_3067 at 3663.154 kb on + strand, within Echvi_3067 at 3663.154 kb on + strand, within Echvi_3067 at 3663.154 kb on + strand, within Echvi_3067 at 3663.155 kb on - strand, within Echvi_3067 at 3663.155 kb on - strand, within Echvi_3067 at 3663.156 kb on + strand, within Echvi_3067 at 3663.208 kb on + strand, within Echvi_3067 at 3663.240 kb on - strand, within Echvi_3067 at 3663.252 kb on - strand, within Echvi_3067 at 3663.252 kb on - strand, within Echvi_3067 at 3663.311 kb on - strand, within Echvi_3067 at 3663.390 kb on + strand, within Echvi_3067 at 3663.391 kb on - strand, within Echvi_3067 at 3663.423 kb on - strand, within Echvi_3067 at 3663.512 kb on + strand at 3663.522 kb on + strand at 3663.523 kb on - strand at 3663.533 kb on - strand at 3663.533 kb on - strand at 3663.575 kb on + strand at 3663.575 kb on + strand at 3663.576 kb on - strand at 3663.682 kb on - strand at 3663.754 kb on + strand at 3663.754 kb on + strand at 3663.758 kb on + strand at 3663.758 kb on + strand at 3663.759 kb on - strand at 3663.759 kb on - strand at 3663.759 kb on - strand at 3663.777 kb on + strand at 3663.794 kb on - strand at 3663.794 kb on - strand at 3663.860 kb on + strand at 3663.861 kb on - strand at 3663.861 kb on - strand at 3664.013 kb on - strand at 3664.236 kb on + strand, within Echvi_3068 at 3664.383 kb on + strand, within Echvi_3068 at 3664.441 kb on + strand at 3664.442 kb on - strand at 3664.445 kb on + strand at 3664.446 kb on - strand at 3664.450 kb on + strand at 3664.465 kb on + strand, within Echvi_3069 at 3664.466 kb on - strand, within Echvi_3069 at 3664.468 kb on + strand, within Echvi_3069 at 3664.469 kb on - strand, within Echvi_3069 at 3664.525 kb on + strand, within Echvi_3069 at 3664.526 kb on - strand, within Echvi_3069 at 3664.530 kb on + strand, within Echvi_3069 at 3664.531 kb on - strand, within Echvi_3069 at 3664.546 kb on + strand, within Echvi_3069 at 3664.547 kb on - strand, within Echvi_3069 at 3664.602 kb on - strand, within Echvi_3069 at 3664.602 kb on - strand, within Echvi_3069 at 3664.604 kb on + strand at 3664.605 kb on - strand, within Echvi_3069 at 3664.605 kb on - strand, within Echvi_3069 at 3664.623 kb on + strand, within Echvi_3069 at 3664.624 kb on - strand, within Echvi_3069 at 3664.624 kb on - strand, within Echvi_3069 at 3664.625 kb on + strand, within Echvi_3069 at 3664.625 kb on + strand, within Echvi_3069 at 3664.626 kb on - strand, within Echvi_3069 at 3664.626 kb on - strand, within Echvi_3069 at 3664.629 kb on - strand, within Echvi_3069 at 3664.633 kb on + strand, within Echvi_3069 at 3664.633 kb on + strand, within Echvi_3069 at 3664.681 kb on - strand, within Echvi_3069 at 3664.681 kb on - strand, within Echvi_3069 at 3664.699 kb on + strand, within Echvi_3069 at 3664.733 kb on + strand, within Echvi_3069 at 3664.747 kb on + strand, within Echvi_3069
Per-strain Table
Position Strand Gene LocusTag Fraction Methyl alpha-D-glucopyranoside (C) remove 3,659,982 + +1.1 3,659,982 + -0.3 3,660,018 - +0.3 3,660,018 - +0.9 3,660,018 - -0.5 3,660,018 - -1.6 3,660,018 - +0.4 3,660,018 - -0.1 3,660,032 - -0.2 3,660,032 - +0.5 3,660,269 - +0.3 3,660,269 - -2.9 3,660,269 - -0.6 3,660,286 - -0.6 3,660,286 - -1.0 3,660,286 - +1.4 3,660,564 - +0.2 3,660,586 + +1.4 3,660,586 + +0.1 3,660,586 + +1.1 3,660,609 + +0.4 3,660,609 + +0.4 3,660,609 + -3.1 3,660,609 + +1.2 3,660,609 + +0.3 3,660,610 - +0.2 3,660,657 + +1.9 3,660,658 - -0.1 3,660,712 + +1.7 3,660,734 + -0.6 3,660,734 + -0.7 3,660,734 + +0.0 3,660,743 - +0.1 3,660,745 + +0.1 3,660,792 + -1.6 3,660,806 + -0.5 3,660,816 + +0.0 3,660,816 + +1.2 3,660,817 - +0.4 3,660,841 + -0.4 3,660,848 + -0.3 3,660,860 - +0.3 3,660,862 - -0.3 3,660,862 - -0.6 3,660,920 + +0.4 3,660,920 + -0.1 3,660,928 + +0.1 3,660,942 + -1.1 3,660,942 + -0.1 3,660,943 - +0.1 3,660,943 - +0.5 3,660,966 + +0.3 3,660,967 - +0.3 3,660,998 - +0.8 3,661,164 - +0.0 3,661,234 + Echvi_3067 0.11 +0.2 3,661,283 - Echvi_3067 0.13 -0.1 3,661,390 + Echvi_3067 0.17 -0.8 3,661,447 + Echvi_3067 0.19 +0.1 3,661,447 + Echvi_3067 0.19 +0.2 3,661,448 - Echvi_3067 0.19 -0.6 3,661,562 + Echvi_3067 0.23 +0.8 3,661,569 - Echvi_3067 0.23 +0.3 3,661,591 + Echvi_3067 0.24 -0.4 3,661,592 - Echvi_3067 0.24 +0.0 3,661,671 - Echvi_3067 0.26 -0.1 3,661,752 - Echvi_3067 0.29 +0.7 3,661,752 - Echvi_3067 0.29 +0.2 3,661,772 - Echvi_3067 0.30 +0.5 3,661,846 + Echvi_3067 0.33 +1.2 3,661,846 + Echvi_3067 0.33 -0.3 3,661,847 - Echvi_3067 0.33 +0.3 3,661,910 + Echvi_3067 0.35 +0.9 3,661,936 + Echvi_3067 0.36 -0.0 3,661,937 - Echvi_3067 0.36 +0.2 3,661,937 - Echvi_3067 0.36 -0.4 3,661,937 - Echvi_3067 0.36 -0.5 3,661,937 - Echvi_3067 0.36 +0.3 3,661,937 - Echvi_3067 0.36 +1.3 3,662,049 + Echvi_3067 0.40 +0.2 3,662,058 - Echvi_3067 0.40 -0.2 3,662,065 + Echvi_3067 0.40 +0.4 3,662,142 + Echvi_3067 0.43 +0.7 3,662,143 - Echvi_3067 0.43 +0.9 3,662,143 - Echvi_3067 0.43 -0.1 3,662,181 - Echvi_3067 0.45 +0.4 3,662,182 + Echvi_3067 0.45 -0.2 3,662,209 + Echvi_3067 0.46 +0.3 3,662,210 - Echvi_3067 0.46 +2.3 3,662,214 - Echvi_3067 0.46 -0.3 3,662,275 + Echvi_3067 0.48 +0.4 3,662,297 + Echvi_3067 0.49 -0.6 3,662,297 + Echvi_3067 0.49 +1.3 3,662,297 + Echvi_3067 0.49 +0.5 3,662,298 - Echvi_3067 0.49 -0.3 3,662,298 - Echvi_3067 0.49 +0.0 3,662,298 - Echvi_3067 0.49 +0.1 3,662,309 + Echvi_3067 0.49 -0.1 3,662,339 + Echvi_3067 0.50 +0.2 3,662,339 + Echvi_3067 0.50 -0.6 3,662,339 + Echvi_3067 0.50 -0.3 3,662,340 - Echvi_3067 0.50 +0.6 3,662,340 - Echvi_3067 0.50 +0.6 3,662,340 - Echvi_3067 0.50 +1.3 3,662,340 - Echvi_3067 0.50 +0.8 3,662,344 + Echvi_3067 0.50 -0.1 3,662,345 - Echvi_3067 0.50 +0.5 3,662,378 - Echvi_3067 0.51 -0.3 3,662,378 - Echvi_3067 0.51 -0.9 3,662,380 + Echvi_3067 0.52 +0.1 3,662,396 + Echvi_3067 0.52 -1.1 3,662,419 + Echvi_3067 0.53 -1.3 3,662,419 + Echvi_3067 0.53 -1.3 3,662,532 + Echvi_3067 0.57 +0.7 3,662,657 - Echvi_3067 0.61 +1.2 3,662,684 - Echvi_3067 0.62 +0.4 3,662,686 + Echvi_3067 0.62 -0.1 3,662,687 - Echvi_3067 0.62 -1.5 3,662,736 - Echvi_3067 0.64 -0.5 3,662,771 - Echvi_3067 0.65 -0.5 3,662,931 + Echvi_3067 0.71 +1.2 3,662,931 + Echvi_3067 0.71 +0.1 3,662,932 - Echvi_3067 0.71 +0.3 3,662,945 + Echvi_3067 0.72 +0.2 3,662,946 - Echvi_3067 0.72 -0.3 3,662,946 - Echvi_3067 0.72 -1.1 3,662,947 + Echvi_3067 0.72 +0.6 3,662,993 + Echvi_3067 0.73 +0.6 3,662,994 - Echvi_3067 0.73 -2.6 3,663,000 - Echvi_3067 0.73 +0.4 3,663,016 + Echvi_3067 0.74 -0.9 3,663,029 + Echvi_3067 0.75 -1.0 3,663,029 + Echvi_3067 0.75 +0.6 3,663,030 - Echvi_3067 0.75 +0.4 3,663,031 + Echvi_3067 0.75 -0.7 3,663,032 - Echvi_3067 0.75 +0.5 3,663,032 - Echvi_3067 0.75 +1.9 3,663,032 - Echvi_3067 0.75 +1.7 3,663,090 - Echvi_3067 0.77 +0.3 3,663,112 + Echvi_3067 0.77 -1.0 3,663,112 + Echvi_3067 0.77 +1.2 3,663,116 + Echvi_3067 0.78 +0.4 3,663,154 + Echvi_3067 0.79 +0.2 3,663,154 + Echvi_3067 0.79 +0.9 3,663,154 + Echvi_3067 0.79 +0.1 3,663,154 + Echvi_3067 0.79 -0.8 3,663,155 - Echvi_3067 0.79 -1.0 3,663,155 - Echvi_3067 0.79 +0.0 3,663,156 + Echvi_3067 0.79 +0.2 3,663,208 + Echvi_3067 0.81 +0.0 3,663,240 - Echvi_3067 0.82 +0.2 3,663,252 - Echvi_3067 0.82 +1.1 3,663,252 - Echvi_3067 0.82 +1.3 3,663,311 - Echvi_3067 0.85 +0.3 3,663,390 + Echvi_3067 0.87 +0.1 3,663,391 - Echvi_3067 0.87 +0.6 3,663,423 - Echvi_3067 0.88 +1.8 3,663,512 + +0.3 3,663,522 + +2.6 3,663,523 - -0.5 3,663,533 - +0.7 3,663,533 - +1.1 3,663,575 + +0.4 3,663,575 + -0.2 3,663,576 - +0.2 3,663,682 - +0.1 3,663,754 + -1.1 3,663,754 + -0.0 3,663,758 + +0.5 3,663,758 + +0.2 3,663,759 - -1.0 3,663,759 - +0.5 3,663,759 - +0.1 3,663,777 + -1.3 3,663,794 - +0.6 3,663,794 - +0.9 3,663,860 + +1.7 3,663,861 - +0.4 3,663,861 - +0.4 3,664,013 - -1.0 3,664,236 + Echvi_3068 0.11 -2.4 3,664,383 + Echvi_3068 0.73 -1.2 3,664,441 + +0.5 3,664,442 - -0.6 3,664,445 + -0.4 3,664,446 - -0.3 3,664,450 + +0.7 3,664,465 + Echvi_3069 0.11 +0.6 3,664,466 - Echvi_3069 0.11 -0.3 3,664,468 + Echvi_3069 0.11 +0.3 3,664,469 - Echvi_3069 0.11 +0.1 3,664,525 + Echvi_3069 0.21 +1.6 3,664,526 - Echvi_3069 0.21 +0.6 3,664,530 + Echvi_3069 0.22 -0.6 3,664,531 - Echvi_3069 0.22 -1.9 3,664,546 + Echvi_3069 0.24 +1.0 3,664,547 - Echvi_3069 0.24 +0.3 3,664,602 - Echvi_3069 0.34 +0.2 3,664,602 - Echvi_3069 0.34 -0.3 3,664,604 + -0.4 3,664,605 - Echvi_3069 0.34 -0.5 3,664,605 - Echvi_3069 0.34 +0.4 3,664,623 + Echvi_3069 0.37 -0.1 3,664,624 - Echvi_3069 0.37 +0.5 3,664,624 - Echvi_3069 0.37 +0.7 3,664,625 + Echvi_3069 0.38 -0.2 3,664,625 + Echvi_3069 0.38 -2.1 3,664,626 - Echvi_3069 0.38 -0.0 3,664,626 - Echvi_3069 0.38 +0.3 3,664,629 - Echvi_3069 0.38 -1.2 3,664,633 + Echvi_3069 0.39 -0.7 3,664,633 + Echvi_3069 0.39 -0.0 3,664,681 - Echvi_3069 0.47 -0.2 3,664,681 - Echvi_3069 0.47 +0.2 3,664,699 + Echvi_3069 0.50 -0.8 3,664,733 + Echvi_3069 0.56 -0.1 3,664,747 + Echvi_3069 0.58 -0.2
Or see this region's nucleotide sequence